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KEGG   Ixodes scapularis (black-legged tick): 8051436
Entry
8051436           CDS       T01131                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-B isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:isc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    8051436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:isc03000]
    8051436
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:isc03310]
    8051436
Transcription factors [BR:isc03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    8051436
Nuclear receptors [BR:isc03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   8051436
SSDB
Motif
Pfam: Hormone_recep zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 8051436
NCBI-ProteinID: XP_002435070
UniProt: B7PMS2
Position
Unknown
AA seq 431 aa
MYKKERPKLSVTALLYGSGVGPPSPSPWGAPPGAAAPSAGLNGSPSSNGVSSSLAQPSFL
LGGYGGGGGGGAPSSVSQRGDPRALVDPGPAFAQGGSSRYPPNHPLSGSKHLCSICGDRA
SGKHYGVYSCEGCKGFFKRTVRKDLTYACREERNCIIDKRQRNRCQYCRYQKCLSCGMKR
EAVQEERQRTKDRADNEVESTSGGAPAEMPLERILEAELRVEPKGGSAPESQDPVSSICQ
AADRQLHQLVEWAKHIPHFVELPLEDRMVLLKAGWNELLIAAFSHRSIGVRDGIVLATGL
VVQRHSAHGAGVGAIFDRVLTELVAKMREMKMDRTELGCLRAVVLFNPEAKGLRSTAQVE
ALREKVYAALEEHCRQQYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDNF
LLSMLEAPSDA
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacaagaaggagcgacccaagctgtccgtgaccgcgctgctgtacgggtcgggcgtc
ggaccgccgtcgccgtcgccctggggcgcgccgccgggcgccgccgcgccctcggcgggc
ctcaacggcagtccctcgtccaacggcgtgagcagcagcctcgcccagccgtccttcctg
ctgggcggctacggcggcggcggtggcggcggggccccgagctcggtgagccagcgcggc
gatccgcgggccctggttgacccggggcccgcattcgcgcagggcggctcttcgcgctac
ccgcccaaccatcccctcagtgggtccaaacacctctgctccatctgtggcgacagggcg
tcggggaagcactacggcgtgtacagttgcgagggctgcaagggcttcttcaagcggacg
gtgcgcaaggacctgacgtacgcgtgccgggaggagcgcaactgcatcatagacaagcgg
cagcgcaaccggtgccagtactgtcggtaccagaaatgcctgtcgtgcggcatgaagcgg
gaggcggtgcaggaggagcggcagcgcaccaaggaccgggccgacaacgaggtggagagc
acgagtggcggcgccccggcggagatgccgctggagcgcatcctagaggcggagctgcgg
gtggagcccaaggggggctctgctccagagtcccaggaccctgtgagcagcatctgccag
gcggccgaccgccagctgcaccagctggtcgagtgggccaagcacatccctcactttgtg
gagctgcccctggaggaccgcatggtgcttctcaaggctggctggaacgagctgctcatt
gcggccttctcgcaccgctccattggcgtgcgggacggcattgtgctcgccacgggcctg
gtggtgcagcgccacagtgcccacggggcaggcgtgggcgccatctttgacagggtgctc
accgagcttgtggccaagatgcgcgagatgaagatggaccgcacggagctgggctgtctc
cgggccgtcgtgctctttaacccggaggccaaaggcctgcgcagcactgcccaggtggag
gccctcagggagaaggtttatgcggcgctggaggagcactgccggcagcagtacccagag
cagccgggccgctttgccaagctgctgctgcggctgcctgcactgcgcagcatcggcctc
aagtgcctcgagcacctgttcttcttcaagctcattggggacacccccatcgacaacttc
ctcctctccatgctcgaggccccctcggatgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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