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KEGG   Poecilia mexicana (shortfin molly): 106908799
Entry
106908799         CDS       T08022                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
pmei  Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pmei04040]
    106908799
Ion channels [BR:pmei04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   106908799
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel IQ_SCN5A_C GPHH DUF5580 IQ
Other DBs
NCBI-GeneID: 106908799
NCBI-ProteinID: XP_014830865
Position
Unknown
AA seq 1655 aa
MAPLLPPVGTEVFRRFTPASLEEIQRKHEAEAKQQQIRKEKNIKIAKKYLPKPAGDLEDG
KPLPLFYGDRAQEFLNVPLEDMDPFYQSHKTFIVLSKDKIIYRFNGEPACYLLSPSNPLR
MFSIRILIHSLFSFFIIATILTDCVFLAMSDPPEWSKTVEYVVMVIYTFEVIIKVLSRGF
CVGNFTFLRNPWNWLDFMVISMIYLAEFVPSENVSALRPFRVLRVLKIITVFSGLRTTFG
AVIQSMKKLRDVMILTFFFVSVFALIGFQLFMGNLRQKCVLTLSSNSNTSGAFNISSHGN
NSSDFDFYTHINNPDNYYHLPGQLDALLCGNSSDSGTCPDGYMCLKAGRNPNYGYTSYDS
FGWAFLSLFRLVTQDFWENLFHLTLRAAGKTYTIFFVVVIFLGSFYLINLILAVVIMAYA
EQNRANITKAKQREKEYARILKELKKREEKVQCNGGKASITFQYKAECLFSLHQTVKRAG
PLEKNGSASQSHEEDTTTDDLEDNQEPRSSRRHVVADTFLKWDCCGCWRWLKKLLHTIVM
DPFVDITIIVLYIILMATEHYPMTPEFYELINTGNLVLTGILIAEMVLKILAMDPYHYFQ
EGWNIFDSIVVAMSLVDLGLANVHRLAVWRPLRLIRVFKLAKSWPAFNMLIKIIRNSLRA
LVNLTLVLAIIVFLFTVFGMQLFGKSYKDSVCRIAIDCELPRWHMNDFFHAFLVIFRILC
GEWIETMWDCMEVAGKPMCLIVFMMVLVIGKLVVLNLFLALLLSSFSGDNLAVTEDEGEN
NLQIAINRISRGTARTKAWFWTLLGKKTNVNSDVNDVTCEEGDKSKEVLPLTIVNSEQSV
VKVQDSTVTKICFEAKSDSEISKNKDGEDNEEDDQDEQLAQGGKSLDCSDTERFPVISVI
KEVEDTPDDCFTEKCYSCCPCLDIDTSQTIGRIWLYIRKTSIAIVESKYFKSFIIIMILL
SSAVLAFEDIYIEQRRDIKIILDYADQVFNFVFVVEIIFKLVAYGCKSFFSNAWCWLDFL
IADVSLVLLSANILGYSELGAIQSLRTLRALRPLRVLSCFEGLRVVVNALVGAIPSIFNV
LLVCLVLWLIFSIMGVNLFAGKFYYCFNETSEEYFSPEEVNNKSQCFDLIEENFSEVRWR
NTKLNFDNVGMGFLSLLQVATFKGWLDIMYAAVDSTEMESQPAYEHSLYKYMYFVCFVIF
GSFFPFCLFITSLINFNQRKPKPVEIEPPIKWIPREPPSRPTNKFQGLVFDLVTNPFFDM
LIMVLIGLYTLMMMVETDEQSPKMEEILYWVNLVFIMIFSIECCLKMIALRKHYFNVGWN
IFDLVVVLLSVVGFLLADIIEKYFVSPTLFRVIRLARIGLILRLIRRAKGIRKLLFALRK
SLPAVFNLCILLFIIMFVFAIFGMSNFAYVKKGFMIDDIVNFETFGNSMISMFTITTLAG
WDGLLYPIMNTPPDCDPGFENPGTSVRGNCGSPAAGIVFLTSYVIVSFLVVVNIYITIIL
EIFNVATEESADPLSEDDFDMFYKTWEKFDPRASQFIHYSELSDLCDALQDPLRIPKPNT
INLLQMDLPLVQGDRVHCLDVLIALTEEVFGESQATEELKSTMEWTFMANVASEESLRPI
VSTFRKKHEEMAATAIQRAYRRHVQQRVNKQESYQ
NT seq 4968 nt   +upstreamnt  +downstreamnt
atggcccctctgctgcccccagttggtacggaggtgtttagacgcttcacaccagcctca
ttggaggaaattcagcgtaagcatgaagctgaagcgaagcagcagcaaatcagaaaggaa
aagaacatcaagatagcaaagaagtatcttcctaaaccagcaggtgacctggaggatggg
