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KEGG   Pantherophis guttatus (corn snake): 117656047
Entry
117656047         CDS       T07329                                 
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
pgut  Pantherophis guttatus (corn snake)
Pathway
pgut04510  Focal adhesion
pgut04512  ECM-receptor interaction
pgut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pgut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117656047
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117656047
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgut04147]
    117656047
   00536 Glycosaminoglycan binding proteins [BR:pgut00536]
    117656047
Exosome [BR:pgut04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117656047
Glycosaminoglycan binding proteins [BR:pgut00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   117656047
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   117656047
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 vWA_SIBA-E Methyltransf_34 DUF7320 Zap1_zf2
Other DBs
NCBI-GeneID: 117656047
NCBI-ProteinID: XP_060539662
Position
Unknown
AA seq 2255 aa
MIYSLINYHNLKMLLTLLLVILGTQTSKTQQPASESVDVVLLIDSSNTLGRQGFLSLKNY
VNRMINNLPIGPNKYHLALVQYSDDIHVEFQLDDFRGKNPMLNHVKKIFSFHGGPLRTGN
AIQKIHKTIFKAPRRDRHQVLIVTTSGVSQDNVEGPATLMRKDGIKIIALGMQSASQQEL
QSMATHPFSYHFDTLKDFQKFSSNILSVIESAVAIDESLVSSTAIPPSTTYAHSIPIKVV
DCSEDLIADVVFVVDEAVSPTNSEYIVSFIQNTTTSLDVQKSCIRIGIVTYSNEPRVLSQ
LNTETEIKDLVFKIKSFSPREGKAKLGAALNLTREIIFTESAGSRKTEGAEQIATIITHR
PSEDSVTEASSLLLQKGVTVFAISIEGANITQLEGVVSYPPNRNIIKVDHFSNLADKSKI
FKKKLFKHIHMFFAQAERTEEFRSGCMETEKADIYFLVDGSSSISPSNFIKMKTFLKEVI
KLFTIGPDHVRFGVVQFGTLYQTEFELDKYTKISHVEKAINNIIQMGVDTYTGAAIQSMQ
PLFEKAKKQRDGEVPSYLIVLTDGEAHDNVLEPSKMLRKSAVNIYAIGVKPANITQLNEI
ADSKSKVYYVEQFDSLKNIKNEIVRDICFEKACEKMKADVMFLVDSSGSISHQDFEKMKK
FMQELIDKCSVGQDEVQFGVVQFSSTNKEEFQLNSSKDYIINAIGNMAQMQQNTYTGKAL
QFVSDYFKPAKGARPSVNKILILLTDGEAHDDVREPASALRKEGVIIYSIGITGANVTQL
VEISGAPKKMFYLKDYDVLKYIENDIVFRICSPYNECKRINRLDLVFVIDSSSSIGETNY
TLMNNFIIGIVNKSDVGKDHVQFGAVKYSNNPEIMFKLNTYNKRSDIIKFIQDNTLLKGD
TYTAKALQLSKGLLTKENGSRIHQGVPQVLMVITDGESHDKAILDSTSNELRKKGTIIYA
IGIKDANREELEIMAGSKDYWFYMPSFEGLESITTNLSNQLCIDSRPECDIEAELVILTD
SRSIPDKELKGVKDFVINLLKSIINKDNILVGMAQFSNTLQEVFQLGAYQNLPELYSKIT
NMSLITGDSTXIGRALREVKTFFKTSKQRVARSINQKLLIFTDGRSDDEFPQAAKDLRDE
GVEIHAVAVGNVTDSKLLQITNSPSRKYKVDHYSDLKTLVNHVNKEICKETTEATCFVDI
IIGFDISSQKPGNNLFSKQQHLESHLPGIIKALTSLSSTSCSKGKKVQFSVTISVENTDK
PFWAKFHHVDDTNIVTELRNVIVNRPSHLNINFLDAIWNLMKNVTDIENRNTVLLLFSDG
LDDNIIALGQKSEEFRIQGLDGLITVSLEGAKYIDQLQHIEFGKGFGYNTQLSVDTENIA
MRLFQYVDQIAERKCCCIFCRCEGEEGPRGERREKGHKGTPGFVGHPGYPGNDGDPGPRG
