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KEGG   Lemur catta (Ring-tailed lemur): 123620520
Entry
123620520         CDS       T08326                                 
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
lcat  Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcat04040]
    123620520 (SCN4A)
Ion channels [BR:lcat04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   123620520 (SCN4A)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH Lustrin_cystein
Other DBs
NCBI-GeneID: 123620520
NCBI-ProteinID: XP_045381770
Position
15:complement(44178643..44222433)
AA seq 1825 aa
MARPSLATVVPLGPECLRPFTRESLVAIEQRAAEEVARKERNKQMEIEEAERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYLLSPFSLV
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRHKCVRWPPPFNDTNTTWYGNDTW
YSNDTWYSNDTWYGNDSWASNYTFDWDAYISDEGNFYFLEGSNDALLCGNSSDAGHCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAKAAQALE
GGEADGDPAHGCNGSLDASPGEKGAPRPSGSADSAISDAMEELEEAHQKCPPWWYKCAHK
LLIWNCCIPWVKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDNVLTVGN
LVFTGIFTAEMVLKLIAMDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIA
SDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPLCLTVFLMVMVIGNLVVL
NLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKLLSPRDI
MLSLGKPGDAEEAGEAGESAPEDEKKELPPEEDLKKDNHILNHVGLVDGPPSSIELDHLN
FINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDSKKPLQPLYDGNSSVCSTADYKPP
EEDPEEQAEENPEGEEPEECFTEACVQRYPCLYVDISQGRGKKWWTLRRACFKIVEHNWF
ETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLLKWVAYGFKVYF
TNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNAL
LGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNNKSECESLM
HTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREQEEQPQYEVNIYMYL
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVFI
IVFTGECVLKMFALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLA
RIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGI
DDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVKGDCGNPSI
GICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQ
FIAYSLLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGE
MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSVKQASYM
YRHSQDGNGDGAPEKEGLIASTMNKMYGRENGNGNRSVHSEGDKGLAGDAVPALGLTPVS
PSDAALPPSPPPGQTVRPGVKESLV
NT seq 5478 nt   +upstreamnt  +downstreamnt
atggccagaccgtctctggcaaccgtggtccctctgggccccgaatgcctgcgccccttc
acccgggagtccctggtggccatagagcagcgggcggcggaggaggtggcgcggaaggag
cggaacaagcagatggagattgaggaggctgaacggaagccgcgcagcgacctggaggcc
ggcaagaacctgccccttatctatggggaccccccaccggaggtcatcggcatccccctg
gaggacctggacccctactacagcgacaagaagaccttcatcgttctcaacaagggcaag
gccatcttccgcttctctgccacgcctgccctctacctgctgagccccttcagcctcgtc
aggcgcggtgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtgacccgcctccctggtccaaggacgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatgctggcccgaggc
ttctgcatcgatgacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgaggacc
ttccgggtgctgcgggctctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcactgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatggggaacctgcggcacaagtgt
gtgcgctggccaccgcccttcaacgacaccaacaccacatggtacggcaacgacacgtgg
tacagcaatgacacgtggtacagcaatgacacgtggtacggcaacgacagctgggccagc
aactacacctttgactgggacgcctacatcagtgacgaagggaacttctacttcctggag
ggctccaacgatgccctgctctgtgggaacagcagtgacgctgggcactgccccgagggt
tatgagtgcatcaaggccgggcggaatcccaactatggctacaccagctacgataccttc
agctgggccttcctggctctcttccgcctcatgacacaggactattgggagaacctcttc
cagctgacccttcgagcagccggcaagacctacatgatcttcttcgtggtcatcattttc
ctgggctccttctacctcatcaatctgatcctggccgtggtggccatggcctacgccgag
cagaacgaggccaccctggcggaggatcaggagaaagaggaggagtttcagcagatgctc
gagaaattcaagaagcaccaggaggagctggagaaggccaaggccgcccaggctctggaa
ggtggggaggcagatggggacccagcccatggctgcaatggcagcctggacgcatcgcct
ggggagaagggagccccgaggccgagcggcagtgcagacagcgccatctcggatgctatg
gaagagctggaagaggcccaccagaagtgcccaccatggtggtacaagtgtgcccacaaa
ctgctcatatggaactgttgcattccatgggtgaagttcaagaacatcgtccacctgatt
gtcatggaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctcttc
