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KEGG   Lates calcarifer (barramundi perch): 108873235
Entry
108873235         CDS       T04895                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108873235 (scn4ab)
Ion channels [BR:lcf04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   108873235 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH
Other DBs
NCBI-GeneID: 108873235
NCBI-ProteinID: XP_050924561
UniProt: A0AAJ8B264
Position
Unknown
AA seq 1778 aa
MAPLLPPVGSEVFRRFTPASLEEIQRRHEAEEKERQRRKEKNIEIAEEDLPKPASDLEAG
KPLPFIYGDPPPELLNTPLEELDPFYQSQKTFIVLSKGNIIYRFNAEPSCYLLSPFSCLR
NFSIRILIHSVFSLFIMVTILTNCVFMTMSDPPPWSKTVEYVFTAIYTFEATVKVLSRGF
CVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVLIPPLFGNHTSDVELNTGYH
GNNSLSNNTYGNNTGSFDYYEFINNPENYYFLPGQPDALLCGNSSDAGVCPEGFVCLKAG
RNPNYGYTSYDSFAWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLI
NLILAVVAMAYAEQNEATVAEAKQKEEEYAQIMEALKKREEEQAACRAALPEKPDSTLTS
EEGQEQEHTAMDDFEDDQRPCPPCWYAFADIFLKWNCCSCWQWIKQWLYTIVMDPFVDLG
ITICIVLNTVFMAMEHYPMTEDFEELLSVGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWN
IFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNL
TLVLAIIVFIFAVVGMQLFGKSYKDCVCRIAEDCELPRWHMNDFFHAFLIIFRVLCGEWI
ETMWDCMEVAGQAMCLIVFMMVLVIGNLVVLNLFLALLLSSFSGDNLAAPEEEGENNLQI
AINRINRAVAWIKSWILEHIWTVVGKKNHVNPDHIVVSSEEDNKKMKEVLPLTFVTSDQP
VSEVNAFSCSHGNLTSNYHNITFLRVPIAKAESEFESESESDFDTPEHEDEEENEDEEEE
KHSQCDESSACSTIQKLPEVKEEVDDEDLDSDAPEDCCTEKCYRRCPLLDINMSQGKGKV
WSNFRRTCFSIVEHNYFETFIIFMILLSSGALAFEDIYLEQRRVIKTVLEYADQVFTYIF
VVEMILKWIAYGFKTYFTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNKTSEE
MFHPDKVNNKTECLTLINDNFTEVRWKNLKVNYDNVGMGYLSLLQVATFKGWMDIMYAAV
DSREVESQPMYEDNLYMYLYFVCFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTE
EQKKYYNAMKKLGSKKPQKPVPRPENKFQGLVFDFVTKQFFDIFIMVLICLNMVTMMVET
DEQSQEKEIILYWVNLVFIIIFTTECTLKIIALRQHYFAVGWNIFDFVVVILSIVGLLLA
DIIEKYFVSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMF
IFSIFGMSNFAYVKKEGMMDDIFNFENFGNSMICLFMITTSAGWDGLLSPIMNTVPDCDP
DVENPGSPVRGNCGSPGVGIVFFTTYIIMSFLVVVNMYIAIILENFNVATEESSDPLCED
DFEMFYETWEKFDPDASQFIQYSKLSDFCDTLQDPLRIPKPNTIKLIHMDLPLVPGDKIH
CLDILLALTAEVLGDSGAMDTLKASMEEKFMANNPSKVSYEPISSTLRRKQEEVAATVIQ
RAYRKHLLRRTVKLASYKYREKTDRRRDVDLLPETEGLLYKRISQLYGNSQDTQEPDSGE
DPLLPPQVELQSEFVLHAAPPVNAPDFLQDENLRESIV
NT seq 5337 nt   +upstreamnt  +downstreamnt
atggcacctctgctgccccctgttggttcggaggtcttcagacgcttcacaccagcctca
ctggaggaaatccaacgacgacatgaagctgaagagaaagagcgacagaggaggaaggag
aagaacattgagatagcagaggaagatcttcccaaaccagccagtgacctggaggctggg
aagcccctcccattcatctacggagacccaccccctgagcttctcaacaccccattggag
gagctggatcccttctaccaatcacagaagaccttcattgtgctcagtaagggaaacatc
