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KEGG   Pelecanus crispus (Dalmatian pelican): 104034035
Entry
104034035         CDS       T08340                                 
Symbol
SCN4A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pcri04040]
    104034035 (SCN4A)
Ion channels [BR:pcri04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   104034035 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH TPR_TTI1_C
Other DBs
NCBI-GeneID: 104034035
NCBI-ProteinID: XP_009485151
Position
Unknown
AA seq 1845 aa
MAGLPHIPGPENLRPFTPASLAAIEQRIAEAEALKVKKQQVELPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGIPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSYPCPLXCFKLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLI
KILSRGFCINDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIP
GLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLMGDL
GLDNNTLANTTLYGNFTDGIASNFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDA
GKCPEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIF
FVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKHQEEQEKML
QDQRSSSGSLPSSVAEKERNSDLNSDQDKAKDCNGQVVPKVVLERSATVLGFNPAAEPEK
SDQNHLTVGNQDGPGLEKRVGSAISVVSNAVEELEEAHQKCPPWWYKFAHTFLVWNCCPL
WLKLKAFVKLVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFQNVLTVGNLVFTGIFTA
EMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSW
PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISLDCTLPRWH
MNDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLS
SFSADSLAASDDDGEMNNLQIAIGRITKGIDFVKSSVLMLLRRLWKGKKVAPEEEQEHSK
RDNSVLNHVDTGQEPKSEYLDGVTGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLYE
ETSTQSDTEDAKNPLSSDNASSLCSTVDYKPPPLVEEEVAEEAEDKNEPKECFTEACVKR
FPCLYVDITSDKGKVWWNIRRTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRRVI
RTILEYADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSE
LGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYRCINTTSGELFDISVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVA
TFKGWMDIMYAAVDSREIEEQPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQ
KKKLGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMI
LICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDF
VVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGL
LSPILNSGPPDCDPNLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENF
NVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKL
ITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTT
LKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALREDAPEKEGLIATKMHEM
YGNSGTDVETAPAFGLAPVPSSETRNAPGEAKVWDKERVVKESLV
NT seq 5538 nt   +upstreamnt  +downstreamnt
atggccggcctgccgcacatcccgggccccgagaacctccgtcccttcacccctgcctca
ctggccgctatcgagcagcgcatcgccgaagcagaggcactcaaggtaaagaagcagcaa
gtggagctgcctgaggaagaggagatcaagcccagcagtgacctggaagccggcaagaac
ctgcccctcatctatggtgacccaccactggagctcatcgggatccccctggaggacctg
gaccctttctacaaggataagaagacattcatagtcctcaacaaagggaagtccatcttc
cgcttctcagcaacccctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtgcttatccattcatatccttgccctctgtgatgttttaaattattcagc
atgttcatcatgatcacgattttaaccaactgtgtgtttatgacactgagcaacccccca
gcgtggtccaagaacgtggaatacaccttcactggaatatacacctttgagtccctcatc
aagatactgtcgagaggcttctgcatcaatgacttcacattcctgcgtgacccatggaat
tggctggacttcatggtcatctccatggcctacattaccgagttcgtggacctggggaac
atctctgctctcaggaccttccgcgtcctccgtgccttgaaaaccatcaccgtgatacca
gggctgaagacgattgtgggggctctgatccagtcagtgaagaagctctcagatgtcatg
atcctcaccgtcttctgcctgagtgtgttcgccctaatcggtcttcagctcttcatggga
aacctccggcacaagtgtgtgcggtggccccccctcaacgacaccctgatgggggatttg
gggctggacaacaacacgctggccaacacaacactctacggtaacttcaccgacggcatt
gccagcaacttcaccagcaacagcacctttgattttgaggcctacatcaatgatgaagcc
aatttctactttctggagggagctcttgacgccctgctctgcgggaacagcagtgatgct
gggaagtgccctgaagggtaccagtgcatgaaggcggggaggaacccgaactacggctac
accagctacgacaccttcagctgggctttcctggccctcttccgcctcatgacgcaggac
ttctgggagaacctcttccagctgacgctgcgtgcagcagggaaaacgtacatgatcttc
ttcgtggtggttatatttcttggttccttctacctcatcaacctcatcctcgcagtggta
gccatggcttacgcagaacaaaacgatgccacgatgctggaggaacagcagaaggaggag
gaatttcagcagctcatggagcagctgaagaagcatcaagaggagcaagagaagatgttg
caggaccagcggtccagcagcggttccctgcccagcagcgtggctgagaaggagcgcaac
tcggacctgaacagtgaccaggacaaggcaaaggactgcaacgggcaagtggtccccaag
