[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Larimichthys crocea (large yellow croaker): 104922748
Entry
104922748         CDS       T04659                                 
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03320  PPAR signaling pathway
lco04148  Efferocytosis
lco04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104922748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lco03000]
    104922748
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lco03310]
    104922748
Transcription factors [BR:lco03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    104922748
Nuclear receptors [BR:lco03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   104922748
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 104922748
NCBI-ProteinID: XP_027141998
Position
XIII:complement(18550271..18559227)
AA seq 441 aa
MSSQQPNNSSASNSPTNILGSPFSVISPSLNSPVVSPSLGFGPISSQISSSAGMHSISSS
EDIKPPFGLRPMPPHSPGLMLSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLS
YTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQEERQ
RNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQTAD
KQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIALKDGVLLASELQRD
SAHSTGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAK
GLSNTSEVELLREKVYASLEAYCKQRYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQLS
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgtcctcacagcagcctaacaacagttcagcgtctaacagtcccaccaacatcttgggt
tctcctttctcggtcatcagtccctcacttaactccccggtggtctcaccctctctggga
ttcggacccatcagcagtcagatctcttcttcagcagggatgcactcaatcagcagctca
gaagatatcaagcctccgtttggtctgaggcccatgccacctcacagccccggactaatg
ttgtctcagaagcgcttgtgtgtcatctgcggagaccgctcttctggcaagcattacggc
gtgtacagctgtgagggttgtaaagggttcttcaaacgaactgtgcgcaaagacctgagc
tatacctgcagggataacaaagagtgcctggtcgacaaacgccagcgcaatcgctgccag
tactgccgctaccagaagtgcctggccatgggcatgaagagagaagtgatcaaacatgta
aagtggataaaagaagatggaaaagatgagggatggatgacggtccaggaggagcgccag
aggaaccgagagcgcgaaggagagctggagttcagtgtcggcgtgaatgaggagatgccc
gtggagaagattttagaagcagagacggctgtggagcagaagactgagcttcactctgat
ggcggatctgcaggcaactctccccatgatgcggtcaccaacatctgtcagactgcagac
aaacagctgtttgccttggtggagtgggcaaagagaatcccccatttctctgaactgccc
cttgatgaccaagtcatccttcttcgtgcagggtggaatgaactcctcattgcctcattc
tcccatcgctccattgctttgaaggatggagttcttctggcctctgagctgcagcgcgac
agtgcacacagcacaggagttggagccatttttgacagggagagtgtgcagagtgcagag
gtcggcgccatatttgacagggtccttacagagcttgtcaataaaatgagagatatgcaa
atggacaaaacagagctgggctgcctccgagccatcgtcctcttcaacccagatgctaaa
gggctctccaacaccagtgaggtggagctccttagagaaaaggtctatgcatcattggaa
gcctactgcaaacagagatacccagagcagcagggaaggtttgctaagctccttcttcga
ctgccagcactgcgatccatcggcttgaagtgcttggagcatctcttcttctttaagttg
atcggtgacacgcctattgacactttcctcatggaaatgcttgaagctccccatcagttg
tcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system