aagcccctcccgttgttctatggagaccgggcccaggagtttctcaacgtcccattggag
gacatggatcccttctaccaatcacacaagacctttattgttctcagtaaagacaaaatc
atctacaggttcaacggagaaccagcttgttacctgctgagtccctccaaccctctgagg
atgttctccatcaggatcctcatccattctttattcagttttttcatcatagcgactatc
ctgaccgactgtgtgttcctggccatgagtgaccctccagaatggagcaagacagtggaa
tatgtggtcatggtgatctacacgtttgaggtaatcatcaaagttttatccagagggttc
tgtgtgggaaacttcaccttcctcagaaacccgtggaactggctggacttcatggtcatc
agcatgatatacctagcagagtttgtcccctctgaaaatgtatcagcactgaggccattc
agagttcttcgagtcctgaaaatcatcacagtattctctggcttaaggacaacctttggt
gctgtcatccagtcaatgaagaagctgcgtgatgtcatgattctgaccttcttttttgtc
agtgtctttgctctgattggttttcagctttttatgggaaacctcagacaaaaatgcgtt
ttgaccctatcaagcaatagcaacacatcaggagccttcaacatcagttcccacggaaac
aacagcagcgactttgatttctacacacacattaacaacccagacaattattaccaccta
cctggtcaacttgatgctctgctgtgtggaaacagctctgattcagggacctgtccagat
ggatacatgtgtctgaaggcagggagaaacccaaactatgggtataccagctacgacagt
tttggttgggcgtttctgtctctgttcagactcgtgacccaggacttctgggaaaacctc
ttccacctgacgctgcgagctgcaggtaaaacctacaccatcttcttcgtggtcgtcatc
ttccttggttccttctacctcattaatctcatcctggcggtggttatcatggcgtacgct
gagcaaaacagggctaacatcaccaaggccaaacagagagaaaaggagtatgcccgcatc
cttaaggagttaaagaagagagaagagaaggtacaatgtaatggagggaaagcttccatc
acgtttcagtacaaagctgaatgtttgttttctttacatcagacggtcaagagggcgggg
cccttggagaaaaacggctctgcatctcagagccatgaggaagatactaccacggatgac
cttgaggacaaccaggagccacgttcttcacgccgccacgtcgttgctgacaccttcctg
aagtgggattgttgtggctgttggagatggttaaaaaagcttctgcatactattgtcatg
gatccatttgtggacatcaccatcattgtcctctacattatcttgatggccactgagcac
tatccgatgactccggagttttatgagcttatcaacactggaaacctggtgcttacaggg
atcttaatagctgagatggttctcaaaattctggcgatggatccatatcattactttcag
gaaggctggaatatctttgacagcattgtcgtcgccatgagtctggtggatctaggactg
gctaatgttcatagactagctgtgtggcggcccctcagattgataagagtgtttaagcta
gccaagtcgtggccagctttcaacatgttgataaagatcatccgcaactctttgagagcc
ctggtgaacttgacgctggttctcgccatcattgtcttcctcttcactgtatttgggatg
cagttgtttggaaagagctacaaagacagtgtctgccgcattgcaatagactgtgagctt
cctcgctggcacatgaacgacttctttcatgccttcctcgtcatcttcaggattctgtgt
ggcgagtggatcgagacaatgtgggactgtatggaagttgcagggaagcctatgtgtctg
attgtcttcatgatggtactggtgattggaaaactagtggtcctgaatctgttcctggcc
ttgctgctaagctcgttcagtggggacaatcttgcagttacagaagatgaaggagaaaac
aatctccagattgccataaaccggatcagcaggggtacagcaaggaccaaggcctggttc
tggactttgctgggaaagaaaacaaacgtaaactcagatgtaaatgatgtaacctgtgaa
gaaggggacaaatcaaaggaagttttacctctgacaatcgtgaattcagagcagtcggtg
gtaaaagtccaagactccacagtaaccaaaatctgctttgaagccaagtctgactctgag
atatctaaaaataaagatggagaagataatgaggaggatgatcaagatgaacagcttgca