atggccatggaacattatcccatgacagagcagtttgacaacgtgctcactgtgggcaac
ctggtcttcacaggcatcttcacagcagagatggtgctgaagctgatcgccatggacccc
tacgagtacttccagcagggctggaacgtcttcgacagtatcatcgtcaccctcagcctg
gtggagctgggcctggccaacgtgcaggggctgtccgtgctccgctccttccgtctgctg
cgggtcttcaagctggccaagtcgtggccgacgctgaacatgctcatcaagatcattggc
aactcggtgggggcgctgggcaacctgacgctggtgctggccatcatcgtgttcatcttc
gcggtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaagatcgcc
tccgactgcagcctgccgcgctggcacatgcacgatttcttccactccttcctcatcgtc
ttccgcatcctgtgtggggagtggatcgagaccatgtgggactgcatggaggtggccggc
cagcccttgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctggtggtcctg
aacctgttcctggctctgctgctgagctccttcagcgctgacagcctggcggcctcggac
gaggacggcgagatgaacaacctgcagatcgccatcgggcgcatcaagtggggcatcggc
ttcgccaaggccttcctgctgggcttgctgcacggcaagctcctgagccccagggacata
atgctcagcctcgggaagcccggggacgccgaggaggccggagaggccggggagagcgcc
cccgaggacgagaagaaggagctgccacctgaggaggacctgaagaaggacaatcacatc
ctgaaccacgtgggcctggtggacggccctccctccagcatcgagctggaccacctcaac
ttcatcaacaacccctacctgaccatacaggtgcctatcgcctccgaggagtccgacctg
gagatgcccacggaggaggaaaccgacactttctcggagcctgaggacagcaagaagccg
ctgcagcccctctacgatggcaactcctccgtctgcagcacggcggactacaagcccccc
gaggaggaccctgaggagcaggcagaggagaaccccgagggggaggagcccgaggagtgc
ttcactgaggcctgtgtgcagcgctacccctgcctctacgtggacatctcccagggccgc
gggaagaagtggtggaccctgcgcagggcctgcttcaagatcgtcgagcacaactggttc
gagaccttcattgtcttcatgatcctgctcagcagtggggccctggccttcgaggacatc
tacatcgagcagcggcgagtcatccgcaccatcctagagtacgccgacaaggtcttcacc
tacatcttcatcctggagatgctgctcaagtgggtggcctacggcttcaaggtgtacttc
accaacgcctggtgctggctcgacttcctcatcgtggacgtctccatcatcagcctggtg
gccaactggctgggctactcggagctgggacccatcaaatccctgcggacacttcgggcc
ctgcggcccctgagggcgctgtcccgattcgagggcatgagggtggtggtgaacgccctc
ctgggcgccatcccctccatcatgaacgtgctgctcgtctgcctcatcttctggctcatc
ttcagcatcatgggtgtgaacttgtttgccggcaagttctactactgcatgaacaccacc
acctccgagcggtttgacatctccgaggtcaacaacaagtccgagtgcgagagcctcatg
cacacgggccaggtccgctggctcaacgtcaaggtcaactatgacaacgtgggtctgggc
tacctctccctcctgcaggtggccacgttcaagggttggatggacatcatgtatgcagcc
gtggactcgcgggagcaggaggagcagccacagtatgaggtgaatatctacatgtacctc
tacttcgtcatcttcatcatcttcggatccttcttcaccctcaacctcttcatcggcgtc
atcattgacaacttcaaccagcagaagaagaagtttggagggaaagacatcttcatgaca
gaggaacagaagaaatactataacgccatgaagaagcttggctccaagaagccgcagaag
ccaattccccggccccagaacaagatccagggcatggtgtatgacttcgtgacgaagcag
gtgtttgacatcaccatcatgatcctcatctgcctcaacatggtcaccatgatggtagag
acggacgaccagagccagctcaaggtggacatcttgtacaacatcaacatggtcttcatc
atcgtcttcacgggcgagtgtgtgctcaagatgttcgccctgcggcagtactacttcacc
gtcggctggaacatcttcgactttgtggttgtcatcttgtccattgtgggcctcgcgctc
tccgacctgatccagaaatacttcgtgtcgcccacgctgttccgtgtgatccgcctggcg
cggattgggcgtgtcctgcggctgatccgcggggccaagggcatccggacgctgctgttt
gccctcatgatgtcgctgcctgccctcttcaacatcggcctcctcctcttcctggtcatg
ttcatctactccatcttcggcatgtccaactttgcctacgtcaagaaggagtcgggcatc
gatgacatgttcaactttgagacctttggcaacagcatcatctgcctcttcgagatcacc
acgtcagccggctgggacgggctcctcaaccccatcctcaacagcgggccccccgactgt
gaccccaccctggagaacccaggcaccagcgtcaagggggactgcggcaacccctccatc
ggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtggtcaacatgtac
attgccatcatcctggagaacttcaacgtggccaccgaggagagcagtgagcccctgggc
gaggacgacttcgagatgttctatgagacgtgggagaagttcgaccccgacgccacccag
ttcatcgcctacagcctcctctctgacttcgtggacaccctgcaggagccgctgaggatc
gccaagcccaacaagatcaagctcatcacactggacctgcccatggtgccgggggacaag
atccactgcctggacatcctcttcgccctgaccaaagaggtcctgggtgactctggggaa
atggacgccctcaagcagaccatggaggagaagttcatggcggccaacccctccaaggtc
tcctacgagcccatcaccaccaccctgaagaggaagcaggaggaggtgtgcgccatcaag
atccagagggcctaccgccggcacctgctgcagcgctctgtgaagcaggcgtcctacatg
taccgccacagccaggacggcaatggtgacggggcccctgagaaggaggggctgatcgcc
agcactatgaacaagatgtatggccgtgagaacgggaacgggaacagaagtgtgcacagc
gagggggacaagggcttggctggggacgctgtacctgccttggggctcacgccggtcagc
ccctcagatgccgccctgcctccgtccccaccaccggggcagacggtgcgcccaggggtc
aaggagtctcttgtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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