IPGIQGKQGDIGECGTRGRKGQRGLNGKRGEDGADGVDGIHGEEGSLGFPGLKGEKGDPG
EMGNTGPKGPPGDLGPKSFQGDRGEPGQDNNVRGAKGFKGLSGRMGERGLKGSDGSAGSP
GNKGAEGNPGPLGPKGEEGNPGTDGLQGDQGVQGSLGTTGILGVKGEKGQPGNHGHLGDI
GNEGPKGNQGKLGSRGNKGESGEPGEKGKKGSLGQRGMQGEEGTVGFGNIGRKGRKGIEG
FPGDFGNQGKRGDMGNPGKPGLKGKRGRMAPGLVGDDGELGTWGYPGHLGPKGAKGQSFY
SPCELIEYVQKHSKIPKCPAYPTELVFALDISQDITLQMFEQMKKIVTETVNQTNIRESN
CPVGARVAVVSYSSNTNYLIRFTDFQSKNKLLQELNRLSLQRTTNRRDIGGSMKFVARHI
FKRTLQGANVRKVAVFFSNGESDHPDSIGTAVLEFSALGIQPAVITFKNIPEITQAFEMD
STGLFQVIHLHQKSDLSALKKLQMCVICYDKCKPDESCFRTPPFKPEAYMDAAFILENTR
KISTTGFEELKHFLSRALDSFKISTNPKTSLIGDRIAIVSHAPLNFQFQKEWKLPVKVEF
DLVTYESKRQMKRHIEKSFEKLNGEAALGHAIEWTINHIFSEGLNQREKKAIFIISVGET
SHWDKEVLSDAALRAKCKGYAVFVLSIGPEYDYIELMELASFPLEHHIVQLGRIHKAELE
YAVKFLQPLIHLLKNEIHIYPHPELKRICAKISHQKPSTPFDKTPPNKIHLIDENGSAFP
EYLQSDSLFPEKMVSNAYPSIVPWYRVSTSYSTPI
NT seq 6768 nt   +upstreamnt  +downstreamnt
atgatttattctttgatcaactatcacaatctgaaaatgcttctgactttgctccttgtt
attcttgggacccagacttctaaaacacagcaacctgcctctgagtctgtagatgttgtc
cttctgattgacagctctaataccctcggcagacaaggttttctctcattaaaaaattat
gtgaatagaatgatcaacaatcttccaatagggccaaataaatatcaccttgcacttgtc
caatacagtgatgatatccatgttgaattccagctggatgacttcagaggaaaaaaccct
atgctgaaccatgttaaaaagatcttttcattccatggtgggcctttaaggactgggaat
gccatacaaaagatccacaagactattttcaaggcaccaagaagagacagacaccaggtt
ttgattgttacaacttcaggggtatcacaagataacgtggagggacctgccacattaatg
agaaaagatgggataaaaataattgctttaggaatgcagagtgcatctcaacaagagctg
cagtcaatggccacacatccattcagttaccattttgatacactaaaagattttcaaaag
ttttcctcaaatattttgtctgtcattgaatcagctgtagcaatagatgagagcttagtc
agctccacagctatcccaccaagtacaacttatgctcatagcatacccataaaagttgtg
gattgttctgaagatttaattgcagatgttgtgtttgtggtggatgaagccgtttcacct
acaaatagtgaatatattgtatctttcatacaaaacacaacaacttctcttgatgtgcag
aaaagctgcatcagaattggtattgtgacatacagcaatgagcctcgtgtactttctcaa
ctgaacacagaaacagagataaaagaccttgtatttaaaatcaagagcttttctcccagg
gaaggaaaagctaaattaggtgctgccttaaaccttaccagagaaataatttttaccgaa
agtgctggaagcagaaagacagaaggtgcggaacaaatagctaccatcatcacccacaga
ccctctgaagatagtgtaactgaagcatcaagtcttcttttgcagaagggtgtgacggta
tttgccataagcattgaaggggctaatatcacacaattagagggagtagtatcctatccc
ccaaatagaaatattataaaagttgaccatttttcaaacctggcagataagtctaaaatt
tttaagaagaaactgttcaagcacattcatatgttttttgcccaagctgaaagaacagaa
gagttccgatcaggatgtatggaaacagaaaaggctgatatttactttctcgttgatggt
tcatcaagcatcagtccctccaattttattaagatgaagacattcctaaaggaagtgatt
aagctatttaccataggacctgatcatgttcgatttggagttgttcagtttggaactctt
tatcaaacagaatttgaacttgataagtatacgaaaatcagccatgtagaaaaagccatt
aataatataatccaaatgggagtagatacgtatactggagctgctatacagtctatgcag
ccattatttgaaaaggcaaaaaaacagcgagatggcgaagtcccttcttatctcattgta
ctgacagatggagaagcacatgataatgtgctggaaccttctaaaatgctaagaaagtca
