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KEGG   Lates calcarifer (barramundi perch): 108891636
Entry
108891636         CDS       T04895                                 
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04010  MAPK signaling pathway
lcf04020  Calcium signaling pathway
lcf04218  Cellular senescence
lcf04260  Cardiac muscle contraction
lcf04261  Adrenergic signaling in cardiomyocytes
lcf04270  Vascular smooth muscle contraction
lcf04530  Tight junction
lcf04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108891636 (cacna1db)
Ion channels [BR:lcf04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   108891636 (cacna1db)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 108891636
NCBI-ProteinID: XP_050927093
UniProt: A0AAJ8B873
Position
LG6:complement(8835396..8919835)
AA seq 2283 aa
MVMSGKVSSEEVFLLNATPGHQNEFKQKGKEMFQRTLRRCLFGIFKGAQYASNRRTTPST
DASALWSESHTRLHQLHPPESLQAPASTGKPVGSSYGLLGASSGIQGAGGTGTGVSPVLA
WHAAISAARQAQGDTAKPDTGSRPSVCTTGPAPVGSLAQRKRQQYAKSKKQGGSTNSRPP
RALFCLTLNNPIRRACISLVEWKPFDIFILLSIFANCVALAIYIPFPGDDSNSTNQELET
VEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWNMLDFVIVIVGLFSVVLEMITKDADS
GGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVII
IYAIIGLELFIGKMHATCYVIKTGALAEEEPTPCAVSGHGRHCLLNGTVCREYWQGPNNG
ITNFDNFLFAMLTVFQCITMEGWTEVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLG
VLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGDEEGKRN
PSMPTSETESVNTDNHNGEEDKSPCCGPLCQKITKSKCSRQWRRWNRFCRRKCRAAVKSV
TFYWLVIILVFLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTLEMLVKMYSLGLQAYF
VSLFNRFDCFVVCGGIIETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASL
LNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILT
GEDWNTVMYDGIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNT
AQREEEEAKKRKNSAKEISTDKKRVEITEAKDGETKMPTEGLLEEDKELYPAIDSPVCDD
DDNDDLPEVPSGPRPQRLSELSIKEKTPPIPEGSAFFIFSSTNPFRVFCHKLINHQIFTN
LILVFIMLSSVSLAAEDPIRNFSARNIILGYADYVFTSMFTFEILIKMTAFGAFLHKGAF
CRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFV
AIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEECKGTYILYNNGDTALP
MVKERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENMGPIYNYRVEISI
FFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIP
KNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSQLFNNAMDILNMVFTGVFTV
EMILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQNYFADAWNTFDALIVVGSVVDI
AITEINSAAIPVVKVIVEPGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIK
SFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLMLFRCATG
EAWQEIMLACLPGKLCDSESDYNPGEERTCGSGFAIIYFISFYMLCAFLIINLFVAVIMD
NFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHR
VACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTS
MKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRRSWERLNTTMALQAG
LRTLHDIGPEIRRAISCDLQEEGLVDANAEEEEEIYRRNGGLFGNHINHVSGDQQGSSHP
TTVTQRPLQILPFSCSSSTEPTQTGRIASTNDREGETEMNSSPIQYNHHYHPPHPYNYPH
CNSTCHQSPIPSNANLNNANVPSLLSMTSGRQQKCLLRRDRPSSTKNGSSASTYSKGVHD
KPWRSHSTRTRYYEAYIRSESGGGLYPTIRREEPGGGDSDDERGSGEYYSGEEFHEDDIM
LTRDRLSNKNQCDAEGDFDPEVSRSDHQPESYYDDDQQLIYQDSRRSPRRWFLPSPQASN
RPTFSFECLRRRSSQDDAPPSPSCTALPLHLVQQQVMAVAGLDASRIHRLSPTRSLRSWA
TPPASPISLDCSPCYTPLIQVDWRSPGSVGSIPGAVKRSSWYTDGQDGSPSRSHSPSRLQ
LPAESCSHFLQKRGSANSLVEAVLISEGLGKYARDPKFVSVTKHEIADACEMTIDEMESA
ASNLLNGSMGNGSNGGSGSVSSDPHTSPHLRDHSIRDYSDEEPYVAVKCEEDLTDEMICI
TSL
NT seq 6852 nt   +upstreamnt  +downstreamnt
atggtcatgagtgggaaagtctcctctgaagaggttttcttgctcaatgccactccagga
caccaaaatgagttcaagcaaaagggaaaagagatgttccagagaacgctgaggaggtgt
ttgttcggcattttcaaaggggcacagtatgccagcaatagaaggaccacaccctccact
gacgcctcggcgctctggtcagaaagccacacccgtctgcaccagctccatccaccagag
tccctgcaggctccggccagcactggcaagcccgttggctcatcttatggcctccttggg
gccagtagcggcattcagggcgccggtggcactggtactggtgtcagcccagtcctcgct
tggcatgccgccatcagcgccgcccgccaagcacagggcgatactgcaaagcctgacacg
ggttcacggccctcagtttgcaccactggaccagctcctgtaggctcactggcacagagg
aagaggcagcagtatgccaagagcaaaaaacagggaggatccaccaacagcaggccaccc
agagctctgttctgcctcaccctcaacaacccgatccgcagggcctgcatcagcctggtg
gagtggaaaccatttgatatctttatactgctgtctatttttgccaactgtgtggcctta
gccatctacatacctttccctggagacgattccaattctaccaaccaagaactggaaaca
gtagaatatgccttcctgatcattttcactatagagacatttctgaagattattgcctac
ggcctggtcatgcaccaaaactcatacgtcagaaacggctggaacatgctggactttgta
atcgtcattgtggggttgttcagtgtggttctggagatgataaccaaagacgctgactct
gggggccagtctggaggcaaacctggggggtttgacgtcaaggccctccgagcctttcgc
gtactacgaccccttcgccttgtctctggagttcccagtttacaggtggttttaaactcc
attattaaagccatggttcccctgcttcacattgctctgctcgtcctcttcgtcattatc
atctacgccatcattggcctggaactcttcattggcaaaatgcacgccacatgctatgtg
ataaaaacaggtgcccttgcagaagaggagcccacaccgtgtgctgtatcagggcacggc
cgtcattgtctactcaatggcacagtttgcagagagtactggcaaggccccaacaacggc
atcaccaacttcgacaattttttgtttgctatgctcactgtgttccagtgcatcaccatg
gagggctggactgaggttctctactggatgaatgatgcaatgggctttgagctgccttgg
gtttactttgtcagtctggtcatctttggatccttttttgtactcaacttggttttgggt
gtgttgagcggagagttttccaaagaacgagagaaggccaaggctcgtggagacttccag
aagctacgtgagaaacagcagttagaggaagacctaaagggctacctggactggatcacc
caggccgaggacatcgaccctgagaacgaggaggagggagatgaggagggcaagcgtaac
ccgagcatgccgactagtgagacagagtcggtgaacacagataatcacaatggagaggaa
gacaaatctccctgctgcggacctctgtgtcaaaaaataactaagtcaaagtgcagtcgt
cagtggcggcggtggaaccgattttgccgcaggaagtgtcgtgcagctgtgaaatcagtg
