[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Ictalurus furcatus (blue catfish): 128621481
Entry
128621481         CDS       T09387                                 
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu03320  PPAR signaling pathway
ifu04148  Efferocytosis
ifu04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    128621481 (rxrga)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ifu03000]
    128621481 (rxrga)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ifu03310]
    128621481 (rxrga)
Transcription factors [BR:ifu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    128621481 (rxrga)
Nuclear receptors [BR:ifu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   128621481 (rxrga)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 DUF7573
Other DBs
NCBI-GeneID: 128621481
NCBI-ProteinID: XP_053503252
Position
17:complement(18983369..18999432)
AA seq 431 aa
MDHTEYLHLSSSVQVDNSHLRPSSHAPIGSMVTHLHPSVISGIASPYAVITSSSSLSSTT
SSLPSTPNMGFNPQMNTLDASRDVKPPANISSSYQCLSPGSLSKHLCSICGDRSSGKHYG
VYSCEGCKGFFKRTIRKDLTYTCRDCKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEE
RQRGRDKNDNEVDSSSGLNEEMPVEKILDAELSVEPKTDTYIQTNADTSTNDPVTNICQA
ADKQLFTLVEWAKLIPHFSQLPLDDQVILLRAGWNELLIASFSHRSVSVKDGIVLGTGLH
VHRNSAHTAGVGSIFDRVLSELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSSPSEVEA
LREKVYASLESYTKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFL
MEMLEAPHQIT
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggatcatactgaataccttcatctgagttcttcagtacaggttgacaacagtcacctg
aggccatcctcccatgcacccatcggctccatggtaacacacctccacccttcggtcata
agcggtattgcatcaccctacgctgtcatcacctcctcctcatcattgagctcaaccact
tcatccctgcctagcacacctaacatgggcttcaatcctcagatgaacaccctggatgcc
tcaagagatgttaaacctcctgctaacatcagtagcagttatcagtgccttagtccaggc
tctctgtccaaacacctgtgctccatatgtggagatcgatcttctggtaaacactatgga
gtatacagctgtgaaggctgcaagggcttcttcaagagaactatccggaaagacctgaca
tacacatgccgggactgtaaggagtgtttaatagataagcggcagagaaaccgctgtcag
tactgccgctatcagaaatgcctggcaatgggaatgaagagggaagctgtacaggaagaa
aggcaacggggtcgagataaaaatgacaacgaggttgattccagcagcggtttaaacgaa
gaaatgccagtggagaagattttagacgccgaattatccgtggagccaaaaacagacacc
tacatccagactaatgcagacacctcaacaaatgaccccgtaaccaacatctgccaggca
gctgataaacagctgttcaccctggtggagtgggcaaaactcatcccgcacttctctcag
ctacctctggatgaccaggtcatcctcctgcgagcaggctggaacgagctgctcatcgca
tcgttctctcatcgctctgtgtcagtgaaggatggcattgtgttaggcacaggcctgcat
gtccaccgcaacagtgcacacactgcaggagtggggtccatctttgacagggttctttct
gagctggtgtctaaaatgaaggacatgcagatggataagacggagctcggctgcctcaga
gccatcgttctcttcaacccagatgccaaaggtttatccagtccatctgaggtagaggca
ctgagggaaaaagtttatgcctcactggagtcatacaccaagcacaaatatccagaccag
ccaggcaggtttgcgaagctcctgctgcgtcttcctgctcttcgctccattggcctcaag
tgtctcgagcatcttttcttctttaagctcatcggtgatactccaatagacacgttcctc
atggagatgctggaagctccacaccaaatcacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system