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KEGG   Peromyscus leucopus (white-footed mouse): 114690476
Entry
114690476         CDS       T07241                                 
Symbol
Scn4a
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
pleu  Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:pleu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pleu04040]
    114690476 (Scn4a)
Ion channels [BR:pleu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   114690476 (Scn4a)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH IQ ATP-synt_B Lustrin_cystein
Other DBs
NCBI-GeneID: 114690476
NCBI-ProteinID: XP_028721146
Position
8b:86069434..86097578
AA seq 1720 aa
MFIMITILTNCVFMTMSNPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWN
WLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPMNNTNTTWYGDDVWYGNDSWYGNDTWSS
QESWASNYTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGHCPEGYECIKAGRNPNYGY
TSYDTFSWAFLALFRLITQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVV
AMAYAEQNEATLAEDQEKEEEFQQMLEKYKKHQEELEKAKAAQALEGGEADGDPAHSKDC
NGSLDTSGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKCAHKVLIWNCCAPWVKF
KHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFTAEMVL
KLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASDCSLPRWHMHDF
FHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSA
DSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLRGKILSPKDIMLSLGEPGDAGET
GESAPEDEKKELPPEDGNKDLKDNHILNHVGLTDGPRSSIELDHLNFINNPYLTIQVPIA
SEESDLEMPTEEETDTFSEPEDIKKPLPPVYDGNSSVCSTADYKPPEEDPEEQAEENPEG
ELPEECFTEACVQRCPCLSVDISQGRGKMWWTLRRACFKIVEHNWFETFIVFMILLSSGA
LAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYFTNAWCWLDFLIVDV
SIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVC
LIFWLIFSIMGVNLFAGKFYYCVNTTTSERFDISVVNNKSECESLMHTGQVRWMNVKVNY
DNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPHYEVNIYMYLYFVIFIIFGSFFTL
NLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVY
DFVTKQVFDISIMILICLNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMFAL
RHYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKG
IRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFGNSII
CLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSFKGDCGNPSIGICFFCSYIIISFL
IVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQFIDYSRLSDFVDTL
QEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKQTMEEKFMA
ANPSKVSYEPITTTLKRKQEEVCAIKIQRXYRRHLLQRSMKQASYMYRHSQDGNGDGAPE
KXGLIANTMNKMYGPENENSGVQSQGEEEKGSTGDAGPTMELTPTSPLDTAQTTLPPPPS
ASLPPSASPPPSASPPPSTPPPPSPPQGQTVRPGVKESLV
NT seq 5163 nt   +upstreamnt  +downstreamnt
atgtttatcatgatcaccatcttgaccaactgtgtgttcatgaccatgagcaacccgcct
tcttggtccaaggacgtggagtacaccttcacagggatctacacctttgagtctctcatt
aagatgttggcccgaggcttctgcattgatgacttcacattcctccgggacccctggaac
tggctggatttcagtgtcatcaccatggcgtatgtgaccgagtttgtggatctgggcaat
atctcagccctgaggaccttccgtgtgctgcgggccctgaaaaccatcacggttatccca
gggctgaagaccattgtaggagccctgatccagtccgtgaaaaagctgtcagacgtgatg
atcctcaccgtcttctgcctgagcgtcttcgccctggtggggctgcagctcttcatgggg
aacctgcggcagaagtgcgtgcgctggcccccgcccatgaacaacaccaacaccacgtgg
tatggtgacgacgtgtggtacggcaatgactcgtggtacggcaacgacacttggagcagc
caggagagctgggccagcaactacaccttcgactgggatgcctacatcaacgacgaaggg
aacttctacttcttggagggctccaatgacgccctgctctgcgggaacagcagtgacgcc
gggcactgtcccgaaggttacgaatgcataaaggctgggcggaaccccaactacggctac
accagctacgacaccttcagctgggccttcctggcactcttccgtctcataacccaggac
tactgggagaacctcttccagctgacccttcgagcagcgggcaagacctacatgattttc
tttgtggtcatcatctttctgggctccttctacctcatcaatctgatcctggcggtggtg
gccatggcctatgccgagcagaacgaagctaccctggctgaggaccaggagaaagaggag
gagtttcagcagatgcttgagaaatacaaaaaacaccaggaggagttagaaaaggctaag
gccgcccaggctctggagggcggggaggcagacggggacccggcccacagcaaggactgc
aacggcagcctggacacgtctggggagaaggggcccccgaggccaagctgcagcgcggac
agcgccatctcagacgccatggaggagctggaagaggcccaccagaaatgcccgccgtgg
tggtacaagtgtgcacacaaagtgctcatctggaactgctgtgccccgtgggtgaagttc
aagcacatcatccacctcatcgtcatggaccccttcgtggacctgggtatcaccatctgc
atcgtgctcaacaccctcttcatggccatggagcattaccccatgaccgagcactttgat
