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KEGG   Pangasianodon hypophthalmus (striped catfish): 113539515
Entry
113539515         CDS       T05759                                 
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010  MAPK signaling pathway
phyp04020  Calcium signaling pathway
phyp04218  Cellular senescence
phyp04260  Cardiac muscle contraction
phyp04261  Adrenergic signaling in cardiomyocytes
phyp04270  Vascular smooth muscle contraction
phyp04530  Tight junction
phyp04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:phyp04040]
    113539515
Ion channels [BR:phyp04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   113539515
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 113539515
NCBI-ProteinID: XP_026791091
Position
Unknown
AA seq 2090 aa
MSVNGPVPSPVPPPADTEDLPTTSVAPVGSLAQKKRLQYAKSKSTSANTRPQRALFCLNL
NNPFRQACISIVEWKPFDIFILLAIFANCMALAIYVPFPEDDSNSTNHDLESVEYAFLII
FTVETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVILEVVTKEGGQQGSGSPAP
SHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVII
IYAIIGLELFLGKMHATCYIVGSALIAVDDPAPCAINGNGRICTLNNTECREGWQGPNGG
ITNFDNFLFAMLTVFQCITMEGWTDVLYWTNDAMGMELPWVYFVSLVIFGSFFVLNLVLG
VLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDWITQAEDIDPDNEDEEDGSKHNR
VTIADIMNKKKKGLAWFSHSTDTHASAPASDTESVTMEKDDEKCCGALCQKISKSKFSRR
WRRWNRFCRRKCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPEWLTEVQRVANRVLLA
MFTLEMLVKMYSLGLQAYFVSLFNRFDCFVVCSGIIETILVEHEIMSPLGISVLRCVRLM
RIFKVTRRWASLSNLVASLLNSMKSIASLLLLLFLFIIIFALLGMQVFGGKFNFDTIHKK
RSSFDNFPQALLTVFQILTGEDWNQVMYEGIKAYGGPSSSGMIVCIYFIILFVCGNYILL
NVFLAIAVDNLAGSRSLGASTKPVDVKQDDEDEEFKVPVEDERENAEEEDEGEAPSGPRP
TIAELVRKEKIVPIPEGTAFFIFSRTNPLRVLCHKIINHHLFTNLILVFIMLSSVSLAAE
DPIRNHSFRNNVLGYADYVFTSLFTFEIVLKMMTFGAFLHKGAFCRNYFNLLDLLVVGVS
LVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKNVVQCVFVAIRTIGNIMIVTTLLQ
FMFACIGVQLFKGKFFRCNDEAKSTSEECKGTYIFFKDGDMNNPTIQKRHWHNSDFNFDN
VLMAMMALFTVSTFEGWPALLYKAIDSNKENFGPIYNYRVEISIFFIIYIIIIAFFMMNI
FVGFVIVTFQEQGEKEYRNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTA
FEYIMFVLIMLNTICLAVQHYGQSKAFNYVMDILNMVFTAVFTVEMVLKLIAFKPKHYFT
DAWNTFDALIVVGSVVDIAITEANPAEGEELPPTEAPQVDESGNAEESSRISITFFRLFR
VMRLVKLLNRGEGIRTLLWTFIKSFQALPYVALLIAMMFFIYAVIGMQIFGKIAMVEGTQ
INRNNNFQTFLQAVLLLFRCATGEAWQEIMLACLSGKLCDPESDYNPGEEMTCGSGFAIV
YFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKH
LDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKT
DGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKR
KEEGLVGVHPTQNNTAITLQAGLRTLHDIGPEIRRAISCDLQDEELVDFIPEEDEEIYRR
NGGLFGNHINHINGDPHQGSGHQTNATQRPLQVHPPPHYADMEQPVGRLDRANAMAQHNH
HHHHHHHHNHHNSYSKSPKSTNINLNNANMSSLPNGGHNRYYQHVPANGYTGSYYPGEYE
KPRTPHGQRRRYYETYIRSRGSIRRQPTIRREEEIEEDRYSGEYYSGEEFYEEDGMLSGD
RYPSSDQEYETPRGYHHPDSYYDDDEQPLYHDSYRSPKRRRLPPTPQGNRRPSFNFECLR
RQSSQDELPRQRTALPLHLMQHQVMAVAGLDWSRAHGLSPTRSTRSWATPPATPASKDRT
PYYTPMIRVDRPHRDSMGGSYCSVRKSSWYTDEPEYQQSTYSPVHLQIPHEYRNQYHQKR
GSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACDMTIDEMESAATHLLNGGVMPRV
NGVHVYPVMSQIEYDVQDVSANYSDEEPEPESRPRYEEDLADEMICITTL
NT seq 6273 nt   +upstreamnt  +downstreamnt
atgagcgtcaacggcccggtcccgtcacctgtcccgccccccgccgacacagaggatctg
cccacgacgtcggtggcaccggtgggctcgctggcacagaagaagaggctgcagtatgcc
