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KEGG   Pangasianodon hypophthalmus (striped catfish): 113541991
Entry
113541991         CDS       T05759                                 
Name
(RefSeq) collagen alpha-4(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
phyp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113541991
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113541991
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113541991
   00536 Glycosaminoglycan binding proteins [BR:phyp00536]
    113541991
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   113541991
Glycosaminoglycan binding proteins [BR:phyp00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113541991
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   113541991
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 Kunitz_BPTI vWA_SIBA-E Amdase
Other DBs
NCBI-GeneID: 113541991
NCBI-ProteinID: XP_026795015
Position
Unknown
AA seq 2826 aa
MGSAHGLLCIFVISSYLVMGHGQKIVCTQEAKADIVFLVDGSASIGLKNFQQIREFLTSV
VKNFDISPNKVRVGMVQFSDTPKTEFFLNTYEEKQEILDYIKRLPYKTGGTNTGMALQFL
LTNHFTEQAGSRANQMVPQIAFVITDGSSQDDVEPYAQELRQKGIKVYAIGIKDADEKFL
KKLASQPYENHVYSVSDFTALQEISLSVSRELCTTVEEAQGERQECSEITAADIAFLVDS
SDTISDTKFGEIRRFLHAFVERLDVGKQKVRVGLAQFSDRPYQEFLFGTDEVTKEDLLRK
LLSITYRKGGPKRMGLALDFIRNNYFSQARQQVSKIAIVITDGESSDNVEAPAQELRKQG
VVVFVIETGPANNAQLQAIANSPQKEFLYSMDNYQNSLDLIEDLRRRVCIAVDDQLRASS
LKFADVFFLVDSTASRPESQQIRTFLSRLVNQLAVDKDGNHVGLAQFSESVEEEFLLNNN
KTRNEISSAIRNLRLKPKGVRQIGKAIEHARKNFFNTSTGSRIAQGFKQVLLVTSVGKSN
DTVIQPSRTIKKDGIHVISVGLGKAEMDELDDISSPTQTYKMTPQTNLQVVQKVKSAIET
QDVPSISQDCKSASIADIVFIVDESGNMGPENFQLVRNFLINTISGLDVGIDKVRIAIVH
YSDVPRADVYLNTFRTKNEILQYIQKLSYGRGKAYTGAALRFAKDNVFTKERGSRSDEHV
QQIAVVITDGWSADEISNEAAELRRSGVTVFALGIKNVNVNELKEIASYPPRKFVFNVES
FIKLNALSSMLTQSICGGITSDFIPILKEITLQKGCRFTAEADIYFLLDESGSISYEDFD
EMKAFILEFLHMFEIGPDKVRIGVVKFASHATTVFRLDTYNTKSEVEKAVKGLIMYGGGT
RIDLGLEAMIPLFRQASETRKDKVREILIMITDGKSESVGTPVNIPAEELRGQNITIYAI
GVKDADMAELEDVSGSPKRTFYVQNYDALKLIKTKVLKEICSFEACADLSADVVFLIDGG
DAVDELDFKKTKELIGFAVEKLPVKENRVRLAVVQYSTDTIVEFSLNAFHDKDSLQKEIA
SIQQLKGKTYTGKALSEVLPVFQEARGERASTLQFLILVTDSVSKDDVVQPSRELRERNI
NIYAIGLGHASKSQLLNISGSYERVYLDSNFASLQTLGSEVIFKICNTECKRPELMDVIF
LVDGSGGAEDTNFQVMKSLLGAVVKKADVGQKRVRFGAIVYSDQPKSEFTLNQYNSKDKV
LEAISEMHAPGGRRNTAQALKSALSYFAAAHGGRRFQHVPQVLCLITDGPVADSAGLTKW
PEDLAGSEVNVFAFGMAGANEAELTRITGNNERAFYVDNYEAFKMLYKPISQQLCNLTKP
VCEKESADLVILIDGSESISVKNWEVVKGSAINIVKKLEIAPDRWRVGVAQFSDKVLNHF
YLDKYSNIAGVEQGIHDISQRKQGTNTWQALKEIGDYFTPEHGSRIKEGVSQNLLLITDG
KANDKEDPSTLANLRAKNIEVFAIGIGDDINHHELIKIAGSKERVFYETFESLPMKTTAS