gctgtcaatatttatgctattggtgtgaaacctgctaatatcacacagttaaatgagatt
gcagattcaaaatcaaaggtttactatgtggaacagtttgactccttgaaaaatataaaa
aatgaaattgttcgagacatatgctttgaaaaagcctgtgaaaaaatgaaagctgatgtc
atgttcttagtggacagctctggaagtataagtcatcaggattttgagaagatgaagaag
ttcatgcaagaattgatagataagtgcagtgttggtcaagatgaagtgcaatttggtgtt
gttcagttcagtagcaccaataaagaagagttccaactcaactcatcaaaagattacatt
attaatgctattgggaacatggctcaaatgcaacagaacacttatactggaaaagctctg
caatttgtttctgattatttcaaaccagcaaaaggagcacggccttctgtcaacaaaatt
cttatcctcctcacagatggggaagcacacgatgatgtaagagaaccagccagtgctcta
agaaaagaaggtgtcattatctattctatcgggattaccggtgccaatgttacacaacta
gtagagatcagtggagcacctaaaaagatgttttacttgaaagattatgatgttctgaag
tatatagagaacgacatcgtgtttcgcatatgcagtccatataatgagtgcaaaaggata
aaccgtttagatctggtttttgtaattgatagttctagcagtattggggaaactaactac
actctcatgaataacttcataattggcattgtaaataaatctgatgtaggtaaagatcat
gttcaatttggagcagtaaagtattccaataatccagaaattatgttcaaactgaatact
tataataaaagatcagatatcattaaatttattcaggacaacacacttttaaaaggagat
acatacacagcaaaggctcttcaactctcaaaaggtcttttaactaaagagaatggcagt
cgcatacaccaaggtgtccctcaagttcttatggtcataactgatggagaatctcatgat
aaggcaatactggatagcacttcaaatgaactcagaaagaaaggaactattatttatgcc
attggaataaaagatgcaaatcgtgaggaacttgaaatcatggctggatcaaaagactac
tggttctacatgccatcatttgagggactagaaagcataaccacgaacctgtcaaatcaa
ttgtgcattgattcaagaccagaatgtgatattgaagcagaacttgttatcctaactgat
tccagaagtatccctgacaaagaactgaagggtgtgaaggattttgtgatcaacttgctt
aagtcaattataaataaagacaatattctagttggcatggcccaattcagtaatacgctt
caagaagtattccagctgggagcttatcaaaatctaccagaactgtatagtaaaatcact
aatatgtcactgatcacaggggattccacantaattggacgtgctctcagagaagtaaaa
acctttttcaaaaccagcaaacaaagagtagctcgaagtattaaccaaaaattgctcata
ttcactgatggaagatcagatgatgagtttcctcaagcagcaaaagatctgagagatgaa
ggtgtggaaatccatgcagttgcagtaggaaatgtgactgattcaaagcttctgcagatt
accaactccccaagcagaaaatataaagttgaccattacagtgatctaaaaactcttgta
aatcatgtaaataaggaaatttgtaaagagactactgaagcaacatgttttgtagatatt
attattggatttgatatatcatctcagaagccaggaaacaatttattcagtaagcaacaa
catttggagagtcatcttcctggtattataaaagccctaacatctttaagcagcacaagt
tgctctaagggtaaaaaagtacaattcagtgtgactatttcagtagaaaatacagataaa
cctttctgggcaaaatttcatcatgttgatgacaccaatatagtaacagaactcagaaac
gttattgttaacagaccatctcatctcaacatcaacttcttagatgctatttggaattta
atgaaaaatgtgactgacatagaaaatcgaaacacggtattacttcttttctcagatggc
ttggatgataatataatagcacttggacaaaaatctgaagaatttagaatacaaggacta
gatggactaataacagtttccctggaaggagccaaatatattgatcaacttcagcatatt
gagtttggaaagggatttggatataacactcaattatctgttgacacagaaaatattgct
atgaggctctttcagtatgtggaccaaattgctgagcgaaaatgctgctgcatattttgt
aggtgtgagggagaagaaggaccccgtggagaaagacgagaaaaggggcacaagggtaca
cctggttttgtgggacatccaggatacccaggaaatgatggagacccgggtcccagggga
