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KEGG   Pomacea canaliculata (golden apple snail): 112574661
Entry
112574661         CDS       T05881                                 
Name
(RefSeq) retinoic acid receptor RXR isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
pcan  Pomacea canaliculata (golden apple snail)
Pathway
pcan04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    112574661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcan03000]
    112574661
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pcan03310]
    112574661
Transcription factors [BR:pcan03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    112574661
Nuclear receptors [BR:pcan03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   112574661
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 112574661
NCBI-ProteinID: XP_025111647
Position
LG11:complement(17700674..17788934)
AA seq 442 aa
MDRSEMDTLENNGPGSGGMPGGMYMGHPPPDIKPDLATLNSPTSTHGPYYGYGPGGSMPG
MPPSTQPSPGVPNMSSGMHSPTSSLGSPPMMCLSPTGPSPSPGMPHSSLHNKHICAICGD
RASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRNRCQYCRYMKCLQQGM
KREACLSTAAVQEERQRVKEKGDGEVESTSGANSDMPVEQILEAELAVEPKLETFIDTQK
QRDPVTNICQAADKQLFTLVEWAKRIPHFTELPLEDQVILLRAGWNELLIGGFSHRSVAV
KDGILLATGLHVHRSSAHQAGVGTIFDRVLTELVAKMREMKMDKTELGCLRAIVLFNPDA
KGLSAVSEVEQLREKVYASLEEYCKTRYPDEPGRFAKLLLRLPALRSIGLKCLEHLFFFK
LIGDTPIDTFLMEMLESPSPST
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggatcgttcagagatggatactttagaaaacaatggaccaggatctggaggtatgccg
ggtggaatgtacatgggtcacccaccacctgacattaaacctgatctggccacattgaac
tctccaacttcaacacatgggccatattatggatatggtccaggtggttcaatgccgggt
atgcctccgtctacacagccctcacctggagtacctaacatgtcctcaggaatgcattca
cccacctcctccttgggctcccctcccatgatgtgcctctcccctacaggcccctcccct
tccccagggatgccacactcctcactgcataacaagcacatttgtgctatttgtggtgac
agagcttcaggcaaacattatggtgtctacagctgcgagggctgtaaaggattcttcaaa
agaactgtgcgtaaagatctgacatatgcatgtcgagatgacaaaaactgtatgatcgat
aaacgacagcggaatcgctgccagtactgccgttacatgaaatgtcttcagcaaggcatg
aagcgagaagcctgtctgtccactgcagctgtgcaagaggagcgccagcgtgtcaaggaa
aagggcgatggagaagtggaaagcacctctggtgccaacagtgacatgccagtggagcag
atcttagaggctgagcttgctgtggaacccaagcttgagactttcattgatacacagaaa
cagagagatcctgtgacaaacatctgccaggcagctgacaagcagctattcactttggtt
gaatgggccaagcgaattcctcactttactgaactgcctctcgaagaccaagtcatcctg
ctaagggcagggtggaatgagctgctgattggcggcttctcgcatcgttcggttgctgtg
aaggatggtatcttgttggcaactggtcttcatgtgcatcgtagcagtgctcatcaggct
ggcgtgggcactatttttgaccgagtgctgactgagctggtggccaaaatgcgcgagatg
aagatggataagacagaacttgggtgtctgcgagccattgtcctctttaacccagatgcc
aagggcttgtctgcagtatcagaagttgagcagcttcgcgaaaaggtttatgcttcgctg
gaagaatactgcaagacacgctaccctgatgagccaggacgctttgccaagttgctgctg
cgtcttcctgccttgcgctcaattggcttgaagtgcctggagcatcttttcttctttaag
ttgattggggacactcccatagacacttttctcatggaaatgttggaaagtccttctcca
tccacatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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