aagagcaagagcacctcggccaacacacggccacagagggcgctgttctgcctgaacctg
aacaacccgtttcgccaggcctgcatcagcatcgtggagtggaagccatttgatatcttt
atactacttgctatttttgccaactgcatggccttagccatctacgtcccgtttcctgaa
gacgactccaactcgaccaatcacgacctggaatcagttgaatatgccttcctcatcatt
tttacagttgagaccttcctaaagatcatagcgtacgggttagtcatgcaccagaacgcg
tacgtcaggaacggctggaacatgctggattttgtcatcgtcgtcattggactgttcagt
gttatcctagaagttgtgaccaaagaagggggtcagcagggatcaggaagccccgccccc
tcacacggccatggaggcaaaccgggaggcttcgacgtcaaagcgctgcgagccttcagg
gtgctgcgaccccttcgcctggtctcaggagtacctagtttacaggtagtgttgaactcc
atcattaaagccatggttcctcttctccacatcgctctgctggtcctcttcgtcatcatc
atctacgccatcattggccttgagctcttcctcggcaaaatgcacgcaacctgctatata
gttgggtcagctttgatagcggtggacgacccagctccctgtgcaataaacggtaatggc
cgtatctgcaccctgaacaatacagagtgcagggaaggctggcagggtcccaacggcggc
atcaccaacttcgacaacttcctgtttgccatgctaacggtgttccagtgtatcactatg
gagggctggacagacgtgctgtactggacgaatgatgcgatggggatggagctgccctgg
gtctactttgtgagcttggtcatcttcggctctttcttcgtcctgaaccttgttctggga
gtgttgagtggtgagttctctaaggagcgagagaaggcgaaggcccgcggagatttccag
aagctccgtgagaagcagcagatggaggaggacctgaagggctacctggactggatcaca
caggccgaggacatcgaccctgacaatgaggatgaggaggatgggagcaaacacaaccgg
gtcacaatcgctgacatcatgaacaagaagaagaaagggttagcctggttcagtcactct
actgacactcacgcgagtgctccggcgagcgataccgaatctgtcaccatggagaaagat
gacgagaaatgctgtggcgctctgtgtcagaaaatttccaagtcaaaattcagtcggcgc
tggcgtcgctggaacaggttctgccgcaggaagtgccgcttggccgtgaaatctgtgccg
ttttattggctcgtgatcattttggtgttcctcaatacgctcaccatttcatcagagcac
tacaaccaaccagagtggctcacagaagtgcagagggtggccaatagggtgctgctggcg
atgttcacgctggagatgctagtgaagatgtacagtctgggactgcaggcctactttgtc
tcactctttaaccgtttcgactgttttgtcgtatgcagcggaatcatagagacgatccta
gtggaacatgaaatcatgtctccactcggcatctccgtgctccgctgtgtacgactcatg
aggatctttaaagttacacgtcgctgggcatctctcagtaatctggtggcatctctgctg
aactcaatgaagtccatcgcctcgctgctgctcctgctcttcctcttcatcatcatcttc
gctctgctcgggatgcaggtgttcgggggcaagttcaacttcgacaccatacacaaaaaa
cggagcagcttcgataacttcccccaggccctgctgaccgtctttcagattctgaccggt
gaagactggaaccaggtgatgtacgaaggcatcaaggcgtatggcggtccttcatcatcg
ggaatgatcgtgtgtatttacttcatcatcctcttcgtgtgtggaaactacatcctgctg
aacgtgttcttggccatcgccgtggacaacctggcaggctcgagatcactcggtgcttca
acgaagccagtcgatgtcaagcaagatgatgaagatgaagagttcaaggttccagttgaa
gatgagagggagaatgcagaagaggaggatgaaggggaggctccatcagggcctcgtccc
accatcgcagagctggtgaggaaagagaagattgtaccgataccagagggcaccgccttc
ttcatattcagcaggacaaacccgcttcgtgttctgtgccacaagataataaaccaccac
ctcttcaccaacctcatcctcgtcttcataatgctcagctccgtctccctcgctgctgag
gatccaatcagaaaccactctttccgcaataacgtcctaggctatgctgattatgtcttc
actagtctgtttacatttgagattgttttgaagatgatgacgttcggagcgtttctccac
aagggggcgttctgcaggaactactttaacctgcttgacctgctggtggtcggtgtgtct
ctggtgtcatttgggatacaatcttcggcgatctctgtggtgaagattctgcgtgtactg
agagtgttgaggcccctcagagccatcaacagagccaaaggacttaagaacgtggtccag
tgtgtgtttgtggccatcaggaccatcgggaacatcatgatcgtcacaacgctgctccag
ttcatgtttgcctgtatcggagtgcagctcttcaaggggaaatttttccgctgcaatgac
gaggccaaatcaacctcggaggagtgcaagggcacatatatctttttcaaagacggagac
atgaataatcccaccatccagaaacgtcactggcacaacagcgacttcaacttcgacaat
gtgctcatggccatgatggcgctcttcaccgtgtccacgtttgagggctggccggcgctt
ctgtacaaggccatcgactcgaacaaggagaactttggtcctatctacaactaccgtgtg
gagatctccattttcttcatcatctacatcatcatcatcgccttcttcatgatgaacatc
ttcgtgggtttcgtcatcgtgacgtttcaggagcagggagagaaagagtatcggaactgt