KVLEALCKPDSVPDPQGCSIDIGIGFDASSRTSSQPLLGPHTESLVAAAIHRLSMIGELC
CVAADKIETKFGFRLVSGKDGKVMDDFDFEKYDQNVVTKVLNIRPTTPTAFNALLLNSFR
QKFTSSRAGVKMVILFTDGFDDSMESLKASAESLRQSGVNALVIVALKDNVDHQALEFGR
GFSFNKPLSINMLNVGNALLEQLETVASRECCNVTCTCSGNSGLLGPFGPPGLKGGPGPK
GHPGMPGEEGSPGERGEPGLNGTQGHQGCPGRRGLKGSIGYTGNRGEDGEFGLIGVDGQQ
GESGAAGKAGLKGDPGRPGVKGVKGGSGPKGERGVRGDPGIPGADSNMQGPKGEPGYAGL
PGVQGPDGAPGQAGERGENGFPGKKGPPGTPGPSSTEQGERGPVGPAGQPGLQGPPGRGG
AKGEKGDQGLPGVQGLYGAAGDKGAKGNPGRRGPRGRLGDMGSKGDTGPEGFRGPPGHMG
ADSYGPPGRKGHKGNPGFPGYPGLPGEDGTKGSTGERGLKGHRGRPGNSGNRGPPGDPGD
KGLIGPQGPKGSPGSSAKTECELVNYVRENCVCCGGHTQCPGYPTELVIALDMSSDVTSE
AFDKMRSTAVSLLEDISIAETNCPVGARVSVVSYNSQTSYLIRFSDYRRKSQLLEAVKGI
SLQRSRNRRNMGQAIRFIVDNVFKRVRNGKLVSKAIIFLTNGDSQDISAINTGMMKLKAS
DINLGVITFNDAPNVRLAIQADETRSFKVTDEGEARWIKECVICFDHCNPDKRCGIDSNP
EPEEVDVDLTVLMDSSYDLQADQYSGVKEFLVSLMNIVDVSNEPTKEDGKARLGVYQQSS
TYPNSHVQEVLGLDAFKDRAVTERHIAQDMQQAGGSPRLDSALEWMITNVLLEARAPRKK
RMVLNILGEESGRFMDKDELKYISMLSQCNDIVMVTLTVGEKFSWTQVEGLSTSPVEQHH
IPLGQVGPKERKYAQKYLRAFLRLLTRDIFPKPSSLNDECSSFVQRQINRLPSVPPINSH
DVFPTEETITQSFTESYAEASTDGYQETMAPLPEVFMARPEIYTEIIKEKYPTYTDTYPE
GFTDQYEDAYHNEYQDQPMKEHTAVDSKVTPVNSETAEKQDEKDAAHQNGPDASKARCLL
DKDTGRVCSSYESSWYYDRNTRKCTHFWYGGCDGNDNRFLTETECEETCRGLDGQVFLQD
EPSIATDVCQLEQDMGTCFNFTLKWYYNASKTECSRFWYGGCTGNGNRFDTREECEAQCL
RVKKKL
NT seq 8481 nt   +upstreamnt  +downstreamnt
atggggtcggctcatggattactgtgtatttttgtaatctcatcatacctcgtcatgggt
catggccaaaaaattgtgtgcacgcaggaagccaaggctgatatcgtgtttttagtggat
ggctctgccagcattggtctaaagaacttccaacagatacgtgaatttctcacgtccgtt
gtgaagaactttgacatcagccctaataaggtcagggtcggcatggtccagtttagcgac
acgccaaaaactgagtttttcctcaacacctatgaggaaaagcaggagattcttgactac
attaagcgtttgccgtataagaccggtggcaccaacacgggcatggccttgcagttcttg
ctgacaaaccactttactgagcaagccgggagtcgggcaaaccaaatggtgccgcagatc
gcttttgtcatcacagacggaagctctcaagatgacgttgagccatacgctcaggagctg
aggcagaagggaatcaaagtgtatgccatcggaatcaaagacgcagacgagaagttcctg
aagaagctcgctagtcagccatatgaaaatcatgtatacagcgtgtctgactttactgct
ctccaggaaatctcgctgagtgtcagtcgcgagctgtgcaccaccgtagaagaggcacaa
ggagagcggcaagaatgcagcgagattaccgcagcagacattgcttttcttgtggattcg
tctgacaccattagcgacaccaaatttggagaaatccgtcgttttctccatgcttttgta
gagagacttgacgttggcaaacaaaaggtgagagttggccttgctcagtttagcgacaga
ccgtaccaggagtttttgtttggtacagatgaagtcacgaaagaagatctgctcaggaag
ctgctcagcatcacatatcgcaagggtgggccaaaaagaatggggctcgctctggacttc
attcggaacaactacttcagccaagctagacaacaagtttctaagattgccatcgtgatc
acagacggggagtcgagtgacaatgtcgaggcgccggctcaggagctccgaaagcaagga
gtcgttgtctttgtgatcgagactggaccagcaaataacgcgcaactccaagccattgct