atctacaggtttaatgctgaaccttcctgttacctgctgagtccattcagttgtctgagg
aacttctctatcaggatcctcatccactctgttttcagtttgttcatcatggtgacgatt
ctgaccaactgtgtgttcatgacgatgagtgatcctcccccgtggagcaagactgtggag
tatgtgttcacagccatctacacgtttgaagcaacagtcaaagttctgtcccgaggattc
tgtgtcggagatttcaccttcctcagagacccctggaactggctggacttcatggtcatc
agcatggcatatctgacagagttcgttgacctgggaaatgtttctgcgttgaggacgttc
cgagttcttcgagccttgaaaaccatcacagtcatccccggtttaaagacaattgtcgga
gctctcatccaatcagtgaagaagcttgctgatgtcatgatcctgacggtcttctgtctc
agcgtctttgctctcattggtctgcagctcttcatgggaaacttgaggcagaagtgtgtc
ctgatcccgccactgttcggcaaccacacgtctgatgtcgaactcaacactggttaccat
ggcaacaacagcctcagcaacaacacctatggcaacaacacaggaagctttgattattac
gagttcatcaacaacccagagaactactacttcctgcccggtcagccggacgctctgctg
tgtggaaacagctctgatgctggggtctgtccagagggctttgtatgtctgaaggcggga
agaaatccaaactacggctacaccagttatgactcctttgcctgggcattcctggctctg
ttcagactgatgacccaggacttctgggaaaacctgttccagctgactttgcgagcagca
ggtaaaacctacatgatcttcttcgtggtcgtcatcttcctcggctcgttctacctcatt
aacctgatcctggctgtggtcgccatggcatacgcagagcagaacgaggccacggtggct
gaggccaaacagaaggaggaggagtacgctcaaatcatggaggcactgaagaagagagag
gaggagcaggcggcctgcagagcggcgctcccagagaaaccagactctacactcacatca
gaggaaggacaagagcaagaacacactgcaatggatgactttgaggacgaccagaggccg
tgtcctccatgttggtatgcctttgccgacatatttctgaagtggaactgttgcagctgc
tggcagtggatcaaacagtggctctacaccatcgtcatggacccatttgtcgacctcggc
atcaccatctgcatcgtcctcaacaccgtcttcatggccatggagcattatccaatgaca
gaggattttgaggagctgctgagcgtcggaaatctggtctttacagggatcttcacagct
gagatggtcctcaaacttctggccatggatccgtattactacttccaggtgggctggaac
atctttgacagcatcatcgtcaccatgagtctggtggagctgggattggctaatgttcag
ggcctgtctgtgctgcgctcattccgattgatgcgagtctttaagctggccaagtcatgg
ccaactctcaacatgctgatcaagatcatcgggaactctgttggggctctggggaacttg
actctggttctggccatcatcgtcttcatcttcgcagttgttgggatgcagttgtttggg
aagagttacaaagactgtgtctgtcgcattgcagaggactgcgaacttcctcgctggcac
atgaacgacttcttccacgccttcctcatcatcttcagggttctgtgtggagagtggatc
gagaccatgtgggactgcatggaggtcgcgggtcaggccatgtgtctgatcgtcttcatg
atggtcctggtcatcggaaacctggtggtcctgaatctgttcctggccttgttactgagc
tcgttcagtggtgataatctcgcagctccagaggaggaaggtgaaaataacttgcagatc
gccataaatcggatcaacagggctgtggcctggatcaaatcctggatcctagagcatatt
tggactgttgtggggaagaagaaccatgttaatccagaccacattgtggtcagcagtgaa
gaagacaacaagaagatgaaggaggttttgcctttgacctttgtgacctcagatcagccg
gtgtcagaggtcaatgccttcagctgtagccatggcaacctgaccagcaactaccacaac
atcactttcctgagggtccccatcgccaaggctgagtccgagttcgagtctgagtctgag
tccgactttgacacacctgaacatgaggatgaggaagagaatgaagatgaagaggaagaa
aagcactcccaatgtgacgaatcgtcagcctgcagcaccatacagaaacttcctgaggtc
aaggaggaagtagatgacgaagatctggattcagacgcacctgaagactgctgcactgag
aagtgttatcgtcgctgtccactcctggacatcaacatgtcccagggcaaagggaaggtc
