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KEGG   Puntigrus tetrazona (Sumatra barb): 122355396
Entry
122355396         CDS       T08985                                 
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ptet04040]
    122355396 (scn4aa)
Ion channels [BR:ptet04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   122355396 (scn4aa)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C ATP-synt_B PKD_channel
Other DBs
NCBI-GeneID: 122355396
NCBI-ProteinID: XP_043109550
Position
12:508979..537774
AA seq 1829 aa
MASLLPPTGNYVFHRFTPESLVEIDRLIQERSTREDVEGVEEEPRAPSSDLEAGKCLPMI
YGDPPVDLLNTPLEDIDPFYKTQKTFIVISKGNTIYRFTAEPALFCVSPFSLVRRGAIKI
LIHSYFSMLIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATIKVLSRGFCIGPFT
FLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMIDVMILTLFALAVFALIGLQLFMGNLRHKCIRWPILNSTIFDDNSTMVNETTLNITD
TFDFKAYIDNEENQYFLEGSLDALLCGNSSDAGRCPEGFTCMKAGRNPNYGYTSYDNFGW
AFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYDEQN
EATLAEAREKEEEFQRLLEQLRNQEQEAGSKASLASQATQSRGSNRTGSLHSLGGDDVIK
DCNGRIVPRLIVNRASSNKELSAEEDHKSMSSKHSMQYLDQPKLSKRTASAISVLTATVE
ELEDAQRPCPPGWYKFADIFLKWDCCTSWIIFKKWVHFVVMDPFVDLGITICIVLNTLFM
AMEHYPMSPDFEHVLSVGNLVFTGIFTAEMVFKLIAMDPYYYFQVGWNIFDSIIVTLSLV
ELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFA
VVGMQLFGKSYKDCVCKISEDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGA
SMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRITRGINW
LKAFIGSILRQILVKKAPDNNEGGGEGDLELCAINHLDEGKMADGLVNCLPSTLTVPIAR
CESDVEEDEDSDDSSDEEDEKAALNNEDSSVCSTVDYRPPEPEPEPEEEEEPEPEEPESC
FTEGCVKRFTYLNVDITEGWGKRWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAFEDI
NIERRRVIKIILEYADKVFTYIFIVEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLT
ANLLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLI
FSIMGVNLFAGKFYHCINTTTEERIPMDVVNNKSDCMALMHTNEARWVNVKVNYDNVGLG
YLSLLQIATFKGWMDIMYAAVDSREVEEQPSYEINLYMYLYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKSKFGGKDIFMTEEQKKYYNAMKKLGSKKPAKPIPRPSNEIQGVVFDFITKQ
FFDIFIMVLICLNMVTMMIETDDQSVEKEDILYQINLFFIVIFTGECVLKMFALRHYFFT
IGWNVFDFVVVILSVAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLF
ALMMSLPALFNIGLLLFLIMFIFSIFAMSNFAYVKKQAGIDDIFNFETFGGSIICLFEIT
TSAGWDGLLLPIMNSGPPDCDPDMENPGTDIRGNCGNPGMGIMFFCSYIIMSFLVVVNMY
IAIILENFNVAQEESGDLLCEDDFEMFDETWEKFDADGTQFIEYSRLFDFVDALQEPLRI
AKPNRLKLITMDLPLVTDDKVHCLDVLLAVTREVLGDTIEMAAMKESIEAKFTMNNPTSA
SFEPITTTLRRKEEERAAIAVQRTYRRHLLKRAIRYACFMHRSKRKVRSQNDEEPPETEG
LIARKIDALYGSNPELAMALELQARPMPPNAQPPKPTSVTQHRVAVTYPRPQGQLILPVE
LMNEVILRSAPTTRGPCSSEIATIKESIV
NT seq 5490 nt   +upstreamnt  +downstreamnt
atggcaagcctgctccctcccacaggcaactatgtcttccaccgattcaccccagagtcg
ctggtggaaatcgacaggctcatccaggagaggagcaccagggaggatgtagagggggtt
gaggaggaaccacgggccccaagcagtgatttagaggcaggaaaatgcctgccaatgatc
