[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Peromyscus leucopus (white-footed mouse): 114693506
Entry
114693506         CDS       T07241                                 
Symbol
Col6a5
Name
(RefSeq) collagen alpha-5(VI) chain
  KO
K06238  collagen type VI alpha
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Pathway
pleu04151  PI3K-Akt signaling pathway
pleu04510  Focal adhesion
pleu04512  ECM-receptor interaction
pleu04820  Cytoskeleton in muscle cells
pleu04974  Protein digestion and absorption
pleu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    114693506 (Col6a5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114693506 (Col6a5)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114693506 (Col6a5)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    114693506 (Col6a5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    114693506 (Col6a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pleu04147]
    114693506 (Col6a5)
   00536 Glycosaminoglycan binding proteins [BR:pleu00536]
    114693506 (Col6a5)
Exosome [BR:pleu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   114693506 (Col6a5)
Glycosaminoglycan binding proteins [BR:pleu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   114693506 (Col6a5)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   114693506 (Col6a5)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 Copine VWA_CoxE
Other DBs
NCBI-GeneID: 114693506
NCBI-ProteinID: XP_028725715
Position
7:complement(94587178..94686168)
AA seq 2643 aa
MKLQLIAFVLILWIETLADQSPGPGPEYADVVFLVDSSDDLGIKSFPFVRTFLNKLISSL
PIEADKYRVALAQYSDALYNEFQLGTFKNRNPMLNHLKKNFGFIGGSLKIGNALREAHRT
YFSASTNGRDKKQFPPILVVLASAESEDDVEEASKALREDGVKVISVGVKKASEENLKAM
ATAQFHFNLRTVRDLSLFAPNMTQIIKDVTKYREGTAVTLLTPEAPTTPEAPATPEAPAT
PEAPATPEAPATAATNADKTVPFPISCQKDSLADIIFLVDESVGTTENLRDLQNFLENVT
SSVDVKDNCMRLGLMSYSDKVQTISSLKSSTNQSEFQQQIRKLSLRTGGSKVGAAIEQMR
REGFSESGGSRKAQGVPQIAVLVTNRPSDDAVRDAALDLRLDGVTMFALGVQGANSTQLE
DIVSYPSEQSISTHSSYRQLESYSRNFLKKIHNEVWTQVSTHAEQMELDKTGCVDTKEAD
IYFLIDGSTSIRKREFEQIQTFMSSVVDMFPIGPNKVRVGVVQYSHKNEVEFPISLYVDA
IALKKAIFNIKQLKGRTLTGKALDFILPIIKTGKSERTDEIPCYLIVLTDGKSEDSVLEP
ADRLRAERVTIHAVGIGEANRTQLQQIAGNDERVNFGQNFDSLKNIKNEIVHRICSEKGC
EDMKADIMFLVDSSGSIGPTNFETMKTFMKNLVGKIQIGANKTQVGVVQFSDYNREEFQL
NTFFTHKEIYAAIDRMSPINRNTLTGSALTFVKDYFDLAKGGRPQVRKFLILLTDGEAQD
KVGGPAMALRNKSVTIFSVGVYGANRAELEEISGDGSLVFHVENFDHLEAIESKLVFRVC
ALHDCKRIELLDIVFVLDHSGSIGPQEQESMINLTIHLVKKADVGRDRVQFGALKYSNNP
EILFYLNTYSSKSGIIEHLRRTRDTGGDTYTAKALEHSNILFTEEHGSRLKQNVRQLMIV