tggtctaacttcaggagaacctgtttctccattgtagaacacaactactttgagaccttc
atcatcttcatgatcctgctcagcagtggagctctggcttttgaggacatctacctggag
cagcgtcgggtcataaagacagttctggagtacgcagaccaggtgttcacctatattttc
gtggtagagatgattctcaagtggatcgcctacggattcaagacctatttcaccaacgcc
tggtgttggctggacttcctcatcgtagacgtgtctctggtgtctctgacagcaaacatc
ctgggatactctgagctgggagccattaagtctctgaggaccctgagagctttgaggccc
ctgagggccctgtcccgcttcgagggcatgagggtggtggtgaacgctctggttggagca
atcccgtccatctttaatgtgctgctggtgtgtctgatcttctggctgatcttcagcatc
atgggagtgaacctgtttgcaggaaagttttattactgtttcaacaagacatcagaggag
atgttccaccctgacaaggtcaacaacaagaccgagtgcctcactctgatcaatgacaac
ttcaccgaggtccgctggaagaacctgaaggtcaactatgacaatgtgggaatgggctac
ctgtcgctgctgcaagtggccacatttaaaggctggatggatatcatgtatgctgcggtg
gactccagagaggtggagtctcagccgatgtacgaggataacctgtacatgtacctgtac
tttgtctgtttcatcatctttggctccttcttcaccctcaacctcttcatcggagtcatc
atcgacaatttcaaccagcagaaagccaagttgggaggaacagatattttcatgacagag
gagcagaagaaatattataatgccatgaagaaactgggctccaagaaacctcagaaacct
gttccacggcctgagaacaaattccagggtctggtctttgactttgtgaccaaacagttt
tttgacatcttcatcatggtgttgatctgcctcaacatggtgaccatgatggtggagacg
gatgagcagagccaggagaaagagattatcctatactgggtcaacctggtcttcatcatc
atcttcaccacagaatgcactctgaagatcattgcactcaggcagcactactttgctgtc
ggctggaacattttcgactttgtggtcgtcatcctgtccatcgtgggcctcctcctcgct
gacatcatagagaagtactttgtctcacccacgctctttcgtgtgatccgattggctcgt
attggtcgaattcttcgtcttattcgtggagctaaggggatccggacattgctgttcgcc
ctgatgatgtcacttcctgccctcttcaacattggcctcctcctcttcctcatcatgttc
atcttctccatcttcgggatgtcaaactttgcctacgtgaagaaggagggcatgatggac
gacatttttaactttgagaactttgggaacagcatgatctgtttgtttatgatcaccacg
tcagcaggatgggacggtctgctgagtcccatcatgaacactgtgccagactgcgatccg
gatgttgagaacccgggatcaccagtcagagggaactgtggtagcccgggggtgggcatc
gtcttcttcaccacctacatcatcatgtccttcttggtggtggtcaacatgtacatcgcc
atcatcctggagaacttcaatgtggccacagaggagagcagtgacccactgtgtgaggac
gactttgagatgttttatgaaacctgggagaagtttgaccctgatgcctcacagtttata
cagtacagtaagctgtcagatttctgtgacactctacaggatcctctaagaattcccaaa
cccaatactatcaaactgatccacatggatctgcctctggttcctggagacaagatccac
tgtcttgacatcctgcttgcactcactgcagaggtgttgggtgattcaggagcaatggac
actctgaaagccagcatggaggagaaattcatggcaaacaacccctcaaaggtgtcgtat
gaaccgatcagcagcaccctgcggaggaaacaggaggaggtggcagcaactgtgatccag
cgggcgtacaggaaacatctcctgcggcgaacagtcaaactggcatcctacaaataccgt
gagaagacagacagacggcgagacgtggatttgctgccagagacagagggacttctctat
aaaagaatcagtcagctgtatggaaacagccaggacacacaggaaccagattctggtgag
gacccacttcttccaccccaagtagagcttcagagtgagtttgtcctccatgctgctcca
cccgtcaacgctcctgacttcctgcaagatgagaacctgagggagtctatcgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (70)   

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