[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Ictalurus punctatus (channel catfish): 100304598
Entry
100304598         CDS       T04658                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ipu04040]
    100304598 (scn4ab)
Ion channels [BR:ipu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100304598 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel IQ_SCN5A_C GPHH FUT8_N_cat DUF7582 Zip FtsH_ext
Other DBs
NCBI-GeneID: 100304598
NCBI-ProteinID: XP_053540017
Ensembl: ENSIPUG00000018903
UniProt: A0A9F7TNM8
Position
12:complement(29074798..29129831)
AA seq 1795 aa
MAKKRKISLLEAWVRNRAAQPKKAEKPKLWPQQSALLRDPELVSSLVQQNVKMACLLLPA
GTDVFRRFTPESLAECERLKAEADAEEAQRKAQNIEILEEDLPKPSKDLEVGKSLPFIYG
DPPPELLNIPLEELDPYYKSKKTFIVISKGNTINRFNVDPACYVLTPFNPIRRVAIRVLI
HSLFSMFIMVTILSNCVFMTMSNPPEWSKIMEYVFTGIYTFEALIKVLSRGFCIGDFTFL
RDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK
LGDVMILTVFCLSVFALIGLQLFMGILRNKCIQWPPASMNDTMDTNSTFDFEQYFDNNEN
YYHLDGSLDPLLCGNSSDAGRCPEGYVCMKAGRNPNYGYTSYDSFGWAFLALFRLMTQDF
WENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEANMAEAKEKEEE
YAKIMEQLKKQSELKKAMVKESTTSLSSEKKHDGGTEYDENHEEHGTALKHRESTEVSKL
NGSKGSMDLIELPGQHNRKASAVSAASHTLEELEELERPCPPCWYKFADIFLKWDCCAPW
IRFKKWVYFIVMDPFVDLGITICIVLNTVFMAMEHYPMTPEFEHVLSVGNLVFTGIFTAE
MVLKLIAMDPYYYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLGIIVFIFAVVGMQLFGKSYKDCVCKISQDCELPRWHM
TDFFHSFLIVFRILCGEWIETMWDCMEVAGQSMCIIVFMMVMVIGNLVVLNLFLALLLSS
FSGDNLASSDEDGEMNNLQIAISRITRGIDWVKAYIITHIRRLLGLNPKEEEKKGNDLVL
NHVVTVESEDETKEELKQLDGALRMAVVPIAKGESDVESPYDDESSSENEENIDEKKKLN
DADDSSSCSTVDKPPEAEEADSEDEPDPITPVDCCTEKCIRRCPCLDVDITKGRGKTWWN
LRKTCFAIVEHNYFETFIIFMILLSSGALAFEDIYIEQRRVIKIILEYADQVFTYVFVIE
MLLKWVAYGFKTYFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRPLRA
LSRFEGMRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGKFYYCFNYTSEEYFQ
ADVVNNKSECFDLINSGMDETRWMNTKVNFDNVGMGYLALLQVATFKGWMDIMYAAVDSR
EVEMQPYYESNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKSKLGGQDLFMTEEQK
KYYNAMKKLGSKKPQKPIPRPQNCLQGFIFDIVTKQFFDILIMCLICLNMITMMVETDDQ
SQEVEEILYFINFIFIVLFTGECVLKIIALRQYYFHIGWNIFDFIVVILSILGLVLADII
EKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFS
IFGMSNFAYVKKEAGIDDMFNFETFGNSIMCLFMITTSAGWDGLLSPILNNPPDCDPDVE
NPGTDVKGNCGNPGVGIVFFCTYIVMSFLVVVNMYIAIILENFNVATEESSEPLCEEDFE
MFYETWEKFDPDASQFIDYNALSDFCDTLKDPLRIPKPNMVKLISMDLPMVPGERIHCLD
ILLALTAEVLGESGEMDMLKSSMEEKFMANNPSKASYEPITTTLRHKQEDVAAKVIQRAY
RKYKLKCSHTKGAHSIRQKHEKPLCVALQNEVVLHSAPFAIPDSTYVDNLRESTV
NT seq 5388 nt   +upstreamnt  +downstreamnt
atggctaaaaagcggaagatctcattgttggaggcatgggtccggaatcgggccgcgcaa
ccgaagaaagcagaaaagccgaaactatggccgcaacaatcggcgttgctgagagacccc
gagctggtttcgtctctcgtccagcagaatgtgaagatggcatgtttgcttctccccgca
ggcaccgatgtgttccgccgcttcacgccggagtcgctggccgagtgtgagcgactcaag
