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KEGG   Poecilia formosa (Amazon molly): 103144574
Entry
103144574         CDS       T07984                                 
Symbol
rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pfor  Poecilia formosa (Amazon molly)
Pathway
pfor03320  PPAR signaling pathway
pfor04148  Efferocytosis
pfor04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:pfor00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    103144574 (rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfor03000]
    103144574 (rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pfor03310]
    103144574 (rxra)
Transcription factors [BR:pfor03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    103144574 (rxra)
Nuclear receptors [BR:pfor03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   103144574 (rxra)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 103144574
NCBI-ProteinID: XP_007561687
Ensembl: ENSPFOG00000011556
Position
Unknown
AA seq 501 aa
METKPFLSLGFLKPQCSLAPPMQRGRSSEACSCFSGVCPLHQRRLSSDSSGQVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLTSPFSVISSPMGPHSMNSPGMGY
GPSISPQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVLL
HAAVQEERQRAKDKNENEVESTSCANEDMPVEKILEAEEAVEPKTETYIETNLGMPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggaaaccaaaccgttcctgtcattggggtttttgaagccccagtgctcattggctccc
cccatgcaacgaggtcgttcgtctgaggcgtgttcatgtttcagcggtgtttgtcccctc
catcagcgtcgcctatcctcagattcttcaggacaggtgacctcctcacctttaggctct
cctacttcccatcgtggaatgcatccctctttgctgagccccacctccatgggaccctct
ggctctctccattctcccatcagcaccctgagttcaccgatgaacggcctcacctcaccc
ttctcagtcattagctcacccatggggccgcactccatgaactcacctggaatgggctac
ggccccagcatcagcccacagttgaactctccgatgaactcggtcagcagcacggaggac
attaagcccccgctgggcctcaatggcgtgatgaaggtgcccgctcagccctcaggcacg
gctctgtcgctcaccaaacacatctgcgccatctgcggcgaccgctcctcaggaaagcac
tatggtgtctacagctgtgaaggctgcaaaggcttcttcaaacgaaccgttcgcaaggac
ttgacctacacctgccgcgacaacaaggactgtgtcatcgataagcgccagaggaaccgc
tgtcagtactgccgctaccagaagtgcttggccatgggcatgaagagagaagttttgtta
catgcagccgtccaggaggagcgccagcgggccaaggacaagaacgagaacgaggtggag
tccaccagctgcgcgaacgaggacatgcccgtggagaagatcctggaggccgaggaggcg
gtggagcccaaaaccgagacctacatcgagaccaacctggggatgccgtccaactcgccc
aacgacccagtgacaaatatctgtcaggcagcagacaagcagctttttactctggtggag
tgggccaagaggattccccacttctcggagctgccgctggacgaccaggtcatcctgcta
cgagcaggttggaatgaactcctcattgcatcattttcgcaccgttccatcgcagtaaag
gatgggattctgttggcgacgggcctgcacgtgcatcgcaacagcgcccatagtgccgga
gtgggagccatctttgacagggtgctcacagagctggtgtcaaagatgagagacatgcag
atggataagactgagctgggttgcctccgagccatcgtccttttcaacccagactctaaa
ggtttgtccaacccaggtgaggttgaagctctgagagagaaagtctacgcgtctttagag
gcttactgcaaacagaaataccccgagcagccgggcaggttcgctaagctgttgctacgg
ttaccagcgctgcgctccatcgggctcaagtgtttggagcaccttttcttcttcaagctg
attggcgacacacccatcgacaccttcctcatggagatgctagaagctcctcatcaaatg
acataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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