aatgtgctctccgtgggcaacttggtcttcacgggcattttcactgcagaaatggtgctg
aagctgatcgccatggacccctatgagtatttccagcagggctggaacatctttgacagc
ttcatcgtaaccctcagcctggtagagctgggcctggccaacgtgcaagggctatccgtg
ctccgctccttccgtctgctgcgtgtcttcaagctggccaagtcctggcccacacttaac
atgctcatcaagatcattggcaactcagtgggtgcgctgggcaacctgaccctggtgctg
gccatcatcgtcttcatcttcgcggtggtgggcatgcagctgtttggcaagagctataag
gaatgtgtgtgcaagattgcctcggactgcagcctgccccgctggcacatgcatgacttc
ttccactccttcctcatcgtcttccgcatcctctgtggggagtggatagagaccatgtgg
gactgcatggaggtggccggccaggccatgtgcctcaccgtcttcctcatggtcatggtc
atcggcaacctggtggtcctgaatctgttcctggctctcctgctgagttccttcagtgcc
gacagcttggcggcatcagacgaagacggcgagatgaacaacctgcagatcgccatcggg
cgcatcaagtggggcatcggctttgccaaagccttcctcctggggctgttgcgcggcaag
atcctgagccccaaggacatcatgcttagcctgggtgagcccggggatgctggggagacc
ggggaaagtgctcccgaggacgagaagaaggaactgccacccgaagatggaaacaaggac
ctgaaggacaatcacatcctgaaccacgtgggcctgactgatggcccccgctccagcatc
gagctggatcacctcaacttcatcaacaacccctacctcaccattcaggtgcccattgcc
tccgaggagtccgacctggagatgcccacagaagaggagactgacacgttctcggagcct
gaagacatcaagaagccgctaccgcctgtctatgacgggaactcctccgtctgcagcaca
gctgactacaagccccctgaagaggaccctgaggagcaggctgaggagaaccctgagggc
gagctgcctgaggaatgcttcacggaggcctgtgtgcagcgctgcccctgcctctctgtg
gacatctcccagggccgtgggaaaatgtggtggacgctgcgccgggcctgtttcaagatt
gtggaacacaattggtttgagacctttattgtcttcatgatcttgctcagcagcggagcc
ctggccttcgaggacatctacatcgagcagcggcgggtcatccgcaccatcctggaatat
gccgacaaggtcttcacctacatcttcatcctggagatgctgcttaagtgggtggcctac
ggcttcaaggtgtatttcaccaacgcctggtgctggcttgatttcctcattgtggacgtc
tccatcattagcctagtggccaactggctgggctactctgagctggggcccatcaaatcc
ctgcgcacactacgggccctgcgtcccctgagggcactgtcgcgatttgagggcatgagg
gtggtggtgaacgccctcctgggagccatcccctccatcatgaatgtgctccttgtgtgc
ctcatcttctggctcatcttcagcatcatgggggtcaacttgtttgctgggaagttctac
tactgtgtcaacacaaccacctctgagagattcgacatctctgtggtcaacaacaagtct
gagtgtgaaagcctcatgcacacgggccaggtccgctggatgaacgtcaaggtcaactat
gacaacgtgggtctgggctatctctccctccttcaggtggccactttcaagggttggatg
gacatcatgtatgcagccgtggactcccgggagaaggaggagcagccgcactatgaggtg
aacatctacatgtacctttacttcgtcatcttcatcatctttggctcctttttcacgctc
aatctcttcatcggcgtcatcattgacaacttcaaccaacagaagaagaagtttggaggg
aaagacatcttcatgacagaggagcagaagaaatactacaatgccatgaagaagcttggc
tccaagaagccccagaagcccattccccgacctcagaacaagatccagggcatggtgtac
gacttcgtgacaaagcaggtgtttgacatctccatcatgatcctcatctgccttaacatg
gttaccatgatggtggagacggatgaccagagccagctcaaggtggacatcctatacaac
atcaacatggtcttcatcatcatcttcacaggggagtgtgtgctcaagatgtttgctctg
cgccattactacttcaccattggctggaatatcttcgactttgtggtggtcatcttgtcc
atcgtgggccttgcgctttctgacttgatacagaaatactttgtgtcacccacactgttc
cgtgtgatccgattggcgcggattgggcgagtcttgcgtctgatccgtggggccaagggc
atccggacgctgctgtttgctctcatgatgtcactgcctgctctcttcaacatcggcctc
ctcctcttcctggtcatgttcatctactccatctttggcatgtctaactttgcctatgtc
aagaaagagtcgggcatcgacgacatgttcaacttcgagacgtttggcaacagtatcatc
tgcctctttgagatcaccacgtcagccggctgggatgggcttctgaaccccatcctcaat
agtgggcccccagattgcgacccgacactggagaacccaggcaccagcttcaagggtgac
tgtggcaacccatccattggcatctgtttcttctgtagctacatcatcatctccttcctc
atcgtggtcaacatgtacattgccatcatcctagagaatttcaatgtggccactgaggag
agcagcgagcccctcagtgaggatgactttgagatgttctatgagacctgggagaagttc
gaccctgatgccactcagttcatcgactacagccgcctctctgactttgtggacaccctg
caggagccgctgaaaatcgccaaacccaacaagatcaagcttattacattagacctgccc
atggtgccgggggacaagatccactgcctggacatcctctttgccctgaccaaagaggta
ctgggtgactctggggagatggatgccctcaagcagaccatggaggagaagtttatggcg
gccaacccctccaaggtctcctatgagcccatcaccaccaccctcaagaggaagcaggag
gaggtgtgtgctatcaaaatccagaggngctatcgccgccacctgctgcagcgttctatg
aagcaggcctcctacatgtaccgccacagccaggatggcaacggagacggagcccccgag
aagngaggcttgattgccaacaccatgaacaagatgtacggccctgagaatgagaacagt
ggtgtgcagagccagggggaggaggagaaagggtctacaggggatgctggacccaccatg
gagctcacacccaccagccccttggacactgcccagactactcttcctcctcctccatca
gcgtcattaccaccatcagcatcaccaccaccatcagcatcaccaccaccatcaacgcca
ccaccaccatcaccaccacaggggcagactgtgcggccaggggtcaaagagtctcttgta
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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