[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117766121
Entry
117766121         CDS       T07778                                 
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:hhip04040]
    117766121 (scn4ab)
Ion channels [BR:hhip04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   117766121 (scn4ab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH
Other DBs
NCBI-GeneID: 117766121
NCBI-ProteinID: XP_034448725
Position
8:complement(23492391..23523101)
AA seq 1788 aa
MAPMLPPLGVEVFRRFTPASLEEIQQRHEAEEKEDQRRKEKNIEVAEEDLPKPASDLEAG
KPLPFIYGDPPPGLLNSPLEELDPFYQSHKTFIVLSRGNIIYRFNAEPACFLLSPFSRLR
TFAIRILIHSLFSLFIMMTIMTNCVFMTMSDPPSWSKTVEYVFTFIYTFEATIKVLSRGF
CVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLKQKCVLIPPLLRNNSSDVDPKTFYH
GNITLSNQTCGNDTGTSNFDFYEYINNPENHYFLPGNMDPLLCGNSSDAGVCPEGFMCLK
TGRNPNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLVSKQRRLERCHHWLQLSPVALSH
LSLSLQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNKATLSEAKHKEEDY
AEILDALKKRDEEAACMAVLSESHNPNATQSHDQDHTVIEDFEDDQRPCPVCWYAFADVF
LKWNCCDCWRWLKQRLNTIVMDPFVDLGITMCIVFNTVFMALEHYPMTEEFEELLSIGNL
VFTGIFTAEMVFKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGLADVQGLSVLRSFRLMR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRIAE
DCKLPRWHMNDFFHAFLIIFRVLCGEWIETMWDCMEVSGQAMCLIVFMMVMVIGNLVVLN
LFLAMLLSSFSGDNLAAPEDEGENNLQIAINRINRAVSWTRSGIVEHIWTLMGKKNHEQE
HIGVDGEDDNKISKDILPLTFVTSDQQLSEINSLSCSHDNVKSSYNNITFLRVPIAKAES
ESESETPENEDEEGEEEENHSECDESSFCSTVQTLPDIKEDEDDEDHESNTPEDCCTNKC
YHRCPFLDIDPSKGRGRVWSNFRRTCFSIVEHNYFETFIIFMILLSSGALAFEDIYLEQR
RVIKMVLEYADQVFTYVFVIEMLLKWIAYGFKTYFTNAWCWLDFVIVDVSLVSLTANILG
YSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMG
VNLFAGKFYYCFNATSAERFHPDDVNNKTECLALINANFNDARWKNLKVNYDNVGMGYLS
LLQVATFKGWMEIMYAAVDSRDVESQPMYEDNLYMYLYFVCFIIFGSFFTLNLFIGVIID
NFNQQKAKMGGTDLFMTEEQKKYYNAMKKLGSKKPQKPVPRPKNKFQGLVFDLVTTQFFD
ILIMVLICLNMVTMMVETDEQSAEKEMILYWVNLVFIIIFTTECSLKIIALRQHYFAVGW
NIFDFVVVILSVVGLLLADIIEKYFVSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALM
MSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFNFENFGNSMICLFMITTSA
GWDGLLSPIMNTPPDCDPDLENPGSMVRGNCGSPAVGIVFFTTYIIMSFLVVVNMYIAII
LENFNVATEESSELLCEDDFEMFYETWEKFDPNASQFIQYSQLSDFCDILQDPLRIPKPN
TIKLIHMDLPLVPGDKIHCLDVLLALTAQVLGDSGAMDSLKANMEEKFMANNPSKVSYEP
ISSTLRRKHEEVAAMVIQRAYRKHLLRRTVKVASYKYRKKTRGHQDEDLSLETKGLVFKR
ISQLYGDNQDSAESFAQVELQSEFLLHAAPPVTAPNLLQDENLRESIV
NT seq 5367 nt   +upstreamnt  +downstreamnt
atggcacctatgctgccccctcttggcgtggaggtctttagacgctttacacctgcttca
ctagaggaaatccaacagcgacatgaagctgaagagaaagaggatcagagaaggaaggaa
aagaacatcgaggtagcagaggaagatcttcctaaaccagcaagtgaccttgaggctggg
aagcccctaccattcatctatggagaccccccccctgggctcctcaacagcccattggag
gagctggatcccttctatcaatcacacaagacgttcatcgtgctcagtagaggaaacatc
atttacaggtttaatgctgaacccgcctgtttcctgcttagtccattcagtcgtttgaga
accttcgccatcaggatactcatccattctttattcagcttattcatcatgatgacgatt
atgacaaactgtgttttcatgacgatgagtgatccgccatcttggagcaagactgtggaa
tacgtgtttacgttcatctacacgtttgaagcaacaatcaaagttttgtcacggggattc
