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KEGG   Hirundo rustica (Barn swallow): 120765987
Entry
120765987         CDS       T09369                                 
Symbol
TPM2
Name
(RefSeq) tropomyosin beta chain isoform X1
  KO
K10374  tropomyosin 2
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt04260  Cardiac muscle contraction
hrt04261  Adrenergic signaling in cardiomyocytes
hrt04814  Motor proteins
hrt04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    120765987 (TPM2)
   04820 Cytoskeleton in muscle cells
    120765987 (TPM2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:hrt04812]
    120765987 (TPM2)
Cytoskeleton proteins [BR:hrt04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     120765987 (TPM2)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ PUMA_CC ERM_helical ATG16 CENP-F_leu_zip Crescentin Snapin_Pallidin TMF_DNA_bd YscO SlyX DUF16 WS_DGAT_cat Lebercilin FPP Fez1 DUF1664
Other DBs
NCBI-GeneID: 120765987
NCBI-ProteinID: XP_039947235
Position
Z:complement(20549197..20562659)
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKY
SESVKEAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEEADRKYEEVARKLVVLEGELERSE
ERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLGEKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaaactggacaaggagaatgccatcgac
cgcgccgagcaagcggaggctgacaagaagcaggcggaagatcgctgcaagcagctggag
gaggaacagcagggcctgcagaagaagctgaagggcactgaggatgaggtggagaagtac
tccgagtctgtcaaggaggcccaggagaagctggagcaggcagagaagaaagctacagat
gctgaggctgaagtggcttccctcaaccgccgtatccagctggtagaggaggagctggat
cgtgcccaggagcgtctggccactgccctgcagaagctggaggaagctgagaaggcggct
gatgaaagcgagagaggcatgaaggtcatcgaaaacagggccatgaaagatgaagagaag
atggaactccaggaaatgcagctgaaggaggcgaagcacatagcagaggaggctgaccgc
aaatatgaggaggttgctcgcaagctggttgtccttgagggagagctggagcgctcagag
gagagggcagaggtggcagagagtaaatgtggtgacctagaggaggagctgaaaattgtc
accaacaacttgaagtccctggaggcccaggctgacaagtattccaccaaggaggataag
tacgaggaggaaatcaagcttctaggggaaaagctgaaggaggctgagacccgggcggag
tttgcagagaggtctgtggcgaagctggagaaaaccattgatgacctagaagatgaagtg
tatgcgcagaagatgaagtacaaagccatcagcgaggagctggacaatgcacttaacgac
atcacctccctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (18)   
   Pfam (18)   
All databases (50)   

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