[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Puntigrus tetrazona (Sumatra barb): 122353965
Entry
122353965         CDS       T08985                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010  MAPK signaling pathway
ptet04020  Calcium signaling pathway
ptet04218  Cellular senescence
ptet04260  Cardiac muscle contraction
ptet04261  Adrenergic signaling in cardiomyocytes
ptet04270  Vascular smooth muscle contraction
ptet04530  Tight junction
ptet04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ptet04040]
    122353965 (cacna1da)
Ion channels [BR:ptet04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   122353965 (cacna1da)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel FAM176
Other DBs
NCBI-GeneID: 122353965
NCBI-ProteinID: XP_043107816
Position
11:8348650..8435219
AA seq 2113 aa
MSANGPAPPAATPAAPPAASVPVPSVVPVGSLAQKKRQQYAKSKKQGSSANTRPQRALFC
LNLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYIPFPEDDSNSTNHDLETVEYAF
LIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEILTKDGEKETAGT
HPSAHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLF
VIIIYAIIGLELFIGKMHATCYFQGTDIAEDEPAPCAVNGHGRTCPINGTMCREGWHGPN
GGITNFDNFMFAMLTVFQCITMEGWTDVLYWMNDAMGLELPWVYFVSLVIFGSFFVLNLV
LGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEDEESKR
NRVTLASLMEKKKKGFSWFSQSSDTHASMPASETESMNTENEKGEDEKATCCGPTCQKIS
KSKFSRRWRRWNRLCRRNCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPMWLTQVQDV
ANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVEFEIMSPLGISV
FRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKFN
FDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFI
CGNYILLNVFLAIAVDNLADAESLNTDSDDKKKGDENEENEDDAKAGEEDEKDNAEEDED
EPDVPAGPRPQISELVKKEKITPIPEGSAFFIFSNTNPVRVACHKLINHHIFTNLILVFI
MLSSASLAAEDPIRNFSARNIILGYFDYAFTAIFTVEIVLKVLGYADYVFTSMFTFEIVL
KMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAIN
RAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCNDETKSSPEECK
GTYILYKEGDVNQPIIQKRHWHNSDFNFDNVLMAMMALFTVSTFEGWPALLYKAIDSNRE
NLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCV
EYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLILLNTICLAVQHYGQSELFNYV
MDILNMVFTAVFTVEMVLKLIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEVNPTEAPQ
VDESGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAML
FFIYAVIGMQVFGKIAMVDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACMPGKL
CDPESDYNPGEEMTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPH
HLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNS
DGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDE
VTVGKFYATFLIQDYFRKFKKRKEEGLVGVHPAQNNTAIALQAGLRTLHDIGPEIRRAIS
CDLQDDELVDFIPEEDEEIYRRNGGLFGNHINHINGDPRRSSGHQTNATQRPLQVQPPPH
YAHMEQPVGRLGRANAMAQQNHHRHHHHHHHHHHHHNSYNKSPKSTNINLNNANVSSLPN
GGHSRYYEHMPANGYPGSYYGEYDKPRTPHGQRRRYYETYIRSQGSDRRRPTIRREEEYE
EDRYSGEYYSGEEFYEDDSMLSGERYPNSDQEYETPRGYHHPDSYYEDDEQPLYHDSRRS
PKRRLLPPTPQGNRRPSFNFECLRRQSSQDDLPHQRTALPLHLMQHQVMAVAGLDSSRAH
RLSPTRSTRSWASPPPTPASKDHTPYYTPLIRVDRPLRDSAHSSHSSIRKSSWYTDDPEY
QRNFSPVHLQVPPEYRNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADAC
EMTIDEMESAASHLLNGGITPGVNGVNVFPIMGPRDYEMQDVSASYSDEEPESEPRPQYE
EDLADEMICITTL
NT seq 6342 nt   +upstreamnt  +downstreamnt
atgagcgccaacggccctgctccgcctgctgcgactcctgcagcgcccccggcagcctcc