acgttctattggctggtcatcatcttggtgtttctcaacactctcaccatcgcctctgaa
cactacaaccagccagactggctcactgaagtacaggacgtagccaacaaagttctcctg
gcaatgttcaccttggagatgctggtaaagatgtatagtttggggttgcaggcctacttt
gtgtccctgtttaaccgcttcgactgtttcgtggtgtgtggaggcatcatagagaccatc
ctggtggagctggccatcatgtctcccctgggcatctctgttttccgctgcgttcggctc
ctacggatcttcaaagttacacgtcattgggcatctcttagtaacttggtggcctctctg
ctcaactccatgaagtctatcgcctccctgttgctgctgctcttcctcttcatcattatt
ttctccctgctgggcatgcagctctttgggggcaagttcaactttgatgagactgtgacc
aagaggagcacgtttgataacttcccccaggccctgctcactgtgttccagatcttgaca
ggagaagactggaatacagtgatgtacgatggtatcatggcgtacggcgggccggcctcc
tctggaatggtggtctgcatttacttcatcatcctcttcatctgtggaaattacatcctg
ctaaatgtcttcttggccattgctgttgacaacctggcagacgcagagagcctcaacaca
gcacagagggaggaagaggaggccaagaagaggaagaacagtgccaaggaaataagtaca
gataagaagagagttgaaataacagaagccaaggatggcgagaccaagatgccaacagag
ggcttgctggaagaagacaaagagttgtatcctgccatcgactctccagtgtgtgatgac
gatgataatgatgacctcccagaagtcccctctggaccccgcccccagaggctgtctgaa
ctcagcatcaaagaaaagactccgcccatcccagagggcagcgccttcttcatcttcagc
agcactaacccgtttcgtgtattctgccacaagctgatcaaccatcagatctttaccaac
ctcatcctggtgttcatcatgctcagctctgtttctttggctgccgaggaccccatacgc
aacttctctgctcgcaatattatcctaggctatgcagactatgtcttcactagtatgttt
acatttgagatccttattaagatgacagcatttggagcgttcctccataaaggggcattc
tgtagaaactacttcaacctattagacctgctggtcgttggtgtgtctctggtgtccttt
ggcattcagtcctctgctatctctgtggtgaagattctccgtgtgttgagagtcctccgc
ccactcagggccatcaacagagcgaagggactcaagcacgtggtccagtgtgtgtttgtg
gccatcaggaccattggcaacatcatgatcgtcaccaccctgctgcagttcatgttcgct
tgtatcggcgtgcagctcttcaaggggaaattttatcgatgcacagatgacgcaaagtcc
agcccagaggagtgcaaaggtacatacattctttacaacaatggggacacagcactgccc
atggtgaaggagaggatctggtacaacagcgacttcaactttgacaacgtcctcatggcc
atgatggctctttttactgtctccaccttcgagggatggcccaccctgttgtataaggcc
atcgactccaacagagagaacatgggccccatctacaactaccgcgtcgagatctccatc
tttttcatcatctacatcatcatcatcgccttcttcatgatgaacatcttcgttggtttc
gttattgtcaccttccaggagcagggggagaaagagtacaagaattgcgaactggacaag
aaccagcgtcagtgtgtggaatatgctctcaaagctcgtcctctgcggcgctacatcccc
aaaaacccctaccagtacaagttctggtatgtggtcaactccactggttttgagtacgtc
atgtttgtcctgatcatcctcaacaccttgtgtctggccatacagcaccatggtcagtct
caactgttcaacaatgccatggacatcctcaacatggtcttcactggggttttcactgtg
gagatgatcctcaagctcatcgccttcaaacccagaggctatgtcggggacgcctggaat
gtcttcgatgctctggtggtgattggcagtgtagtcgacatcatactcagccagaactat
tttgctgatgcatggaacacgtttgatgccttaattgttgtgggtagcgtggttgacatt
gccatcactgagatcaattcggcagccattcctgtcgtcaaggtgatagtggagccaggg
aacactgaggacagcgctcgcatctccatcacattcttccgcctgttcagggtgatgcga
ttggtcaaactgcttagcaggggggagggcatcaggactctgctgtggaccttcatcaag
tccttccaggctcttccctatgttgcactcctgattgccatgttgttcttcatatatgct