atccctggaattcaaggaaagcaaggtgatataggagaatgtggcactaggggacgaaaa
ggtcaacgaggactgaatggaaaaaggggagaggatggggctgatggagttgatggaatt
cacggggaagagggatcacttggatttcccggactaaaaggcgaaaaaggagatccagga
gaaatgggcaatacaggacccaaaggccctcctggtgacctgggaccaaaaagcttccaa
ggagatcgtggtgaacctggacaagacaataatgtaagaggagcaaaaggtttcaaagga
ctgtcaggaaggatgggagaaagaggattaaaaggttcagatggctcagcaggatcacca
ggaaataagggagctgagggaaaccctggacctctaggtccaaagggagaggaaggaaat
cccggtacagatggtttacaaggagatcaaggagttcaaggttccctgggaacaactggt
attcttggtgtgaaaggagaaaaaggacaaccaggaaaccatggccatctaggagatatt
ggaaatgaaggacctaaagggaatcaagggaagcttggatccagagggaataagggagaa
tctggggaacctggagagaaaggaaaaaaaggttcccttggccagcgaggaatgcaggga
gaagaaggaactgtcggttttggcaatataggaaggaaaggaagaaagggtatagaagga
ttccctggagactttggaaaccagggaaaacgtggagatatgggcaatcctggaaaacct
ggactaaaaggaaaaagaggaagaatggctccaggattagttggtgatgatggcgaacta
ggaacatggggttatcctggacacctgggtccaaaaggagcaaagggccaatccttctat
tcaccttgtgaacttattgaatatgtacagaaacatagcaaaataccaaaatgtccagca
tatccaacagaattagtgtttgctttggatatatcccaggatatcacactacagatgttt
gaacagatgaaaaagatagtcacagagactgtgaaccaaacaaacatcagagagagcaat
tgtcctgtgggagccagagtggctgttgtgtcctacagctccaacaccaactatctgatc
cgctttacagatttccagagcaagaacaagttgttgcaggagctcaatagactttctttg
cagagaacaaccaatagacgcgacattggcggatcaatgaagtttgttgccaggcatatc
ttcaagcgaactctccaaggtgctaatgtgagaaaagttgctgtcttctttagcaatgga
gaatctgaccatcctgactcaattggtacagcggttctagagttcagtgccttaggtatc
cagccagcagtcattacttttaaaaacatccctgaaattacccaagcttttgagatggac
agcacaggattatttcaagttatccacctccatcagaagagtgatctttcagccttaaaa
aaacttcagatgtgcgtaatttgctatgacaaatgcaaaccagatgaatcttgcttcaga
actccacctttcaaacctgaagcttatatggatgctgcattcattctggaaaataccagg
aaaataagcactactggatttgaagaactaaaacatttcctaagtagagcattggacagc
tttaaaatttctacaaatccaaaaacctctttgataggtgatcggatagctattgtgagt
catgctccactgaatttccaattccaaaaagaatggaagcttccagtaaaagttgaattt
gacttggtgacatatgaaagtaaaagacaaatgaagaggcatattgaaaagtcttttgag
aaactaaatggagaagcagcacttggccatgccatagaatggacaatcaatcatatcttt
tcagaaggacttaaccagagagagaaaaaggctatttttatcatatctgttggggaaaca
agtcattgggacaaggaagtactgagtgatgcagccctaagagccaaatgcaaaggctat
gctgtatttgtactttcaataggacctgagtatgattacatagaacttatggaactggca
agctttcctttggaacatcacatagtacagcttggcagaatccacaaagctgaacttgag
tacgcagtcaaatttctgcagccattaatacatctgctcaaaaatgaaatacacatctat
ccacatccagagctcaagagaatatgtgcaaaaatcagtcatcaaaaaccaagcactcca
tttgacaagactccaccaaataaaattcatttaattgatgagaatggctctgcttttcca
gaatacctgcaaagtgattctttattccctgaaaagatggtcagcaatgcttatccatct
attgtgccttggtacagagtatcaacgtcttacagtactcccatctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (12)   

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