ITDGVSHDRHKLNDTAWRLRDKGITIFAVGVGNANQDELETMAGKKENTIHVDNFDKLRD
IYLPLQETLCNNSQETCNLQEADVIFLCDGSDMVSDSEFVTMTTFLSDLIDNFDIQSQRM
KIGMAQYGSRYQEIIELESSLNKTQWKSRIQTMAKSKGFPRIDFALKHVSHMFHPSVGGR
KNAGVPQMLVVITSGYPRYDVADAVKVLKDLGICVLALGIGDVYKEQLLPITGNPEKIIA
FQDFNRLKSVDVKKRMVREICQSCGKANCFVDVVIGFDISTHHEGQPLFQGHPRLESYLP
NILEDITSIRGVSCGAGAEAQVSLAFKVNNDQEFPAKFQIYQKAVFDSLLQVTVRGPTHL
NAQLLQSLWDVFEEKSASRGQVMLIFSDGLQGESITTLEQQSDRLREAGLDALLVVSLNA
LAQDEFSSFEFGKGFDYRTHLTIGMTDLGKKLSQYLGNIAERACCCTFCKCPGIPGPHGT
RGLQASKGSSGLKGGRGYRGEDGDPGRRGEIGPQGDRGIIGCPGTRGQKGVKGFAGAQGE
HGEHGLDGLDGEDGFYGLRGMKGEKGDLGSQGSPGSRGAPGEDGEKGFPGDPGNPGRDST
IKGQKGHKGDQGTQNWVEGTQGSPSSRGSRGMEGRRGLRGPSGEAGNPGPQGAQGPEGLQ
GPQGSSGNPGEKGEKGDQGHQGPQGAPGPAGSRGSIGRPGLWGRKGEPGVPGGPGPVGPP
GQRGERGDHGIPGYGQMGRQGVKGPTGFPGDPGQKGDAGDPGVPGGPGPKGFKGLTLSQG
LKGESGLQGSQGPPGRRGPKGTAGQPMYSPCDLMQFLWNHSSCWKEKCPVYPTELVFALD
QSSGITERRFNETRDTISSIVRDLNIRENNCPVGARVAVVSYDSDTSYLIRGSDYRNKKH
LLQLLSQIKYQVPQKARDIGNAMRFVARNVFKRTSSGTNVRRVAVFFSNGQSASRGAILT
ATMEFSALDISLAVFAYNERVFLDDAFGFDDTGTFQVIPVPPVGNYEPLERLRRCTLCYD
KCFPNTCAEETSFPENSYMDVAFLLDNSHNIAKDDFQAMKALVSSAINGFHITSNPSASG
SGDRIALLSYSPSESSRKKSRVKTEFEFTTYDHQSIMKDYIHTSLQQLNGDATIGLGLQW
AMEGLFPGTPNPRKHKVIIVISAGENHEEKEFVKTVALRAKCQGYVIFVVSLGSTQTDEM
EQLASYPHDHHLIQLGRMHKPDLNYIVKFLKPFVYFVRRGFNQYPPPMLEGDCRRLGVER
GDVLLSSLRLTTELHEVSAIENSLLGQELSAGTDSSFMLEDDRGDHLVYIPNQMLEPHTL
VTHYGDDHGSEAMASLTSEHENHGRKELGLADEPEDASLQEYYMDVAFLIDASQRVGNDL
FKEVRALITSVLDYFYIAPDPLTSVLGDRVAVLTYSPPGYLPNSEECPVYLEFDLVTYHS
VHQMKHHLQESLKQLNGDVFIGHALQWTIDNVFVGTPNLRKNKVIFIISAGETSSLDKEV
LRNASLRAKCQGYSIFVFSFGPVHNDMELEELASQPLDHHLVQLGRIHKPDLDYIIKFVK
PFVHSIRRAINKYPTTDLQAKCANTTFPSTEKAGTEDSLLLIPEVYKIEAGDSELFGDSH
PQEQHFFVLGDNHSNDSGITADLIQKLYALFSSGELMVNDKEEPHLEEAAAPANDKQDGE
DAR
NT seq 7932 nt   +upstreamnt  +downstreamnt
atgaagctccagctaattgcatttgtcctaatcctctggattgaaacactggcagatcag
agcccagggccaggccccgagtatgcagatgtggtgtttctggtggacagctctgatgac
ctggggattaaatccttcccatttgtgagaactttcctcaacaagctgatcagcagcctc
cccatcgaggccgacaagtaccgtgtggccctggctcagtacagcgatgctctctacaac
gagttccagctgggcaccttcaagaacaggaaccccatgctgaaccacctgaagaagaac
ttcgggttcatcggtgggtccctgaagatagggaacgccctgcgagaggctcacaggacc
tatttctctgcatccacaaatggaagagacaagaaacagttccccccaatcctggtggtg
ctggcttcagccgagtctgaggatgatgtggaagaggcttcgaaagccctgcgggaagat
ggggtgaaagtcatctcggtgggggtgaagaaggcttctgaggaaaacctgaaggccatg
gccacagcccagttccacttcaacctcaggactgtcagagacctcagtttgtttgcccca
aacatgacgcagatcatcaaggacgtgactaagtacagggaaggaacagctgtgaccctt