gaactggacaagaaccagcgccagtgtgtggagtacgcacttaaagcccgacctctgagg
cgctacatccctaaaaacccctatcagtacaagttctggtacgtggtgaactccacagcc
ttcgagtacatcatgtttgtcctcatcatgctcaacacgatctgcctggctgtgcagcac
tacgggcagtctaaggcgtttaactacgtgatggatatcctgaacatggtgttcactgca
gtctttactgtggagatggtcctcaaactgatcgccttcaaacccaagcattatttcact
gatgcttggaacacgtttgatgccttaattgtagttggtagcgtcgtagatattgctatc
actgaagccaaccccgcggagggggaagagttgccgcccacagaggctccacaggtggat
gagtcagggaatgcagaagaaagctctcgcatctccattaccttctttcggctgttcaga
gtgatgcgattggtcaagctgctcaacagaggggagggaattcgtaccctcctgtggacc
ttcatcaagtccttccaggctttgccatacgtcgctctgctgatcgccatgatgttcttc
atctacgccgtcatcggcatgcagatatttgggaagatagccatggtagagggtacacaa
atcaaccggaacaacaacttccagacttttctgcaagctgtgcttctgctgttcagatgt
gcgacaggtgaagcgtggcaggagatcatgctggcgtgtttgtccgggaaactctgtgac
ccagagtcggactataatcctggagaggagatgacctgcggcagcggcttcgcaattgtc
tacttcatcacattctacatgctttgtgcattcctgatcattaacttgttcgtggccgtc
atcatggacaactttgactacctgactcgtgattggtcgatcttgggaccacatcacctc
gacgagtttaagaggatatggtccgaatatgatccagaagccaagggcagaataaaacat
ttagatgtagtgacgctactgcggcgcattcagcctccgcttggcttcggaaagctgtgt
cctcacagagtagcatgcaagcgtctagtggccatgaacatgcccctgaacagtgatggc
accgtgatgtttaacgccacactgtttgcactggtcaggactgcactgaagatcaaaaca
gatggtaatttggagcaggcaaatgaggagctgcgagccgtcattaaaaagatctggaag
aggaccagcatgaagctgcttgaccaagtggtgccccctgctggtgatgatgaggtaacc
gtggggaagttctatgccacctttctgatacaggactactttaggaaattcaagaaacgc
aaagaagaaggactggtaggagtgcatcctacacagaacaacacggccatcacgctgcag
gctggtctccgcacgctgcatgatattgggcccgaaatccgccgtgccatatcatgtgac
ctccaggatgaggagctagtagactttatacctgaggaggacgaggagatttataggcga
aacggtggccttttcggcaatcacattaaccacatcaacggcgacccccaccaaggttcc
gggcatcagaccaacgccacgcagcgccccctgcaggttcatcctcccccgcactacgcc
gacatggaacagcccgtgggccggctggaccgcgccaacgccatggcccaacataatcat
catcaccaccatcatcatcatcacaatcaccacaattcttacagcaagtcacccaagtcc
accaacatcaatctgaacaatgctaacatgtccagcctgcccaatggaggccataatcgt
tactaccagcatgtcccggcgaacggatacaccggatcgtactacccaggggaatatgaa
aagcccaggacgccacatggacagagaaggcgctactatgagacctatattaggtcgcgt
ggcagcatcaggcgccaacccactattcgtcgcgaggaagagattgaggaagaccgctat
tctggggagtactacagcggagaagagttttatgaagaagacggcatgctgtcaggagac
aggtatcccagcagcgatcaggagtacgagactccccgtggctaccatcatcccgacagt
tactatgacgatgacgagcagcccctataccacgactcatataggtcaccaaagagacgg
cggcttcctcccacaccacaaggcaaccggaggccatctttcaactttgagtgtctgcgc
agacagagcagtcaggatgagcttcctcgccagcggactgctcttccgctccatttaatg
caacatcaggtgatggcagtagcagggcttgactggagtagagctcacggactctcgcct
actcgctccactcgttcatgggccacgcctcctgccacgcctgccagtaaagaccgcacc
ccctactacacaccgatgatccgcgtggaccgcccgcaccgggacagcatgggtggcagc
tactgctcggtgaggaagagctcgtggtacacagatgagccggagtaccagcagagcacc
tactcaccggtgcacctgcaaatcccacatgagtaccggaaccagtaccaccagaagaga
ggcagcgccaccagccttgtggaggcggttttgatatcagaaggactgggcagatacgct
aaggacccaaagtttgtggcggctacaaagcatgagatcgcggacgcctgcgatatgacc
atcgacgagatggaaagtgcggcgacccacctgctgaacggcggagtcatgcccagggtc
aacggggttcacgtttacccagtcatgagtcaaatagagtacgatgtgcaggacgtttcg
gccaactacagcgacgaagagccagaacccgaatcccggcctcgttacgaggaggacttg
gcggacgaaatgatatgcatcaccacattatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (13)   
   RefSeq(pep) (13)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

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