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KEGG   Puntigrus tetrazona (Sumatra barb): 122342785
Entry
122342785         CDS       T08985                                 
Symbol
ngs
Name
(RefSeq) notochord granular surface
  KO
K07610  desmin
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122342785 (ngs)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ptet04812]
    122342785 (ngs)
Cytoskeleton proteins [BR:ptet04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     122342785 (ngs)
SSDB
Motif
Pfam: Filament Filament_head GAS DUF677 DUF848 DUF3450 Cwp8_D3 Zw10_N Fib_alpha
Other DBs
NCBI-GeneID: 122342785
NCBI-ProteinID: XP_043092833
Position
4:1960862..1965535
AA seq 494 aa
MSHSPERMSSYRRHFEGGLTSSSTLQVRVSSPSPTRGAARHRSASYSRRALSGSRKSRMT
SSVSMGALCLGMGLGVAGGAVDLDAAAAENQAFLSTRTGERKEMVALNDRLAVYIEKVRS
LEQSNKLLEAEIDGIKSHHVKPSGLRLLYEEQLRELRRIADQMKVQRDLAVAAKDAMAGQ
LEMLKVKYEEAVEARKKAELEIEAFRPDVDAATSGRIALEKRLENLEVELEFLQRIHKKE
IEELMAQIYGSVAKVDVAFALPDLASALKQIQAQYDSIAAQNLQEMDAWYKAKFQDLNKA
TSRHVETARSLREEITAYKREIQNKQRELDALKNRNEALLLQMKEALERYKKEEEELQIR
IEAAKDELKSIKGKIALLLKDYQELLNVKMSLEIEITTYRKLIEGEDSRLSDMVSGLSLM
SVSAGAVNNVFGAAAAHRAALSSAVSEKMISSSTTVDHNHHESVEEFTHEQAVEMTERKT
VLIRYKYTTPKQYI
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgagtcacagcccagagaggatgtcttcttaccgccgtcacttcgagggtggcctgacc
tcgtcctccacgcttcaggtgcgggtctccagcccttcgcccacccgaggagccgcccgc
caccgctccgccagctactcccgcagggcgctctccgggtcccgcaaatcacgcatgacc
agcagtgtgagtatgggagcgctgtgtctgggcatgggtttgggggtagctggaggcgcg
gtggatctggacgctgcggccgctgagaaccaggctttcctcagcacacgcaccggcgag
agaaaggagatggtcgccctcaacgaccgcctggctgtatacatcgagaaggtgcgctct
ctggagcagagcaacaagctgctggaggcagaaatcgatggcatcaagagccaccacgtg
aagccgtccggtctgcgtctgctctatgaggagcagctgagggagctgaggaggattgct
gaccagatgaaagtccagcgggatctggcggtagcagcaaaggacgccatggcaggtcag
ctggaaatgctgaaggtgaaatacgaggaggccgtggaggccaggaaaaaggcagagctt
gaaattgaagccttcagaccggatgtggatgcggccacatccggccgcattgccttggaa
aaacgactggaaaacctggaagtggagcttgagttcctgcagaggattcacaaaaaggaa
atcgaggagctgatggctcagatttacggatctgtggctaaagtagatgtggccttcgct
ttgcctgatctggcatccgctctcaaacagatccaggctcaatatgacagtatcgccgcc
caaaacctgcaggagatggacgcttggtataaagcgaagtttcaagatcttaacaaagca
acatcacggcacgtggaaacagcgaggagcctcagagaagaaatcacagcttacaagaga
gagattcagaataaacagagagaactggatgctcttaaaaacaggaatgaagcactgctg
ctccagatgaaggaagcactggaacgatacaaaaaagaggaggaggagctacagatccgt
atcgaggctgcaaaggatgaactgaagtctattaaagggaagattgcacttctgctgaaa
gactatcaggaactgctcaacgtgaagatgtctctggagattgaaatcaccacatacagg
aagctgatagagggagaagacagtcgcttgtcagacatggtgagcggtctgtctctcatg
agcgtgagcgcaggagccgtcaacaatgttttcggggcggcagcagcccacagagcagcg
ctgagctccgccgtctctgagaagatgatctccagcagcacaacagtcgatcacaaccat
cacgagtctgtggaggagttcactcacgagcaggccgtagagatgacggagaggaagacc
gtcctcattaggtacaagtacaccactccaaaacaatacatctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (13)   

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