aacagtccccagaaagaattcttgtacagcatggacaattaccaaaattcactagacctg
attgaggacctacgcagaagagtgtgtattgctgtcgatgaccaattacgagcttcttcc
cttaagttcgcagatgtctttttcctggtggatagtacagcatcaagaccagagtcccaa
caaatcagaaccttcttgtcacgactcgtcaaccagctcgctgtagacaaggacggtaac
catgttggcctggcacagttcagcgaaagcgttgaagaggaatttctgctcaataataat
aagaccagaaatgaaatctcatcagccatacgcaatctccgacttaagcctaaaggcgtg
cgtcaaattggaaaagcaatcgaacatgcacgcaaaaacttcttcaatacttcaaccggt
agtcgcatcgcccaaggcttcaaacaggtcctgctggtgaccagtgtgggaaaatcgaac
gacactgtcattcagccatcgcgcacaattaaaaaggacggaatacacgtaatctctgtt
ggcttgggcaaagctgaaatggacgagctggacgatatttctagtcccactcaaacctac
aaaatgacaccacaaaccaatctgcaggtggtacagaaagtcaagtctgcgattgaaaca
caagacgtgcccagtatatcccaagactgcaaatccgccagcatagcagacatcgtgttt
atcgttgatgaatctggcaacatgggacctgaaaacttccagcttgtacgcaacttcctg
ataaacaccatttcagggctcgatgtaggcatcgacaaagtgaggatagccattgttcac
tacagcgatgttcccagggccgatgtttatctgaacacattcaggaccaagaatgaaatt
ttgcagtacattcagaagctgtcctacggcagaggcaaagcgtacactggagctgctcta
cgatttgccaaggacaatgtattcaccaaggaaagaggcagccgaagtgatgaacatgtc
caacagatcgcagtggtcatcacagacggatggtctgcagacgaaatcagcaatgaggca
gcagagctgcgtcgctcaggcgttacagtttttgctctgggcatcaaaaacgttaatgta
aacgaactgaaggagattgcttcctacccgcccagaaagtttgtgtttaacgtagagagt
ttcattaagctcaatgcattgtcgagtatgttaacacaaagcatttgcgggggtattacc
tctgacttcatacctatattgaaagaaattacacttcagaaaggctgcaggttcacagct
gaagcagacatctatttcctactcgatgaatcagggagcatttcttacgaagactttgat
gaaatgaaagcttttattttagagttccttcacatgtttgagatcggacctgataaggtg
cgcattggcgtggtaaaatttgcaagccatgcaaccactgtcttccgcctggacacttac
aacacaaagtctgaggtggaaaaagcagtgaaaggcctaataatgtacggaggtggcact
agaattgatttgggtctagaggcaatgatcccgctctttaggcaggcatcagaaacgcgc
aaggataaggttcgcgaaatactcatcatgattacggatggcaaatctgagtcagttgga
acgccagtgaacattccagctgaagaactgagggggcagaacatcacaatctatgctatt
ggagtgaaagacgcagacatggccgaactggaagatgtctccggaagccctaaaaggaca
ttttatgtccaaaactatgatgcccttaagctaattaaaaccaaagtccttaaagaaatt
tgttcatttgaagcttgtgccgatctttcggcggacgtcgtctttctgatcgacggtggg
gatgctgttgacgagctagactttaaaaagacaaaggaactaataggatttgccgtagaa
aaacttcctgttaaagagaacagagtgcgacttgctgtcgttcagtacagcacagacaca
attgtggaattttccttaaatgcgttccacgataaagactcgttacaaaaggaaattgca
tccatccagcagcttaaaggcaaaacctacacaggcaaggcactcagtgaggttttaccg
gtgtttcaggaggccagaggggaacgtgctagtactttgcagttcctaatacttgttacc
gatagtgtgtccaaagatgacgtagtacagccttctagagagcttagggagcggaacatc
aacatttatgctatcggtttgggacatgctagtaaatctcagttgcttaatatttccgga
tcttatgaaagagtctacctggacagcaactttgcttccctacagaccttgggtagtgag
gttatcttcaagatttgcaatactgaatgcaaaagacctgaattgatggatgtaatcttt