caaggtggtaagtctttggactgcagtgacaccgagagatttcctgtaatctcagtcata
aaagaggtagaagacactcctgatgactgtttcacagaaaagtgttacagttgctgtcca
tgcctggacatagacacgtcccagaccatcggaaggatctggttatatatcaggaaaact
tccatcgccatcgtagagtccaagtactttaagtcattcatcatcatcatgatcctgctg
agcagtgcagtcctggcctttgaggacatctacattgagcagcgccgggacatcaagata
attcttgactatgcagatcaggttttcaactttgtgtttgtggtggagataattttcaag
ttggttgcctatgggtgtaaaagcttcttctccaatgcctggtgctggctggacttcctc
attgcagatgtgtctctggtgttgctgtcagcaaacatcctgggatactctgagctggga
gcaatccaatctctgaggactctgagagcattaaggcccctgagagtcttgtcttgcttt
gagggcctgagggtggtggttaatgcactggttggtgcaatcccctccatcttcaatgtg
ctgctggtctgtctggtcctctggctcatctttagcatcatgggtgtgaacctgtttgca
gggaagttttattactgcttcaacgaaacatcagaggagtatttctctcctgaggaagtc
aacaataaatcccagtgtttcgatctgattgaggaaaacttctccgaggttcgttggagg
aacacaaagctcaactttgacaacgttgggatgggcttcctgtctctgctgcaagtggcc
acatttaaaggctggctggacatcatgtatgcagcggtggactccacagagatggagtcc
cagccagcgtatgagcacagcctgtacaaatacatgtacttcgtctgcttcgtcatcttt
ggctccttctttcccttctgcctcttcatcacctcactcatcaacttcaaccagcgtaaa
ccaaagcctgtagaaatagaacccccgataaaatggatccccagagagcctccttcccga
ccaacaaacaagtttcagggtttagtcttcgaccttgtgaccaatccattttttgatatg
ctcatcatggtgttgatcggcctttatacgttgatgatgatggtggaaacagacgagcag
agtcctaagatggaagaaatcctgtactgggtcaacctcgttttcatcatgatcttcagc
atagagtgctgtctcaaaatgatcgctctacgaaagcactactttaatgtcggatggaac
atatttgaccttgtggtggttttactgtctgttgttggctttcttcttgccgatatcatc
gagaagtacttcgtttctcccactctattccgtgtgatccgactggctcgcattggcctg
atccttcgtctcattcgcagagcgaagggaattagaaagctgttgtttgcgttaaggaag
tctcttcctgctgttttcaacctatgcatcctcctcttcatcatcatgtttgtcttcgct
atctttgggatgtctaattttgcttacgtgaagaaggggttcatgattgatgacattgtt
aactttgagacctttgggaacagtatgatctccatgtttacgatcaccacattagctgga
tgggacggtcttctctatcccatcatgaacacacctccagactgtgatccaggctttgaa
aacccaggcacatctgttagaggaaactgtggcagccctgcagcaggcattgtcttcttg
acttcgtatgtcattgtgtcctttctggtggtggtcaatatatacatcaccatcatcctg
gagatatttaatgtcgccacagaggagagcgccgacccactttctgaggatgactttgat
atgttctataaaacctgggagaagtttgaccctcgagcttcgcaattcatacactacagt
gagctgtcagacctctgtgatgctctacaggatcctctcaggattcccaaacccaacacc
atcaacctgttgcaaatggacttgcctttggttcaaggagacagggtccactgtctggac
gtcctgatagctctcactgaagaggtttttggtgaatcccaggcaacagaggaactaaag
tctaccatggagtggacgttcatggccaacgttgcttcagaggagagtttaagaccaatc
gtcagcacctttcgaaagaaacacgaggagatggcagcgacagcgatccagagagcctac
aggagacacgttcagcagcgagtgaacaagcaggagtcctaccagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (11)   

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