ctcacacctgaagccccaactacacctgaagccccagccacacctgaagccccagccaca
cctgaagccccagccacacctgaagccccagccacagctgcaaccaatgctgataagaca
gttccctttcccatatcctgtcagaaagactccctggctgacattatattcttggtggac
gagtcagtggggaccacagaaaatctgagggacctgcagaacttcctggagaatgtcacc
agctctgtggatgtgaaggacaattgcatgcgacttggactgatgagctacagtgacaag
gttcagactatttcttccctgaagtcgagtaccaaccagtctgaattccagcagcaaatc
cgaaaactctccctccggactggggggtctaaagttggggctgccattgagcagatgaga
agagaaggcttctccgagtctggtggcagcagaaaggcacagggggtccctcagattgct
gtgctggtcaccaacagaccatcagatgatgccgtgagggatgctgcactcgaccttcgc
ttggatggtgtaactatgtttgctctgggtgtccaaggggccaacagcacacagttagaa
gacatagtatcctacccttctgagcagagcatttccacacacagctcctacagacagctg
gaatcgtacagtaggaacttcctgaagaagatccacaatgaagtctggacccaagtttcc
acccatgctgaacaaatggaacttgataaaactggctgtgtggacacaaaggaggctgat
atctatttcctcattgatggctcgaccagcatccgcaagagagagtttgagcaaatccag
acatttatgtcgtctgtggtagacatgtttcccattggtcccaacaaagtccgagttggc
gtcgtgcagtactcacataagaatgaagtggaattccccatctctctctacgtggatgcc
attgccttgaagaaggctattttcaacatcaagcaactcaaaggccgtaccctcactggg
aaagccctggatttcatactgccgataatcaagacggggaaatcggagaggacggatgaa
attccctgttacctcattgtactgactgacgggaagtcagaagacagcgttctagaacct
gccgacagactcagggctgaacgcgtcaccattcacgcggtggggattggcgaggcgaac
agaacccagctgcaacaaattgccggcaacgacgaaagggttaattttgggcagaatttt
gattctctaaagaacataaaaaatgaaattgttcacagaatctgctctgaaaaaggatgt
gaagacatgaaggctgacatcatgtttttagtggacagttctggaagcatagggcctaca
aattttgagacaatgaaaaccttcatgaaaaacctggtggggaagattcaaattggtgcc
aataaaacccaagtgggtgttgttcagttcagtgattataacagggaagaattccagctt
aatacattcttcacacacaaagaaatttatgccgcaatagacaggatgtcacccatcaac
agaaacactttgactggaagtgcgcttacctttgtaaaggactactttgaccttgccaag
gggggccgtccccaggtcagaaagtttctcatcctcctcacagatggagaagcccaagat
aaagtagggggtcccgccatggctctcaggaacaaaagtgtgaccatcttttctgtgggt
gtgtacggtgccaatagggctgagctggaggaaatcagtggggatggcagcctggttttc
catgttgagaactttgatcatctggaggcgatagagagtaagctcgtgttccgtgtgtgc
gctctacatgattgcaagaggatcgaactcttagacattgtgtttgtgctggaccattca
ggcagcataggaccacaagaacaagaaagcatgattaacctcaccatccacttggtgaag
aaggcggatgttggcagggaccgagtccagtttggagctctcaaatattccaacaatcca
gagatccttttctatcttaacacatactcaagcaaatcgggcatcattgagcacctgagg
aggaccagggacacaggaggggacacctacactgccaaggctcttgagcactccaacatc
ctgttcacagaggagcatggcagccgcctgaagcaaaatgtgagacagctgatgattgtc
atcacagatggtgtgtcccacgatcgacataaactcaacgacacagcatggagactaagg
gacaaaggcatcaccatcttcgcagtaggtgtaggaaatgccaaccaagatgaactggag
accatggcagggaagaaagaaaatactatccatgtagacaactttgacaagctgagagat
atttacctgcctctgcaagaaactctgtgcaataattcacaagagacctgtaaccttcag