ctggtggatggctctggtggtgctgaggacacaaattttcaagtgatgaaaagtttattg
ggagcagtggtgaaaaaggcagacgtcgggcagaaaagagtccgcttcggagcaatcgtt
tattctgaccagcctaaatccgagttcactctgaatcagtacaacagcaaggacaaggtt
ctggaagccatctcagagatgcacgctcctggaggtagaagaaacacggcccaggctctc
aagtctgcactctcctactttgcggcggcacatggaggaaggcgttttcagcatgttcct
caggtgctatgcttaataacagacggtccagtcgctgactctgctggcctcacaaaatgg
cctgaagatcttgcaggttctgaggtcaacgtgttcgcatttgggatggcaggagccaat
gaggctgagctcacaagaattactggaaataacgaaagagccttctacgtggataactac
gaggcttttaaaatgctgtataaaccaattagtcaacaactctgcaatctgacaaagcca
gtgtgtgagaaggagtcggcagatctggtcattttgatcgacgggtccgaatcgatttct
gtgaagaactgggaagttgtaaagggctccgcgatcaacattgttaaaaagctcgaaatt
gcaccagacagatggcgggttggcgtggctcagtttagtgacaaagtactgaatcacttc
tacctagacaaatacagcaatatagcaggagtggaacaaggcatacatgacatttcccaa
agaaaacaaggtacaaacacgtggcaagcactgaaagaaataggagactactttacgcca
gagcatggaagcaggataaaggaaggagtgtcacagaacttgctgctaatcacagatggc
aaagctaatgacaaagaggatccaagtacactagctaatcttcgagcaaagaacattgag
gtatttgctattgggattggggatgatataaatcaccatgagctcatcaaaattgctggt
tcaaaagagcgggttttctacgagacctttgagagtcttccaatgaagacaaccgcaagc
aaagttctagaagccctttgcaaaccagacagcgtaccggatccgcagggatgctctatt
gacattggcattggatttgatgcatcaagcaggacaagctcgcagcccctactaggacca
cacacagagtcccttgttgctgcagctattcatcgtttatccatgattggtgaactctgc
tgcgtcgctgcagacaaaattgaaaccaagtttggcttccgccttgtctctggcaaagat
ggcaaagttatggatgattttgactttgaaaagtatgaccagaacgtggtcactaaggtg
ctcaacatacggcctacaacacctactgctttcaacgcacttcttctaaactccttcaga
caaaaattcactagctcgcgggctggagtgaagatggttatactattcacagatggattt
gatgattccatggagtctctaaaagcgagtgcagagagcctccggcaaagtggggttaat
gcgctggtgattgtggctctgaaagacaatgtggaccaccaagcgctggaatttggacga
ggtttcagctttaacaagcccctttccatcaacatgcttaacgtgggcaatgcactgctg
gaacagcttgagacagtggcatcaagagagtgctgcaatgtgacatgtacatgtagtggc
aattctggcctcttgggaccctttgggcccccgggactaaagggaggaccagggccaaag
ggccatcctggaatgcctggtgaggagggaagcccgggtgaaaggggcgagccgggtctg
aacggaactcagggacaccaaggctgccctggaagaagaggcctcaagggatcgataggg
tacactgggaatcgaggagaagatggagagttcggtctcatcggggtggacggtcaacag
ggtgagtctggtgcagctggaaaggcaggactgaagggagatccaggacgcccaggtgta
aagggagttaaaggaggttctggcccgaagggagaacgtggagtgagaggagatcctgga
ataccaggagcagacagcaacatgcagggtccaaagggtgagccgggatacgcaggcctt
cctggtgttcaaggcccagatggagctccgggtcaagcaggagagcgaggagagaatggc
tttcctgggaagaagggaccaccaggaacgccggggccttcctccactgaacaaggagaa
cggggaccagtgggtcccgccggtcagccgggattgcagggtcctcctgggagaggtgga
gccaaaggagagaaaggtgatcaaggtctacctggagttcagggactgtatggtgcagct
ggggataaaggggccaaaggaaatccaggacgcagagggccacggggtcggctaggcgac
atgggcagtaaaggtgacactggaccagagggtttcagaggaccaccgggccacatgggc