gccgaggcagatgccgaagaggctcagaggaaagcccagaacattgagatccttgaagag
gacctgcccaaaccctccaaagacctggaagttggaaaatccttaccgtttatctatgga
gaccctccacctgagctccttaacatccctctggaagagctcgatccctactacaaatcc
aagaaaactttcatcgtgatcagcaaagggaatacaatcaacaggttcaacgtggatcca
gcctgttacgttctcacccccttcaaccccatccgcagggttgccatccgagtactcata
cactcattattcagcatgttcatcatggtgacgatcctgtccaattgtgtgttcatgacc
atgagcaacccgccagaatggagcaaaattatggagtacgtgtttacggggatctacacc
ttcgaggctctgattaaagtcttgtccagagggttctgtatcggagacttcacattcctt
cgagatccatggaactggctggatttcatggtgatcagcatggcgtacatcactgagttt
gtggacttgggaaatgtctcagctctgaggaccttccgtgtgcttcgagccctgaaaaca
atcaccgtaattcctggtctgaaaaccatcgtcggtgcgctgattcagtccgtgaagaag
ctgggagacgtcatgatcctcaccgtcttctgtctcagcgttttcgcgctcattggcctg
cagctgttcatgggaattctgcgcaacaagtgcatccagtggcctcctgcaagcatgaat
gacaccatggataccaacagcactttcgactttgaacagtacttcgacaataatgagaat
tactaccacctggatggtagcttagatccactgctgtgtggaaacagttcggatgctggg
cgatgtcccgagggatacgtgtgtatgaaagcagggaggaatccgaattatggatacacc
agctatgacagcttcgggtgggccttccttgccctcttccgcctcatgacacaagacttc
tgggaaaacctgttccagttgactctccgggcagcagggaagacctacatgatcttcttc
gtagtcatcatcttcttaggctccttttacctgatcaacctgattttggcggtggtggca
atggcgtatgcggagcagaacgaagccaatatggctgaagctaaagagaaggaggaggag
tatgccaagatcatggagcagctcaaaaagcaatctgagctgaaaaaagcgatggtgaaa
gaaagcacgacatcgctctcgagcgaaaagaaacacgacggcggcactgagtatgatgag
aatcatgaagagcatggcactgccctaaaacacagagagtctaccgaggtgtccaaatta
aatggatccaaaggaagtatggacttaatagaactacctggccagcacaacaggaaagcc
agtgcagtgagtgctgcaagccatacactagaagaattagaagagttggaaagaccatgt
ccaccttgctggtacaagtttgcagacattttcctaaagtgggactgctgtgcaccatgg
atcagattcaaaaaatgggtgtactttattgtgatggatccttttgtggacttgggcatc
accatctgcatcgtactaaacacggtgtttatggccatggaacattatccgatgactcct
gagttcgaacatgtgttgtctgttgggaatttggtgttcacgggcatcttcacggctgag
atggtcctcaaactcatagcgatggacccatactactacttccaggtcggctggaatata
ttcgacagcatcatcgtgaccatgagtcttgtggaactcggcttggctaatgtacaaggg
ctgtctgtgctccggtccttccgacttatgcgtgtcttcaagttggcaaagtcatggcct
accctgaacatgctgattaagatcattggtaactctgtgggtgccctgggaaacctgacc
ctcgtcctgggcatcatcgtcttcatcttcgctgtggtgggcatgcagctgtttgggaag
agctacaaggactgtgtttgtaaaatctctcaagattgtgaattgccacgttggcacatg
acagacttcttccactccttcctaattgtgtttcggatcctgtgtggcgagtggattgaa
accatgtgggactgcatggaagtggcaggccagtccatgtgcattatcgtcttcatgatg
gtcatggtgattggaaacctggtggtcctgaatctcttcctggcattgctgctcagctcc
ttcagtggagacaacctggcatcgtcagacgaagatggtgaaatgaacaacctgcagatt
gccatatcaagaatcaccaggggcatcgactgggtcaaggcctatattatcacgcacata
aggcgcttgttgggcttgaatccgaaggaagaggagaagaaaggaaatgatctagtcctg
aaccacgtggtcacagttgagtcagaggacgagaccaaggaggagctgaaacaacttgac
ggtgctcttagaatggctgttgttcctatcgcaaagggagagtctgatgttgaaagccct
tatgatgatgaaagttcttctgagaacgaagagaatatcgatgaaaaaaagaaactgaac