gaagcagatgtgattttcctttgtgatggctctgacatggtgtctgattcagagtttgtt
accatgacaactttcttgtcagatttaattgataattttgacattcagtctcagagaatg
aaaatcgggatggctcaatacgggagccggtaccaggaaatcattgagttggagagctct
ctgaacaagactcagtggaagtctcgcatccaaaccatggccaagagcaaggggtttcca
cgaattgactttgctcttaagcatgtgagccacatgtttcatccctccgttggcgggagg
aagaatgctggtgtccctcaaatgttggttgtcatcacctctggttatcctcgctatgat
gtggcagatgcagttaaagtcctgaaagaccttggcatctgtgtcctggctttgggcata
ggagatgtttataaggaacaacttctgcccatcacaggcaatccagaaaaaatcattgct
ttccaagactttaatagactgaagagtgtggatgtgaagaaaagaatggtccgtgaaatc
tgccagagctgcgggaaagctaattgctttgtggacgtagtgatcgggtttgacatttcc
acccaccatgagggccagcctttgttccagggccatccccgcttagaatcatacctccca
aacatcttagaggacatcacctctatcagaggggtgagctgtggagcaggtgcagaggca
caggtgagcctggcctttaaggtgaacaatgaccaagagttccccgccaagttccaaatc
taccagaaagcagtgtttgacagcttgctgcaagtcaccgtccgtgggccaactcatctg
aacgcacagctcttgcagtcactgtgggacgtgtttgaagagaaatctgcatccaggggc
caggtgatgcttatcttctcagatggtctccagggcgagagcatcaccacactggaacag
cagtcagacaggctcagagaagcaggacttgatgctctgttggtggtgtcccttaatgca
ttagctcaggatgagttttccagctttgaatttggaaaaggatttgactacaggactcac
ctgaccattggaatgacagacctgggcaagaagctttcacagtatctgggaaacatcgca
gagagggcttgttgctgcacattttgtaaatgtccggggattccaggacctcatggaacc
cggggactccaagcctcaaagggttcttcaggcctgaaaggcggcagaggatacagagga
gaggatggagaccctggaagacgaggagaaattggacctcaaggagatagagggatcatc
gggtgtccggggactcgaggtcagaagggagtgaaaggatttgctggagctcagggagaa
cacggagaacatgggcttgatggactggatggagaagacggattttatggacttcgtggg
atgaagggagaaaaaggtgaccttggctctcagggcagcccaggttccagaggtgcccct
ggagaagatggagagaagggcttcccaggggatcccggtaacccaggacgagacagcacc
atcaaaggccagaagggccacaaaggagatcaaggaacacaaaactgggtggaagggaca
caaggcagtcctagctccagaggaagcaggggaatggaaggtcggaggggactccggggt
ccttcgggggaagcaggaaacccggggcctcaaggtgcacagggaccagaaggactgcaa
ggtccacaggggtccagtggaaatcctggcgagaaaggagaaaaaggagatcaagggcac
caggggcctcagggtgctcctgggccagcaggatctagggggagcattggaagacctggg
ctttgggggagaaagggggaacctggagttcctggaggcccaggaccagtaggaccccct
ggccagcgaggagaacggggagatcatggcatcccaggctatggccagatgggaagacaa
ggagtgaagggcccaacaggattccctggggacccagggcagaagggtgatgctggagat
cctggagttcctggggggcctggacccaaaggattcaagggactgacactctctcaaggc
ttgaaaggcgagagtgggcttcagggttctcaaggcccccccggacggagaggtcctaaa
ggcacagcagggcagcccatgtattccccctgtgatctgatgcagttcctgtggaaccat
agttcctgctggaaagaaaagtgccccgtgtatccaacagagctggtatttgccctggac
cagtcctctggtatcacagaaaggagattcaatgaaacaagagataccatcagttccatt
gtcagggacctcaacatcagggaaaataactgtcctgtaggagcgagggttgccgtggtt
tcctatgactcagataccagttacctcatccgtgggtctgactaccggaacaagaaacat