gtacctgtaccctcggtggtaccggtcggctcgctggcccagaagaagcggcagcagtat
gccaagagcaaaaaacagggcagttcggccaacacacggccacagagagctctcttctgc
ctcaacctcaacaaccccatccgccgggcctgcatcagcctcgtggaatggaagccattt
gatatctttatattgatagcgattttcgccaactgcatggccttagctgtatacatcccc
tttcccgaggatgattccaactcaaccaaccacgacctggaaacagtcgaatatgccttc
cttatcattttcactattgaaaccttcctgaagatcatagcatatggcttggtgatgcat
cagaatgcgtatgtccgaaatggatggaacatgctggatttcgtcattgtcgtcataggg
ttgtttagtgttgtcttggaaattttgaccaaagatggggagaaggagactgctggaacc
cacccgtccgctcacggtcatggagggaaaccgggaggtttcgatgtcaaagccctcaga
gcctttcgagtgctgcgaccgcttcgcctggtctcaggagtgcccagtttacaggtggtg
ttgaactccatcattaaagccatggttcctcttctccacatcgccctgctggttctgttc
gtcatcatcatctacgccatcatcggtttggagcttttcattggaaaaatgcacgctacc
tgttactttcaagggacagatattgccgaggacgaacccgcgccgtgtgccgttaacggt
catggccgtacatgccccattaacggcaccatgtgtagggagggctggcacgggcccaac
ggaggcatcacgaacttcgacaacttcatgtttgccatgcttactgtgttccagtgcatc
accatggagggctggacagatgtgctctactggatgaatgatgctatggggttggagctg
ccctgggtgtactttgtgagcttggtcatcttcggctctttcttcgtcttgaacctggtt
ctgggtgtgttgagcggggagttctctaaagagcgagagaaggcgaaggctcgtggagat
ttccagaagctacgggagaagcagcagctggaagaagatctgaaaggttatctggactgg
atcacgcaagccgaagacatcgaccctgagaacgaggaggaagatgaggaaagcaaacgc
aaccgggttacactggccagcctgatggagaagaagaagaaagggtttagctggttcagc
cagtcctctgacactcatgcgagtatgccggcgagcgagacagaatccatgaatacagaa
aatgagaaaggagaagatgagaaggcgacatgttgtggcccgacatgtcagaagatttca
aaatcaaagttcagtcggcgctggcgtcgatggaacaggttgtgtcggaggaattgtcgt
ttggctgtgaaatctgtgccgttctattggctggtgatcatcctggtgttcctcaacact
ttgaccatctcttcggaacattacaaccagcccatgtggctcacgcaagtccaggatgtg
gccaataaagtgctgctggccctgttcacgtgtgagatgttggtgaagatgtacagtctg
ggcctgcaggcttattttgtgtctctgtttaatcgctttgactgcttcgtggtgtgtgga
ggcatcaccgagaccatcctagtcgagtttgagatcatgtcacctctaggcatctcagtg
tttcgatgtgtgcgacttctcaggatctttaaagtcacacgtcattgggcctctctcagt
aacttggtggcatctctgctgaactccatgaagtccatcgcttctctgctgctactgctc
ttcctcttcatcatcatcttcagcctcctgggtatgcaggtgtttggcggcaagtttaac
ttcgacgagacgcaaacgaagaggagcacctttgacaacttccctcaggctttgctcact
gtgtttcagatcctgactggtgaagactggaatgccgtcatgtatgatggaattatggca
tacggtggcccttcatcatcaggaatgatcgtgtgcatctactttatcattcttttcatt
tgtggaaactacattcttctgaatgtgttcttggctatcgctgtggacaacctcgccgac
gcagagtctctgaacacagacagcgacgataagaagaaaggtgatgaaaacgaggaaaat
gaagacgatgccaaggctggagaggaggacgagaaggacaatgcagaggaggatgaagac
gagccggacgttcctgcggggccccgcccacagatctcagagctcgttaagaaggagaaa
atcacaccaatcccagagggcagtgcgttcttcatcttcagcaacacaaacccagttcgt
gtcgcgtgccacaagctgataaaccaccacatcttcaccaatctcatcctcgttttcatt
atgttaagctccgcctccttggccgccgaggacccaatcagaaacttctctgcccggaat
atcatacttggttactttgactatgctttcacggctatctttactgtagagatcgtgtta
aaggtcctaggctatgcagattatgtcttcactagtatgtttacatttgagatcgtgttg
aagatgaccacgtatggcgcgtttctccacaagggggctttctgcaggaactacttcaat
cttctcgatctgctggtggtcggcgtgtcgctggtgtccttcggaattcaatcgtcggcc
atctcagtggtgaagattctgagggtcctgagggtgctgcgtccactcagggccataaac
agagctaaaggactgaagcatgtggtccagtgtgtgtttgtggccatcagaaccattgga
aacatcatgattgtcaccacactgctgcagttcatgtttgcctgcattggcgtacagctc
ttcaaggggaagttttatcgctgcaacgatgaaaccaagtccagcccggaggagtgcaag
ggaacatatatcctgtataaagaaggagacgtgaaccagccgatcattcagaagcgtcat
tggcacaacagcgatttcaactttgataacgtgctcatggccatgatggctctattcacg
gtgtccacgtttgaaggctggccggcgttgttgtacaaggccatagactccaaccgggag
