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KEGG   Lemur catta (Ring-tailed lemur): 123645800
Entry
123645800         CDS       T08326                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat03320  PPAR signaling pathway
lcat04148  Efferocytosis
lcat04151  PI3K-Akt signaling pathway
lcat04659  Th17 cell differentiation
lcat04919  Thyroid hormone signaling pathway
lcat04920  Adipocytokine signaling pathway
lcat04928  Parathyroid hormone synthesis, secretion and action
lcat04932  Non-alcoholic fatty liver disease
lcat04976  Bile secretion
lcat05160  Hepatitis C
lcat05200  Pathways in cancer
lcat05202  Transcriptional misregulation in cancer
lcat05207  Chemical carcinogenesis - receptor activation
lcat05216  Thyroid cancer
lcat05222  Small cell lung cancer
lcat05223  Non-small cell lung cancer
lcat05226  Gastric cancer
lcat05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    123645800 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    123645800 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    123645800 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    123645800 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    123645800 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    123645800 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123645800 (RXRA)
   05202 Transcriptional misregulation in cancer
    123645800 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    123645800 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    123645800 (RXRA)
   05216 Thyroid cancer
    123645800 (RXRA)
   05222 Small cell lung cancer
    123645800 (RXRA)
   05223 Non-small cell lung cancer
    123645800 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    123645800 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    123645800 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    123645800 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcat03000]
    123645800 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:lcat03310]
    123645800 (RXRA)
Transcription factors [BR:lcat03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    123645800 (RXRA)
Nuclear receptors [BR:lcat03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   123645800 (RXRA)
SSDB
Motif
Pfam: zf-C4 Nuc_recep-AF1 Hormone_recep tRNA_bind_3
Other DBs
NCBI-GeneID: 123645800
NCBI-ProteinID: XP_045418240
Position
10:2846790..2947368
AA seq 513 aa
MSGSAAMDTKHFLPLDFSTQVNSSSLNSPPGRGSMAAPSLHPALGPGIGSSLGSPGQLHS
PISTLSSPINGMGPPFSVISSPMGHSMSVPTTPTLGFGTGSPQLSSPMNPASSSEDVKPP
LGLNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYT
CRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERSESEVESTSSASEDM
PVEKILEAELAVEPKTGACVEANTGLHPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
ELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGGADGARVQD
AGHADGQDGAGLPASHRPLQPRLQGTLEPGRGGGPEGEGVRIPGGLLQAQVPRAAGEVRQ
APAPPACSALHWAQVPGTSLLLQAHRGHAHRHLPHGDARSPAPDDLGLPARPSARRVWPP
CLDASCSSQPEPCPHPSLPGLCGPSGAACHCSA
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgagtgggtcggcggccatggacaccaagcacttcctgccgctcgacttctccacccag
gtgaactcctcgtccctcaactccccgccgggaagaggctccatggctgccccctccttg
caccccgccctgggacctggcatcggctcctcgctgggctccccggggcagctgcactcg
cccatcagcaccctgagctcgcccatcaacggcatgggcccgcccttctcggtcatcagc
tcccccatgggccactccatgtcagtgcccaccacgcccaccctgggcttcggcacgggc
agcccccagctcagctcgcccatgaaccctgccagcagcagtgaggatgtcaagcccccc
ctgggcctcaatggcgtcctcaaggtccccgcccacccctcaggaaacatggcgtccttc
accaagcacatctgcgccatctgcggggaccgctcctcaggcaagcactacggggtgtac
agctgcgagggctgcaagggcttcttcaagcggaccgtgcgcaaggacctgacctacacc
tgccgcgacaacaaggactgcttgattgacaagcgacagcggaaccggtgccagtactgc
cgctaccagaagtgcctggccatgggcatgaagcgggaagccgtgcaggaggagcggcag
cgcggcaaggagcggagcgagagcgaggtggagtccacgagcagcgccagcgaggacatg
ccggtggagaagatcctggaggcggagctggccgtggagcccaagaccggggcctgcgtg
gaggcgaacacggggctgcaccccagctcgcccaacgaccccgtcaccaacatctgccag
gcggccgacaagcagctcttcaccctcgtggagtgggccaagcgcatcccgcacttctcg
gagctgcccctggacgaccaggtcatccttctgcgggccggctggaacgagctgctcatc
gcctccttctcgcaccggtccatagccgtgaaggacgggatcctgctcgccaccgggctg
cacgtgcacaggaacagcgcccacagcgcagggggtgctgacggagctcgtgtccaagat
gcgggacatgcagatggacaagacggagctgggctgcctgcgagccatcgtcctcttcaa
ccccgactccaagggactctcgaacccggccgaggtggaggccctgagggagaaggtgta
cgcatccctggaggcctactgcaagcacaagtaccccgagcagccggggaggttcgccaa
gctcctgctccgcctgcctgctctgcgctccattgggctcaagtgcctggaacatctctt
cttcttcaagctcatcggggacacgcccatcgacaccttcctcatggagatgctagaagc
cccgcaccagatgacctaggcctgccggcccgtccctccgcccgccgggtctggccgccc
tgcctggacgccagctgctcttctcagcctgagccctgtccccacccttctctgcctggc
ctgtgtggaccttcgggtgcagcctgtcactgctctgcctga

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