ctccttcagctcctttcccagataaaataccaagtcccccagaaagccagggacattggc
aacgcaatgaggtttgtggcccgcaatgttttcaagcggacatcttcgggaaccaatgtc
aggagagttgcagtgttcttcagtaatggccagtcagccagtagaggggccatcctcacg
gccaccatggagttcagtgccctggacatcagccttgcagtctttgcttataacgaaaga
gttttccttgatgatgcttttgggtttgatgacactgggacatttcaagtgattccggtt
cctccggttgggaattatgagcccctggaaagacttcggcgctgcacactttgctatgac
aagtgttttccaaatacttgtgcagaagagacttcctttcctgaaaattcatacatggat
gtagcattcctcttagacaattcccataatatagccaaagacgacttccaagccatgaaa
gctttggtgagctcagcgatcaatggcttccacatcacttcaaacccttcagcctcgggc
tctggtgacagaattgctttgctgagctattctccctcagagagttccagaaagaagagc
agggtgaagacagagtttgagtttacaacctacgaccaccaatccatcatgaaggactac
atccacacttccctccaacaactaaatggagatgccaccattggtcttggcctacagtgg
gccatggagggtctcttcccaggaacccccaatccaagaaaacacaaggtcatcattgtg
atttcagctggagagaatcatgaggagaaggaatttgtgaagactgtggctttgagggcc
aaatgtcaaggctatgtcatatttgtggtttctctgggctccacacaaacagatgagatg
gaacaattagccagctacccacatgatcaccatctgatacagcttgggagaatgcacaag
ccagatctgaattatattgtaaagtttctgaagccatttgtatactttgtcagacgtgga
ttcaatcagtacccaccgccgatgctggagggtgactgcaggcgtctcggtgtagagagg
ggagatgtgctgctcagcagcctccgattgactaccgagttgcatgaggtttctgcaatc
gagaacagccttcttggccaagagctgagtgctgggacagactcatcttttatgttggag
gatgatagaggtgaccatttggtttatattccaaaccaaatgctagagccacatacgcta
gtcactcactatggagacgatcatggatctgaagcaatggcaagtctcacttccgaacat
gaaaatcatggcagaaaagaactgggtcttgctgatgagcctgaggatgcttctcttcaa
gaatattacatggatgtggctttcctcatagatgcttctcagagagtaggaaatgatttg
tttaaggaagtgagagctcttataacttcagtactggattacttttacatcgccccagat
ccactgacctctgtcttaggagacagagtggctgtcctgacctactctcctccaggctac
ctgccaaactctgaggaatgcccagtctacctggaatttgatttggtcacttatcacagt
gtacaccaaatgaagcaccatctccaagagtctcttaagcagctcaatggagatgttttt
atcggccacgcccttcagtggacaattgacaatgtctttgtagggacccccaatctgagg
aaaaacaaagttatctttataatatctgcgggtgaaaccagttctttagacaaagaagtc
ttaaggaatgcatctctgagagccaagtgccaaggctactccatctttgtattttccttt
ggtcctgtacataatgacatggagttagaagaattagcgagccagcccctggatcatcac
ttggtgcagcttggccggatacacaagccagatttggactatatcattaagtttgtcaag
ccctttgttcattcaatcagacgtgctatcaacaaataccctaccacagacctgcaagcc
aagtgtgctaacaccaccttccccagcacagagaaggctggcacagaagacagtttactc
ctcatcccagaggtatacaaaatcgaggcaggagacagtgagctgtttggagactcccat
ccccaggagcagcatttctttgtactaggggacaatcatagtaacgattcggggatcact
gctgatttgatccagaagttgtacgcgctcttctcctctggagaactgatggtgaatgac
aaggaagagccacatttggaagaagctgcagctccagcgaatgacaaacaagatggcgag
gatgcaagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system