gcagacagttacggacctccaggacgtaaaggacataaaggaaatcctggttttcctgga
tatcctggtttgccgggtgaagatggaactaaaggatccaccggagaaagaggactcaaa
ggacaccgaggacgaccggggaacagtggaaatcggggacctcctggagatcctggggac
aaagggttgatcggaccccagggtcctaaaggatcaccaggaagcagtgcgaaaactgaa
tgtgaattagtgaattacgtgcgtgaaaactgcgtttgctgtggaggtcacactcagtgt
ccaggttaccctacagagctagtgattgctctggacatgtcctcggacgtaacgtcagag
gcgtttgataagatgcgttctacagccgtgtctctgctagaggacatctccattgctgag
acgaactgtccagtaggagctcgagtttccgttgtgtcctacaacagtcaaaccagttat
ctgatccgtttctcggactaccgtcgaaagagtcagctactggaggcagtcaagggaatc
tctctgcagaggagcaggaaccgccgcaatatgggccaggccatacgcttcattgttgac
aacgtcttcaaacgcgtccgaaatggcaaactagtcagcaaggcgatcatcttcctgaca
aacggggactcgcaggacatctcagccatcaacacaggcatgatgaagctcaaggcttca
gatatcaatctgggagtcatcaccttcaacgatgctccaaatgttcgtcttgccattcag
gctgatgaaacaaggagtttcaaggttactgatgaaggggaagccagatggattaaagag
tgtgtcatctgttttgatcactgtaacccagacaagaggtgtggcatagactcaaaccct
gagcccgaggaggtggatgtggacctaaccgtactgatggactcctcttatgaccttcag
gctgatcaatactctggtgtgaaagagttcttagtttctctgatgaacatagtagacgtg
agcaatgaacctaccaaagaggacgggaaggccaggctcggtgtctaccagcagagctcc
acttaccccaactcccacgttcaggaagtgctcggacttgacgcattcaaagaccgtgcc
gtgacagagagacacattgctcaagacatgcaacaagctggtggttcaccacgtctcgat
tcggctctggaatggatgataaccaatgttctcctggaagcacgggcaccaaggaagaag
cgaatggtcctgaacatcctcggtgaagaatctgggaggttcatggacaaagacgagctg
aaatacatctccatgctctctcagtgtaacgatattgtgatggtcacgctgacggtggga
gaaaaattcagctggactcaggtagaaggtctcagcacatcaccagtggagcaacaccat
ataccgctgggacaggtggggccgaaggaacggaagtatgctcagaaatatttacgagcc
ttcctacgcttgcttaccagagatatcttccccaaaccctcttctctaaatgacgagtgc
agcagttttgttcaaaggcagattaaccgtttgccttctgttcctccaataaacagccat
gacgttttcccgactgaggagaccattacgcaatcttttaccgagtcctacgctgaagca
agcacagacggatatcaggaaaccatggcaccgcttccggaagtgttcatggcacgtccg
gaaatatacactgagataattaaggaaaaatatccaacatacacggacacgtatccggag
gggttcacagatcaatacgaggacgcttaccacaatgagtatcaggaccaacctatgaag
gagcacactgcagtagacagtaaagtgacgccagtgaacagtgagacggccgagaagcaa
gacgaaaaggacgctgcgcaccaaaacgggcctgatgcatcgaaggcccgatgcttgctg
gacaaggacactgggagggtgtgttcgagctacgagtccagctggtactacgaccgaaac
actcggaaatgcacacacttctggtacggcggctgtgacgggaacgacaatcgcttcctg
acggaaactgagtgtgaggagacgtgcaggggattagatggtcaagtttttctccaggat
gaaccatcgatagcaacagatgtttgccagctcgagcaggacatgggcacgtgcttcaac
ttcacgttgaaatggtactacaacgcgtctaagacagagtgcagccgcttctggtacgga
ggctgcacgggcaacgggaacaggttcgacacgcgggaggagtgtgaagctcagtgtctg
agagtcaagaagaagctctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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