[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Pangasianodon hypophthalmus (striped catfish): 113535555
Entry
113535555         CDS       T05759                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03320  PPAR signaling pathway
phyp04148  Efferocytosis
phyp04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    113535555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:phyp03000]
    113535555
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:phyp03310]
    113535555
Transcription factors [BR:phyp03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    113535555
Nuclear receptors [BR:phyp03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   113535555
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 113535555
NCBI-ProteinID: XP_026784749
Position
Unknown
AA seq 501 aa
MDPFYLDIHMGFLKPQCSLAPPPQRGRSGESCSCFSGMCPLHQRRLSTDSGQVTSSPLSS
PTSHRPMHPPLLSPTSIGASGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMASPGMAY
GPSVSPQLNSPMNSVSSSEDIKPPVGINGMMKVPAQSSGTPLSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVFL
HTAVQEERQRAKDRNENEVESSSSANEDMPVEKILEAELAVEPKTETYIETNLGVPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPSEVEALREKVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggatcctttctacttagacatccacatggggttcctgaaaccccagtgctcgctggcg
ccgccccctcagagaggccgctcgggggaatcctgctcctgtttcagcggcatgtgtcct
ctccatcagcgcagactctccacagactcaggtcaggtgacctcatctcctctgagctct
cccacgtcccaccggcccatgcaccctcccctgctgagtccgacctccatcggagcctca
ggatctctgcactcacccatcagcacacttagctcgccaatgaacggcctcggctctccc
ttctccgtcatcagctcgcccatgggcccgcactccatggcatctcccggcatggcctat
ggccccagtgtaagcccacagttaaactcgccgatgaactccgtcagcagctcagaggac
atcaagcctccggtgggcattaacggcatgatgaaggtgccagcgcagtcctcggggacc
cctctgtctctcaccaaacacatctgtgctatctgcggagatcgctcctctggtaaacac
tacggcgtctacagctgtgagggctgcaaggggttctttaagagaaccgtacggaaggac
ctgacctacacctgcagagacaacaaggactgtgtgatcgacaagcgccagcgaaaccgc
tgccaatactgccgctatcagaaatgcctggccatgggcatgaagagagaagtttttttg
catacagccgttcaggaggaacgtcagcgagctaaggatcgaaatgagaatgaggtggag
tcgagcagcagcgccaatgaggacatgcccgtggagaagatcctagaggccgaactcgct
gtcgagcccaagacagagacgtacatcgagaccaacctgggcgtgccgtccaattcgccc
aatgatccagtcactaatatctgccaggcggcagacaaacagctcttcaccctggtggaa
tgggccaagaggatcccacacttctctgaactgcctctggatgatcaggtcatcctgcta
cgagcaggctggaatgagctgctcattgcttcgttctcgcatcgttccatagctgtaaag
gatggcattctgctggccacagggctccacgtgcacaggaacagcgcccacagtgccgga
gtgggagccatattcgacagagtgctcacagagttggtgtcaaagatgagggacatgcag
atggataaaacagagctgggctgcctacgagccatagtgctgtttaacccagactctaaa
ggcctgtcaaaccccagcgaggtggaggctctgagggagaaagtttatgcctctctggag
gcatactgcaagcagaagtaccctgatcaacccgggaggtttgcaaagctgttgctgcgg
ctgcctgcgctgcgttccatcggccttaagtgtctagaacacttgttctttttcaagctc
atcggggacacgcccatcgacaccttcctaatggagatgctggaggcaccccatcaaatg
acgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system