aacctgggtcccatctacaattaccgtgtggagatttccatcttcttcatcatctacatc
atcatcatcgccttcttcatgatgaatatattcgtgggtttcgtcattgtgacctttcag
gaacagggagagaaagagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtg
gagtatgcgttaaaagcacgtcctctcaggaggtacatcccaaagaacccgtatcaatat
aagttctggtacgtggtgaactccaccggcttcgagtacatcatgtttgtcctgatttta
ctcaacaccatctgtctggccgttcagcactacggtcagtccgagctgttcaattacgtt
atggatatcctgaacatggtcttcactgccgtcttcactgtggagatggtactcaaactg
atcgccttcaagccccgacattatttcactgacgcgtggaacacgtttgacgccttaatt
gttgtcggtagcgtcgttgatatcgctatcactgaagtcaaccccacagaggcacctcag
gtggatgagtcggggaacactgaggacagcgctcgcatttcaatcaccttcttccgtctt
tttcgagtaatgcgattggtcaagctgctgagcagaggagaaggcattcgaacccttctc
tggaccttcatcaagtccttccaggctctgccatatgttgctttgctgatagccatgctg
ttcttcatctacgctgtcattggcatgcaggtgttcggaaaaattgccatggtggaccat
acacaaatcaacaggaacaacaactttcagacgttccctcaggcagtgcttctgctcttc
agatgtgcaacaggtgaagcctggcaggagatcatgttggcatgcatgcccggaaagctg
tgtgacccggagtcagactataatcctggagaagaaatgacctgcgggagcaacttcgcc
atcatctacttcatcaccttctacatgctctgcgccttcctgatcattaacctgtttgtg
gctgtcatcatggacaactttgactatttgacccgggactggtcgattctggggccgcat
catcttgatgaatttaagaggatttggtcagagtatgacccagaggccaaaggcagaata
aaacatcttgatgtagtgacgttgttgcgccgtattcagcctcctctcggcttcgggaaa
ctctgtcctcatagagtcgcctgcaagaggctggtggctatgaacatgcctctgaacagt
gacggcactgttatgtttaatgctacactttttgctcttgtgagaactgcactgaagatc
aaaacggaaggcaacctagagcaggcgaatgaagagctccgagctgtgatcaagaagatc
tggaagagaacaagcatgaaacttctggatcaagtggtgccccccgctggtgatgatgag
gtaacggtggggaagttctatgccactttcctgatacaggactactttaggaaattcaag
aaacgcaaagaggaaggcctggtgggcgttcacccagcacagaacaacaccgccatcgcc
ctgcaggctggccttcgtacgctgcatgacattgggccagaaatccgccgtgcaatatca
tgtgacctgcaggatgatgagctagtagactttataccagaggaggacgaagaaatttat
aggcgaaacggagggctctttggcaaccacatcaaccacataaatggagacccccggagg
agctccggccaccagacaaacgccacacagcgccccctgcaggtgcagccgcctccacat
tacgcccacatggaacagcccgtggggcgtctaggtcgcgccaatgccatggcgcagcaa
aaccaccatcgccaccaccaccaccatcatcaccatcatcatcatcacaactcctacaac
aagtcgcccaagtctaccaacatcaacctcaacaacgccaacgtgtctagcttaccaaac
ggaggacacagtcgttactatgagcacatgcctgctaacggttacccgggatcgtactac
ggagaatacgacaagcccaggaccccacacggacaaagaaggcgctactatgagacgtat
attaggtcgcaaggcagcgacaggagaagacccactatacgccgtgaagaggagtatgaa
gaagatcgttactctggagagtactacagcggagaggagttttatgaagatgacagcatg
ctgtcgggtgaaaggtaccccaacagcgaccaggaatatgagacgccacggggttaccat
catcctgacagttattatgaggatgacgagcagcccctttatcatgattcacgtaggtca
ccaaagagaagactgcttcctccgacaccgcaaggtaatcggaggccgtcgtttaatttt
gagtgtctacgcagacagagcagtcaagacgatcttcctcaccagcgcaccgctcttcca
ttacatctcatgcagcaccaggtgatggcggtagcgggtctagactcgagcagggctcac
aggctttcacctactcgatctaccagatcatgggcgtcacctcctcccactcctgcaagt
aaagaccataccccgtactacacgccgcttatccgcgtggaccgtcctctgagagacagc
gcccacagcagccactcatccatcaggaagagctcgtggtatacagacgaccccgagtac
cagaggaatttctcgcccgttcacctgcaggtcccacccgagtacagaaaccagtaccac
cagaagagaggcagcgctaccagcctggtcgaggcggtcttgatatcagaaggactgggt
cgctacgccaaggatccgaagttcgtggccgccacgaagcacgagattgcagacgcgtgc
gagatgactattgatgaaatggagagcgccgccagccatcttctgaacggcggaattacg
ccgggagtcaacggcgtcaacgtctttcccataatgggccccagagactacgagatgcag
gatgtctcggctagctacagcgatgaggaaccagaatccgaacccagaccgcagtacgag
gaggacctggcggacgaaatgatatgcattaccactttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system