gtcgtgctggagcggtctgccacggtgcttggtttcaacccagccgctgagccggagaaa
tcagaccagaaccacctcactgtgggcaaccaagatgggccaggcctcgagaagagggtg
gggagcgccatcagtgtcgtctccaacgctgtggaagagctggaggaagctcaccagaag
tgcccgccctggtggtacaaatttgcccacacgttcctggtctggaactgctgccctctg
tggctgaagctgaaggcatttgtcaagctggtggtgatggaccccttcgtggacctgggc
atcaccatctgcattgtgctcaacacagtcttcatggccatggagcattaccccatgaca
gaggagtttcagaacgtgctgaccgtggggaacctggtctttacgggaatcttcacagcg
gagatggtcctgaagctcattgctttggacccctacgagtatttccagcagggctggaat
atctttgacagcatcatcgtcaccctgagcctggtggagctgggcctggccaatgtgcaa
gggctctccgtgctccgctcattccgcttgctgagggttttcaagctcgccaagtcctgg
cccaccctcaacatgctcatcaagatcatcggtaactcggtgggcgccttggggaacctt
acgctggtgctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggg
aagagctacatagagtgcgtgtgcaagatctcccttgactgcacgctgccccgctggcac
atgaatgacttcttccactccttcctcatcgtcttccgcatcctctgtggggagtggatt
gagaccatgtgggactgcatggaggtggctggccagaccatgtgcctcatcgtcttcatg
atggtcatggtcatcgggaaccttgtggtgctgaacctgttcttagctttgctgctgagc
tccttcagcgccgatagcctggcggcgtctgacgacgacggagagatgaacaatttgcag
atcgctattggcaggatcaccaaggggatcgactttgtaaagtcatctgtcctcatgctg
ctccgcaggctgtggaaggggaagaaggtggccccggaggaagagcaagagcacagtaag
agggacaactctgtgctaaaccatgtggacactggccaggagcccaagtcagagtacctg
gatggagtcactggcaaagagcattttttcatggatgaactggaccacatgaatttcatt
aacaaccccaacctgacggtgcaagtccccatcgcctcggaggagtctgacctctatgag
gagacaagcacccagtctgacaccgaagatgccaagaatcccctctccagtgacaatgca
tcatccctgtgcagcaccgtggattacaagcccccaccgctggtggaggaggaggtggcg
gaggaggctgaggacaagaacgagcccaaggagtgcttcaccgaagcctgcgtgaagaga
tttccctgcctctatgtggacatcaccagcgacaaagggaaggtatggtggaacatccgg
agaacctgcttccgcattgtggagcatgactggttcgagaccttcatcgtcttcatgatc
ctcctcagcagcggggcgctggcttttgaggacatctacattgaacaacgaagggtgata
cgcaccatcctggagtacgctgacaaggtcttctcctacgtcttcgtcattgagatgttg
ctcaagtgggtggcctacggcttcaaggtgtacttcaccaacgcgtggtgctggctggat
ttcctcattgttgatgtttctattatcagcctgacagcgaactggctgggatactccgag
ctgggagccatcaagtccctgcggaccctcagagctctgagaccactgcgtgccctgtcc
agatttgaaggcatgagggtggtggtgaacgccttgctgggtgccatcccctccatcatg
aacgtcctgctggtctgcctcatcttctggctgatattcagcattatgggggtgaacctc
tttgcggggaagtactaccgatgcatcaacaccacctcgggggagctcttcgacatcagc
gtggtgaacaacaagagcgactgcatggccctcctctacaccaacgaggtcagatgggtc
aacgtcaaggtcaacttcgacaacgtgggtttgggatacctctccttgctgcaggtggcg
accttcaaaggctggatggacatcatgtacgccgccgtggactcgcgcgagattgaagag
cagccagtgtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatcttc
ggcgccttcttcaccctgaacctcttcattggcgtcatcattgacaacttcaaccagcag
aagaaaaagcttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaac
gccatgaaaaagctcggctccaagaaaccccagaagcccatccccaggccatcgaacaag
tttcaagggatggtgtttgactttgttaccaagcaagtgtttgacataaccatcatgatc
ctgatttgtcttaatatggtgaccatgatggttgaaacagatgatcaaagtgaactcaaa
acatctgtcctctacaagatcaacctggtcttcattgtcatcttcaccggagagtgtgtg
ctcaaaatgtttgccttgcgctactactacttcactattggctggaacatctttgacttt
gtggtggtcatcctctccattttaggtatcgtcctctcggacatcatagagaaatacttt
gtatcacccaccctcttcagggtcatcaggctggcaaggattggccgtgtcctccggctg
atccgaggggcaaaaggcatccggactctcctgtttgctctgatgatgtccctgcctgcc
ctgttcaacatcggcctcctgcttttcctcgtcatgttcatctactccatctttgggatg
tccaattttgcctatgtaaagaaggaggcagggatcgatgacatcttcaactttgaaact
tttgggaacagcatcatctgcctctttcagatcaccacatcagctggatgggatggcctc
ctcagcccaatcctgaacagtggcccccccgactgcgaccccaacctggaaaaccctggc
agttcggtaaaaggggattgcggcaatccgtccatcggcatcttcttcttctgcagctac
atcatcatttcctttctcatcgtggtgaacatgtacattgccatcatcctggagaacttc
aatgtggccacggaggagagcagcgaacccctctgtgaagacgattttgaaatgttttac
gaaacctgggagaagtttgacccggatgccacccagttcattgcctacagcaccttgtct
gactttgtagacaccttgcaggagccgctcaaaattcccaagccaaacaagatcaagcta
atcaccatggatctaccaatggttgctggggacaaaatccactgtctagatatcctcttc
gccctgactaaggaagtgctgggagactcaggagagatggatgccttgaaggccaccatg
gaggagaagttcatggctgcaaatccctcaaaggtttcctatgaacccatcaccaccact
ctgaaaaggaaacatgaggaagtctgtgctacaaaaatccagagggctttccggaggtac
ctcctgaggcgctcggtgaagcaggcatcctacatgtacaggcacagtaaggatgaggat
gccctgagagaggacgcacccgagaaggaaggtctgattgccaccaaaatgcacgagatg
tatgggaacagtgggacagatgtggagacagcccctgccttcggtcttgcacccgttccc
agctcagagactcgaaatgctcctggtgaagcaaaagtatgggataaggaacgtgtcgtg
aaagagtcgctggtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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