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KEGG   Ictalurus punctatus (channel catfish): 108273275
Entry
108273275         CDS       T04658                                 
Symbol
desmb
Name
(RefSeq) desmin b
  KO
K07610  desmin
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108273275 (desmb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108273275 (desmb)
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     108273275 (desmb)
SSDB
Motif
Pfam: Filament Filament_head DUF7491 TolA_bind_tri CCDC92 KH_PARP14_8 Baculo_PEP_C
Other DBs
NCBI-GeneID: 108273275
NCBI-ProteinID: XP_017337923
Ensembl: ENSIPUG00000013039
UniProt: A0A2D0S593
Position
12:8634581..8641659
AA seq 472 aa
MSRASYASSQSSSYRRAFGGPGFTTTPITRSSMLGRSPGGSHVSSRVYEVTKTASSSPGY
TSYRASSYGIPAHSAGISRSYAAGLGETLDFSLADALNQEFLQTRTNEKVELQHLNDRFA
SYIEKVRFLEQQNQALTVEVERLRGREPTRVADLYEEEMRELRRQIEVVTNQRSRVEVER
DNLVDDLQKLKLRLQEEIEQREEAENNLAAFRADVDAATLARLDLERRIETLQEEIAFLK
KIHEEEIRELQAQMQETQVQIQMDMSKPDLTGALRDIRSQYEAIAAKNIAEAEDWYKSKV
SDLNQAVSKNNEALKQAKLETMEYRHQIQSYTCEVDSLKGTNESLMRQMHDMEDRHGREA
AGFQDTIARLEAEISNMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLPM
QAYSTISFRETSPEHQQRASEMHSKKTVLIKTIETRDGEVVSESTQHQQDIM
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgagccgcgcctcttacgcctcctctcagtcctcctcataccgccgtgccttcggcggg
cccggcttcaccacaacccccattacccgctcctcaatgcttggccgtagccccggaggc
tcacatgtcagctcacgggtctacgaggtcaccaagacggcttcatcatcaccaggctat
accagctaccgcgcgtcttcctatggcatccctgctcattcagcaggcatctcccgctcc
tatgccgccggcttgggtgagacactggacttcagcttggccgatgccctcaaccaggag
ttcctccagacgcgcaccaacgagaaggttgagctgcagcacctgaacgaccgcttcgcc
agctacatcgagaaggtgcgctttctcgagcagcagaaccaggctctgactgtagaagtg
gagcgactgcggggccgagagccaacgcgtgtcgctgacctctatgaagaggagatgagg
gagctgaggcgccagatagaggttgtgaccaatcagaggtcccgagttgaagtggagcgg
gacaacctggttgatgacttgcagaaactcaaactcaggcttcaggaggagattgaacag
agagaggaggccgagaacaaccttgcagcattcagagctgatgtggatgcagccaccctc
gcacgcttggacctggagagacgcatcgaaactctgcaagaggaaatcgccttcctcaag
aagatccacgaggaggagatccgtgagctgcaggctcagatgcaagagactcaggtgcag
atccagatggacatgtccaagcctgatctgactggtgctctgagagacatccgttctcag
tacgaggccatcgccgccaagaacattgctgaggccgaagactggtacaagtccaaggtg
tcagatctgaaccaagcagtatccaagaacaacgaagccctgaagcaggccaagctggag
accatggagtaccgacaccagattcagtcctacacctgtgaggttgactcactgaagggc
acgaacgagtctctgatgaggcagatgcatgacatggaggaccgacatggacgcgaggct
gccggcttccaggacacaattgcccggctggaggctgagatctctaacatgaaggatgag
atggcgcgacacctgcgcgagtaccaggacctgctcaatgtcaagatggccctcgatgtg
gagatcgccacctacaggaagctgctggagggagaagagagcaggattacactgcccatg
caggcctactccacgattagttttagagagaccagcccagagcaccaacaacgagcttct
gaaatgcactcaaagaaaacagtgctcatcaagacgatcgagacccgtgatggcgaggtg
gtgagtgagtccacacagcaccagcaggacatcatgtag

  All links  
Gene (13)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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