tatggtgacccaccagtggatctcctcaacactcctctggaggacatagaccccttctat
aaaacacagaagacttttattgtcataagtaagggaaacacaatctacaggttcactgct
gaaccagcgctattttgtgtcagtccttttagcctcgtcagaagaggagccatcaaaatt
cttatacattcatattttagtatgctcatcatgatcaccatcctgtccaactgcgtgttc
atgacaatgagtaaccctccagcctggagtaaaactgtcgagtatgtatttactggtata
tatacctttgaagcaacaatcaaagttttgtctcgaggcttctgcatcggacctttcaca
ttcctccgtgatccatggaactggcttgatttcatggtgatcagcatggcgtacatcaca
gagtttgtagaccttggtaatgtgtcagcactgaggacatttcgtgtgcttcgagctctc
aaaacaatcacagttattcctggtttgaaaaccattgtcggggctttgattcagtctgtc
aagaagatgatagatgtcatgattttgactctttttgcactggctgtatttgccctcatt
ggcctgcagctgttcatgggaaatctgcggcacaagtgcatccgttggcccattctcaac
agcaccatctttgatgacaactccaccatggtcaatgagaccaccctcaacatcacagat
actttcgatttcaaagcatacatagacaatgaagaaaaccaatactttctggaaggaagt
ttagatgctttgttatgtggtaacagctctgatgctgggaggtgcccagaaggtttcaca
tgtatgaaggctggacgaaacccgaactatggctacaccagctatgacaactttggctgg
gcatttctcgcactcttcagactcatgactcaggactattgggagaatctctttcagttg
accctccgtgccgctgggaagacctacatgatcttctttgtggtgatcatattcctgggc
tctttctacctcatcaacctgattttggctgtggttgcgatggcatacgatgagcagaac
gaagccaccttggctgaagctcgtgagaaagaagaggaatttcaaagattacttgagcaa
ctcaggaaccaagagcaagaggcaggcagtaaagcatctttggccagccaggcgacacaa
agtcgagggtcaaacaggacaggttcgctgcacagtcttggcggtgatgacgttataaag
gactgtaacggccgaatagtgcctcgcctcattgtcaacagagcctcatctaacaaagag
ctatcagctgaagaagatcacaagtccatgagctccaaacacagcatgcagtacctggac
cagcccaaactctccaagagaacagctagtgctatcagtgtgctcactgcaactgtggag
gagttggaagatgctcagaggccttgtccccctggctggtataagtttgctgatattttc
cttaaatgggactgctgcacttcctggatcatatttaagaaatgggttcattttgtagta
atggacccatttgtggatttaggtatcaccatctgcattgtgctcaacacactttttatg
gccatggagcactaccccatgagtccggattttgaacatgtcctctcagtgggaaacctg
gtatttacaggaatcttcacagctgaaatggtgttcaagctcattgctatggacccctac
tactacttccaggtgggctggaacatttttgacagtatcattgtcacactcagcctggta
gagctgggactggccaatgtacaaggactgtctgttctcaggtcctttcgtttgctacgt
gtcttcaaactggctaaatcctggcccacccttaacatgctgatcaagatcatcggcaac
tcagtaggagccctggggaacctaacacttgtcctggccatcatcgtcttcatctttgcc
gtggtgggcatgcagctttttgggaagagttacaaggactgcgtttgtaagatttctgaa
gactgcgagctgccccgctggcacatgaatgacttcttccattctttcctcattgtcttt
cggatcttgtgtggagagtggattgagaccatgtgggactgcatggaggtggcaggagcg
agcatgtgcctgatagtcttcatgatggtcatggtcattggaaaccttgtggtactgaac
ctgttcctggctctgctgctcagctccttcagtggagataacctgtctggaggtgatgat
gatggtgagatgaacaaccttcagatcgccatcggtcgcatcaccaggggtataaattgg
ctcaaggccttcatcggcagtatattgcgccagattctagtaaagaaagctcctgacaat
aatgaaggaggaggggaaggagacctagaactgtgcgctataaaccacctggatgaggga
aaaatggcagatggcttggtcaactgtttgccttcaacactgactgtacctattgctcgt
tgtgagtctgatgttgaagaggacgaggactctgatgattcttctgatgaggaggatgaa
aaggccgctcttaataatgaagactcctcagtttgtagcacagtggactaccgacctcca
gaacctgagcctgagcctgaagaggaagaagaaccagagcctgaagaaccagagtcctgt
