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KEGG   Procambarus clarkii (red swamp crayfish): 138349677
Entry
138349677         CDS       T07930                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pcla  Procambarus clarkii (red swamp crayfish)
Pathway
pcla04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pcla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    138349677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcla03000]
    138349677
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pcla03310]
    138349677
Transcription factors [BR:pcla03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    138349677
Nuclear receptors [BR:pcla03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   138349677
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 138349677
NCBI-ProteinID: XP_069178803
Position
11:42225070..42255088
AA seq 537 aa
MIVIKKEKPVMSVSSIIHGSQQRGWTPGELYDDWGGRAGTPGLEIGMSGSVERQSPLSVA
PDTLLSPSSTSTFSTTNGGPASPSFSHCEYSPCSFSISTPPFTIGSSGNMLSSSNSSSNS
LSTSPNQYPPSHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRED
RSCTIDKRQRNRCQYCRYQKCLSMGMKREAVQVGAVEEERQRTKGDKGDGDTESSCGGIS
DMPIASIREAELSVEHTNEHPLDQGNQDEPARSTSPSSPAMTTLSPSCLQPILPADVTMG
TTLGGGRGDDAVRGVGHKFPAQAYNTNYQRGNQDALTNICQAADRHLVQLVEWAKHIPHF
TDLPVDDQVVLLKAGWNELLIASFSHRSMGVEDGIVLATGLVVHRSSAHQEGVGAIFDRV
LSELVAKMKEMKMDKTELGCLRSIVLYNPDAKGLTCCNDVEILREKVYAALEEYTRTSYP
EEPGRFAKLLLRLPALRSIGLKCLEYLFLFKLIGDTPLDNYLMKMLMENPNNTSPSS
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgattgtcatcaagaaagagaagccggtcatgtccgtgtcgtccatcatacatggctcc
caacagcgggggtggacaccaggtgagctgtatgatgactggggcggccgcgccggcaca
ccaggtctggaaatcggcatgtcagggtcggtggagcggcagtcacccttgagcgtggcg
cccgacaccctactctccccctcctccacctctaccttctccaccaccaatggcggacca
gcctccccaagtttttcacattgtgagtattcgccgtgttctttcagtatatcaacgcct
cccttcaccattgggtcgagtggtaatatgctcagttccagcaacagcagcagcaacagc
ctgagcacctcacccaaccagtaccctcccagtcacccgttgtcgggctccaagcacttg
tgttccatctgcggcgaccgtgcctctggcaagcactatggcgtctacagctgtgagggc
tgcaaaggatttttcaaacgaacagttcgcaaagacctaacttatgcctgtcgagaggac
agatcctgcaccattgacaagagacaaaggaaccgatgccagtattgccgataccagaaa
tgtttatccatgggcatgaagagagaagcggtccaggtaggggcagtagaggaggagcgc
caacgtacaaaaggagacaaaggagacggcgacacagaatcatcatgtggaggcatctcg
gatatgccaattgcaagtatccgtgaggcagaactcagcgttgaacatacaaatgagcat
ccacttgaccaagggaatcaagatgaacccgcccgatctacgtccccatcgagcccagcg
atgaccactctctctccttcctgtcttcagcccatcttgccagcagatgtgaccatgggc
actaccctggggggagggaggggagatgatgcagtgaggggtgttggccacaagtttcca
gcccaagcttacaacaccaactatcagagaggcaaccaggatgctttaaccaacatttgc
caggctgcagacagacacttagtccaactggtagaatgggccaagcacatcccacacttc
acagaccttcctgttgatgaccaagttgtcttacttaaggctggttggaatgaactactt
attgcgtccttttcacatcgaagtatgggagttgaagacgggattgtactagctacagga
ctcgtggtacacagaagtagtgctcatcaggaaggtgtgggggcaatttttgaccgagtg
ttatcagagttggttgctaaaatgaaagagatgaagatggacaagacagaattaggctgt
ctgcgctccatagttctctataacccagatgctaagggactcacatgctgtaatgatgtg
gagattctacgcgagaaggtttacgcagcactagaagagtacacacgtactagctaccct
gaagaacctggcaggtttgccaagctattgctacgactaccagcgctcagatcaattggc
ttaaaatgcctagagtatctctttttgtttaagctaattggagatacacctctggacaac
tacttgatgaaaatgcttatggaaaaccccaacaacacttccccttcaagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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