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KEGG   Panicum virgatum (switchgrass): 120650207
Entry
120650207         CDS       T07260                                 
Name
(RefSeq) membrin-11-like
  KO
K08496  golgi SNAP receptor complex member 2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120650207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120650207
Membrane trafficking [BR:pvir04131]
 SNARE
  SNAP-25[N] (Qb)
   Bos1 / Membrin
    120650207
SSDB
Motif
Pfam: V-SNARE_C Sec20 SpoVR Mononeg_mRNAcap KATNA1_MIT Fmp27_WPPW
Other DBs
NCBI-GeneID: 120650207
NCBI-ProteinID: XP_039783171
Position
9K:13672349..13675339
AA seq 241 aa
MEYSGGGGGGATLSDMYQSARRLLLSARDGVARVERLSSAPTSSSYSSAPLVGGGAPGDP
AVAEEVRREVAQIQGLCAQMDRLWRSIPGKGQRDLWKRKVEQLSEEVDSLKETLDRHTLR
QQKRILEAKERAELFERANGESSHVLRIFDDEAQAMQSARSSSRMLEEAYDTGVAILHKY
ADQRDRLKSAQRKALDVLNTVGLSNSVLKLIERRHRVDKWIAYAGMIITIVVMIAFWRLT
H
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaatactccggcggcggcggtggcggcgcgacgctgtcggatatgtaccagagcgcg
cggcggctgctgctctcggcgcgcgacggcgtggcccgcgtcgagcgcctctcctcggcg
cccacctcgtcctcctactcctcggcgcctctcgtcggtggaggcgccccgggggaccct
gcggtcgccgaggaggtgcggcgggaggtggcacagatccaggggctctgcgcgcagatg
gatcggctctggcggtccatccccggcaagggccagcgggacctctggaagagaaaagta
gagcagctgtctgaagaggttgattcactgaaggagacccttgacaggcatactttgcgt
caacaaaagcggattctggaagcaaaagaaagggcagagctgttcgagagagctaatggt
gagtcctcacatgtccttcgaatatttgatgacgaagcccaggcaatgcagtcagctcgc
agctcctcacgtatgcttgaagaagcttacgatacaggtgtcgctatccttcacaaatat
gcagaccaaagggaccgacttaagagtgctcaaaggaaagctttggatgtcctgaacact
gttggtctatcaaactctgttttgaagcttatcgagaggcggcaccgcgtggacaaatgg
atcgcatatgctggcatgatcataaccatagttgtgatgattgctttttggcggttgacg
cattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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