gtaatcggaatgcaggtgtttgggaaaatagccatggtggatggaacacaaatcaaccgc
aacaacaactttcaaacctttcctcaagctgtcctgatgctcttcaggtgtgcgacaggt
gaggcctggcaggagatcatgctggcctgtctgccagggaagctgtgtgattcagagtct
gactacaaccctggagaagagagaacctgtggcagtggttttgccattatctacttcatc
agcttctacatgctctgtgcttttctgatcatcaacttatttgttgctgtcatcatggat
aactttgactatctgacccgtgattggtccattctggggcctcatcacctggatgagttt
aaaaggatctggtctgaatatgaccctgaagccaagggcaggatcaaacaccttgatgtg
gtgactctgctgaggaggatccagcctccactgggcttcggcaagctctgccctcacagg
gtggcctgtaagcgtcttgtggcaatgaacatgcccttgaacagtgacgggactgtcatg
tttaatgccactttgtttgctctggtccgcactgctctcaagattaagactgagggtaac
ctggagcaagccaatgaggagctcagagctgtaatcaagaagatatggaaaaggaccagc
atgaagctgctggaccaagtggtgccccctgcaggcgatgacgaggtaacagtggggaag
ttctatgccaccttcctgatacaggactacttcaggaagttcaagaggcgcaaagagcaa
ggtcttgtgggaaggcgctcatgggagaggctcaacaccaccatggctctacaagccggc
ctgcgcacgctgcatgacattggaccagagatccgtcgagccatatcatgtgacctgcag
gaagaagggctagtagatgctaatgcagaagaagaagaggaaatctacaggcgtaatggc
ggtttgtttgggaaccacatcaatcatgtcagtggcgatcagcaaggctcctcccacccg
accaccgtcacccaacgcccactacagatcctgcccttctcctgcagctcctcgactgag
cctacccaaactggcaggatagccagcaccaatgacagggaaggagagacagagatgaac
tcttcacccatccagtataatcaccattatcatcctcctcacccgtataattaccctcac
tgtaattccacctgccatcaatcgccaataccctctaatgccaacctcaacaatgccaac
gtgccctcgcttctctccatgaccagtgggaggcagcagaaatgtttgttaaggcgagac
cgcccgtcctccaccaaaaatggatcatcagcgtccacatacagcaaaggagtgcacgat
aagccttggaggtcacattccacaagaacacgctactatgaggcctacattaggtcagaa
agcggtggtggactttaccccaccattcgtcgagaggagccgggtggcggggacagtgat
gatgagcgaggctcaggagagtactacagcggagaggagtttcatgaagacgacatcatg
ctcacaagggacaggttgtctaacaagaaccaatgtgatgcagagggagactttgaccca
gaggtttctaggagcgaccaccagcctgagagttactatgatgatgatcaacagctgatc
taccaagacagcaggcggtcacccaggagatggtttttaccctcacctcaggcctctaac
agaccaacatttagttttgagtgtcttcgcagaagaagtagtcaggatgacgctccaccc
tctccatcctgtacagctcttcctctacacctggtgcagcaacaggtaatggcggtggcc
ggcctcgatgccagcagaattcaccgcctctctccaacgaggtcactgcgctcctgggcc
acacctcccgcttcacccatcagcctcgactgctcgccctgctacacaccgctcatacag
gtggactggcgcagtcccggcagcgttggcagcatccccggagcagtgaagaggagttca
tggtatacagatggccaggacggatctcccagccgcagccactctccgtcacgtctgcag
ttacctgcagagagctgctcacacttcctgcagaagagaggcagtgccaacagcctggtg
gaggctgtgttgatctctgagggtctggggaaatacgctagagaccccaagtttgtgtca
gtgaccaaacacgaaatcgcagacgcttgcgagatgaccattgacgagatggagagcgct
gccagtaacctcctgaatgggagtatgggtaatggtagcaatgggggttcagggagtgtc
agctcggacccacacaccagcccgcatcttagagaccacagtatccgtgactacagtgat
gaggagccgtacgtggccgtgaaatgtgaggaggacttaacagatgagatgatatgcatc
acatcactatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (78)   

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