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KEGG   Labeo rohita (rohu): 127167968
Entry
127167968         CDS       T09007                                 
Symbol
cacnb2a
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2a isoform X1
  KO
K04863  voltage-dependent calcium channel beta-2
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04010  MAPK signaling pathway
lroh04260  Cardiac muscle contraction
lroh04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lroh04040]
    127167968 (cacnb2a)
Ion channels [BR:lroh04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   127167968 (cacnb2a)
SSDB
Motif
Pfam: Guanylate_kin VGCC_beta4Aa_N SH3_1
Other DBs
NCBI-GeneID: 127167968
NCBI-ProteinID: XP_050970363
Position
7:3575215..3612549
AA seq 623 aa
MKASWIRLLKRATGNRVKNNIGGSGDSYTSRPSDSDVSLEEDKETLRREAERQAQAQLEK
AKSKPVAFAVRTNVGYSASLEDDVPVPGMGISFEAKDFLHVKEKFNNDWWIGRLVKEGCD
IGFIPSPVKLESIRIHQEQRAKQGKFYSSKLGANSISSLGDVVSNSRKSTPPSSAVDIDA
AGLDPEESDPPPHQRSPKASPNTVISPLAREKRMPFFKKTEHVPPYDVVPSMRPVVLVGP
SLKGYEVTDMMQKALFDFLKHRFEGRISITRVAADISLAKRSVLNNPSKHAIIERSNTRS
NLAEVQSEIERIFELARTLQLVVLDADTINHPAQLGKTSLAPIIVYIKITSPKVLQRLIK
SRGKSQAKHLNVQMVAADKLAQCPSELFDIILDENQLEDACEHMADYLEAYWKSTHPPCV
PQTNPLLEKLTTVAAAAVACKDSLTNPQLKSRVGEQTAERPLDDRTGFYEDYHHHHHHYQ
TQKQGSLEDDNTEERDAKANNDQQSSEWRSRHKHHSHHHHHHHHRHHHHHHSRTTRTLSK
QETSESTYPEPLPGHTQEEEPPDHHHHHHHHHHHHRGDKEKEYDHNERNGRQRGKQRSQR
EPYQERDRKRGEAEWAREHYIEQ
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgaaggcctcctggatacgactgctgaaacgagcaacaggaaaccgagtcaagaacaac
attggtggttcaggggactcatatactagtcggccatctgactcggatgtgtctctggag
gaagataaagagaccttacgcagagaagctgagagacaagctcaggctcagctcgaaaag
gccaagtctaaaccagtggcatttgcagtacgtactaatgttggctacagtgcttctctt
gaagacgacgtccctgtgcccggaatgggaatctcatttgaggctaaagatttccttcac
gttaaagaaaaatttaataacgactggtggattggtcgattggtaaaagaagggtgtgac
atcggtttcatcccaagtccagtgaagcttgaaagcattcgcatccaccaggagcaacgt
gcaaaacaaggaaaattttactcgagtaaattaggggcaaactctatatctagtttagga
gacgtggtttcaaactcacgtaaatcaacccctccatcctcagctgtggatatagacgct
gcagggttagatccagaggagagcgaccctcctccccatcagcgttctcccaaagccagc
ccaaacacagtaatatcccctttagcccgtgagaaacgaatgcctttctttaagaagaca
gagcacgttcctccgtatgatgtggtgccgtctatgagaccggtggtgctggtgggaccg
tcgctcaagggctacgaggtgacagatatgatgcagaaagcgctgtttgactttctgaag
caccgctttgaggggaggatctcaatcacgagagtagctgctgatatttctctggccaag
cgctctgtgctcaacaaccccagtaaacatgccatcatcgaacgctcaaacacacgctcc
aatctagcggaggttcagagtgagatcgagaggatcttcgaactggctcgcacactgcag
ctggtggttcttgatgctgacacaataaaccatccggcccaactgggaaaaacatctctt
gcacctattattgtctacatcaagatcacttctccaaaggttttgcagcggttaataaag
tctagaggaaagtctcaggcaaaacatctcaatgtgcagatggtggcagcagacaaactg
gcccagtgcccttcagagctttttgacatcattcttgatgagaatcagctggaagatgcc
tgtgagcacatggctgattatctggaggcctactggaaatccactcatcctccctgcgtc
ccacagacaaaccctctgctggagaaactcaccacagtcgctgcagccgcagtcgcctgc
aaagactcactaactaatccacaactaaagagcagagtgggcgagcagacagcagagaga
ccgctggacgacaggacgggcttttacgaagactaccatcatcatcatcatcactaccaa
actcagaagcaaggaagtttggaagacgacaacactgaggagagagacgctaaagctaac
aacgaccaacaatcgagtgaatggagaagtcggcacaaacaccacagccatcatcatcac
catcatcatcaccgccaccatcaccaccatcacagtcgcaccacgcggacgctttccaaa
caagagacgtcagagtccacgtatcccgagcctctccccggacacacgcaggaagaggaa
ccgccagaccatcatcaccatcaccatcatcatcatcaccaccaccggggcgacaaagag
aaggaatacgaccacaacgagaggaacgggcggcaaagaggaaagcagaggtcacaacga
gaaccttatcaagagcgggacaggaaacgaggagaggcggaatgggcgagagagcattac
atagagcagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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