gatgcagacgattcgtccagctgcagcaccgtggacaaacctccagaggcggaagaggcg
gattcagaagatgaaccagatcccatcaccccagtggactgctgcacagagaaatgcatt
agacgctgcccatgcctggatgtggacatcaccaagggcagaggaaagacatggtggaac
ctccgtaagacctgtttcgccattgtggagcacaactactttgagaccttcatcatcttc
atgattctcctcagcagcggtgccttggcgtttgaggatatttacattgagcagcgacga
gtgattaaaatcattctcgaatatgctgatcaggtcttcacctacgtttttgtcattgag
atgctcctgaaatgggttgcgtatggcttcaagacctacttcacgaacgcttggtgctgg
ctggacttcctcattgttgatgtctcgctgatcagcttgacggctaacatcctgggttac
tcggagctcggccccatcaaatccctgaggaccttgagggctctgaggccgcttcgcgcc
ttgtccagatttgagggaatgagggtggtggttaacgccctggttggagccatcccatcc
atatttaacgtgatgctggtgtgtctgatcttctggctgatcttcagcataatgggcgtg
aacctgtttgctggaaaattctactattgctttaattatacctctgaagagtatttccaa
gctgatgtggtgaacaacaaaagtgaatgctttgatctgatcaattccggtatggatgaa
acgcgatggatgaacacaaaggtcaacttcgataacgtgggaatgggctacctcgccctg
ctgcaagtggcaacatttaaaggttggatggacatcatgtatgctgctgtggattctcgt
gaggtggagatgcagccatattatgagtcaaacctctacatgtacctgtactttgttatt
ttcatcatcttcgggtcgttcttcacactcaatttattcatcggtgtcatcattgataat
ttcaaccaacaaaaatcaaagttaggagggcaagacctcttcatgacagaggagcagaag
aaatactataacgctatgaagaaactcggctctaagaaaccacagaaaccgatcccacgc
ccccagaactgcttgcaaggcttcatcttcgacattgtcacaaagcagttcttcgacatc
ctgatcatgtgcttgatctgtctgaacatgatcaccatgatggtggagaccgatgaccag
agccaagaggttgaagaaatcttgtacttcatcaacttcatctttattgtcttattcact
ggcgagtgcgtgctcaagatcatcgccctgcgacagtactactttcacatcggatggaat
atttttgattttatcgtggtcattctttcaatcttgggtttggtcctagcagacatcatt
gagaagtactttgtttcacccacgcttttccgcgtcatccgacttgccagaatcggacgt
gttctgcgtctgatccgaggtgctaaaggcatccggactctgctgttcgccttgatgatg
tccctccctgccctgttcaacatcggcctcctcctctttttaatcatgttcattttttcc
atattcggcatgtccaactttgcctatgtgaaaaaagaagccggcattgatgacatgttc
aattttgagacctttggaaacagtataatgtgtctgttcatgatcacgacctccgccggc
tgggacgggcttctgtcccctatcctcaacaaccctcccgactgcgacccggacgtcgag
aatcccggcacggatgtgaagggtaactgcggaaaccctggagtgggaatagtgttcttt
tgcacctacattgtgatgtccttccttgtggtggtcaacatgtacatcgccatcattctg
gagaacttcaacgtggcaacggaggaaagcagcgagcctttatgcgaggaagactttgag
atgttctacgagacctgggagaagtttgatccggatgcttcgcagttcatcgactacaac
gcgctgtccgatttctgtgacaccctgaaagatccgctgaggatcccgaagccgaacatg
gtcaagctgatcagcatggacctgccaatggtacccggggaaaggatccactgtctcgac
atcctgctggctctcacagccgaggtgctcggcgagtctggggaaatggacatgctcaag
tcgagtatggaggagaaattcatggcgaacaacccctctaaggcatcgtacgagccgata
accaccactcttcgacataagcaggaggacgtggctgctaaggtcatccagagagcctac
cgcaaatacaaactgaagtgttctcacacaaagggagcccacagcatcagacaaaagcac
gagaagcctttatgtgtagctctgcagaatgaggtggtcttacactctgcccctttcgcc
atccctgactcgacctatgtggacaacttgagggagtccactgtgtaa

  All links  
Gene (45)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (9)   
   Pfam (9)   
All databases (67)   

Download RDF
DBGET integrated database retrieval system