ttcacagagggttgtgtaaagcgatttacatatttgaatgtagacatcacagaaggatgg
gggaaaaggtggtggaaccttcgaagaacttgcttcaccatcgttgagcacgactacttt
gaaaccttcatcatctttatgatcctccttagtagtggagcactggcttttgaggatatt
aatattgagcgccgcagagtgatcaaaattatcctggagtatgctgataaagtctttaca
tacatcttcatagtggagatgttactaaagtgggtggcatatgggttcaagacttacttc
actaatgcatggtgctggctggacttcctcattgtggatgtgtcgctagtcagtttaaca
gctaatttattgggatattctgagctgggagcaatcaaatctctcagaacactcagggct
cttcgaccccttcgagccctgtcgagatttgaaggaatgagggtggtagtaaatgcattg
gttggtgccataccctctattttcaatgtgcttctggtgtgtctgatattctggctcatc
ttcagcattatgggagtcaatttgtttgctggaaagttctaccactgcatcaacaccacc
acagaagaacgcatccccatggatgtggtcaacaacaagagtgactgcatggctctgatg
cacaccaatgaggcgcgctgggtcaatgtgaaggtcaactatgacaatgtgggactcggc
tacctctctctactgcaaattgccacatttaaaggctggatggacatcatgtatgctgca
gtggattctagagaggttgaagagcagccatcatatgagatcaacctttacatgtacctg
tattttgttattttcatcatttttggatcctttttcactctcaacctcttcattggtgtc
atcattgacaacttcaatcagcagaagtccaagtttggagggaaagacattttcatgaca
gaggagcaaaaaaagtactacaatgccatgaagaagttgggttccaaaaaacctgcgaaa
cctatccctaggccatcgaatgagatccagggtgtggtgtttgacttcatcacaaaacag
ttctttgacatctttatcatggtgcttatctgtctcaatatggtgaccatgatgatagag
acagatgaccagagtgtggagaaagaggatattctgtaccagatcaatttgttcttcatc
gtcatcttcacaggagaatgcgtactgaagatgtttgcactcagacattactttttcact
attggctggaacgtctttgattttgttgtggtcatcctttctgtagcaggtctgatgtta
tcagacatcattgagaagtactttgtgtctcccactttgttccgtgtcatccggctcgcc
agaattggtcgcgtgctgcgtctcatcaaaggggcgaaaggcattaggactcttttgttt
gccttgatgatgtcacttcctgcccttttcaacatcggactgcttctgttcctcattatg
ttcatcttctccatctttgccatgtctaactttgcctatgtaaaaaaacaggcaggcatc
gatgatatcttcaactttgaaacatttggcggcagcatcatctgcctgtttgagatcaca
acctcggcaggatgggatggcctcctgctgcccattatgaacagtggccctccagactgt
gatcctgacatggagaaccctggtacagacattcggggtaactgtgggaatcctggcatg
ggtatcatgtttttctgcagttatatcatcatgtcattcctggtggtcgtgaacatgtac
attgctatcattcttgagaacttcaacgttgctcaagaggagagtggagacctgctttgt
gaggatgattttgagatgttcgacgagacatgggagaagtttgacgccgatggtacacag
ttcattgagtacagccgcttgtttgacttcgtcgatgccctgcaggagcctttgcgaatt
gccaaacccaaccgcctcaaactaatcaccatggatctaccccttgtaaccgatgacaaa
gtccactgtctggatgttctcttagcggttacccgtgaggttcttggcgacacgattgag
atggcggcaatgaaggaaagcattgaagccaagttcacaatgaacaatcccacatctgcc
tcctttgagccaatcaccaccactctcagaaggaaagaggaagagcgtgcagccattgcg
gttcaacgaacataccgtagacacctcctcaaacgtgctatccggtatgcgtgctttatg
catcgttcaaagaggaaagtcaggagtcaaaacgatgaagaacctcctgaaaccgaaggg
ttaattgcaaggaaaatcgatgccctatatggaagcaatccagaactcgccatggctctc
gagctgcaggctaggccaatgccacctaatgcacagccacccaagcccacctccgtcact
cagcacagagtagcagtaacctaccctcgaccacagggacaactcatacttccagtggag
ctcatgaatgaggtgatcctccggtctgcacccacgacgcgtggcccctgcagttcagag
attgcaacaattaaagagtcaattgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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