tgtgtcggagacttcaccttcctcagagacccctggaactggctggacttcatggtcatc
agcatggcatatctgacagagttcgtagatttgggaaacgtttctgcgttgcgaaccttc
agagttcttcgagcactgaagaccatcacagtcatccctggtctgaagacgattgtcgga
gctctcatccaatcagtgaagaagcttgctgatgtcatgatcctgacggtgttctgcctc
agtgtcttcgctctgatcggtctgcagcttttcatgggaaacctgaaacagaagtgtgtc
ctgatacctccgttgcttaggaacaactcttctgatgttgatcctaaaaccttttaccat
ggcaacatcaccctcagcaaccaaacctgtggcaatgacacaggaaccagcaactttgat
ttctatgagtatatcaacaacccagaaaatcattacttccttcctggaaacatggatcct
ctgctctgtggaaacagttctgatgcaggggtctgtccagagggtttcatgtgtctgaaa
acgggtagaaatccaaactacggttacaccagctatgactcgtttggttgggcatttctg
gctctgttcagactcatgacccaggacttctgggaaaatctcttccagctcgtaagtaag
cagcgcagattagagagatgtcatcactggttacaactctcacccgttgctctctctcac
ctgtctctctctcttcagacattgagagcagcaggtaaaacctacatgatcttctttgtg
gtcgtcatcttcctgggctcgttttacctcattaacctgatcctggcggtggttgcaatg
gcgtacgctgagcagaataaggccacactttctgaggcaaaacataaagaggaggactac
gctgagatcctggacgcgctgaagaagagagacgaggaggcagcctgcatggcggtgctt
tcagaatcacacaacccaaatgcaacgcagagtcatgatcaagaccacactgtcatagaa
gactttgaggatgaccagaggccgtgtcccgtgtgttggtatgccttcgctgacgtcttc
ttgaagtggaactgctgcgactgctggaggtggctgaaacagcggctcaacaccatcgtc
atggacccgtttgttgacctcggcatcaccatgtgcatcgttttcaacaccgtctttatg
gccttggagcattatccaatgacggaggagtttgaggagctgctgagcatcgggaacctg
gttttcacagggatcttcacagctgagatggtcttcaaacttctggccatggacccgtat
tactactttcaggtgggctggaacatctttgacagcatcattgtcaccatgagtctggtg
gagctgggactggctgatgttcagggcctgtctgtgctgcgctcattccgattgatgcga
gtctttaagttggccaagtcgtggccaaccctcaacatgctgatcaagatcatcgggaac
tctgtgggggctctggggaacctgactctggttctagcgatcattgtcttcatctttgcc
gtcgtcggtatgcagctgtttgggaagaactacaaagattgtgtctgtcgcatcgcagag
gactgtaaacttcctcgttggcacatgaacgactttttccacgccttcctcatcatcttt
agagtcctgtgtggagagtggatcgagaccatgtgggactgcatggaggtctcaggtcag
gccatgtgtctgattgtcttcatgatggtcatggtcatcggaaacctagtggtcctgaat
ctgtttctggccatgctgcttagctcgttcagtggagataatctggcagctccagaagat
gaaggagaaaacaatttgcagattgccataaatcggatcaacagggctgtgtcctggaca
aggtctggtatcgtggagcatatctggactctgatggggaagaagaaccatgaacaagaa
cacatcggagttgacggtgaagatgataacaagatctcaaaggacattttacctttgacc
tttgtgacttcagaccaacaactgtcagagataaacagcctcagctgtagtcatgacaat
gtgaaaagtagctacaacaacatcaccttcctgagggtgcccattgccaaggcagagtcc
gaatcagaatctgaaacacctgaaaatgaagatgaggagggtgaagaggaagaaaaccat
tcagaatgtgacgagtcgtcattctgcagcacagtacagacacttcctgatatcaaagag
gatgaagatgatgaagatcatgagtcaaacacacctgaggactgttgtaccaacaagtgc
tatcatagatgtccgttcctggacatagacccttccaagggcagagggagggtctggtct
aacttcaggagaacatgtttctccatcgtagaacacaactactttgagactttcatcatc
ttcatgattctgctgagcagtggagcactggcattcgaggacatttacttggagcagcgt
cgggtgataaagatggttctggaatatgcagaccaggtgttcacctacgtgtttgtaatc
gaaatgcttctcaagtggatcgcatatggattcaagacctactttaccaacgcatggtgc
tggctggacttcgtaatcgtagatgtatctctggtatcactgacagcaaacatcctggga
tactcagacctgggagccattaagtctctaaggactcttagagctctgaggcccttgagg
gccctgtcccgctttgaggggatgagggtggtggtgaatgctctggtcggagcgatcccg
tcgatctttaatgttcttctcgtctgtttgatcttctggttgatcttcagcatcatggga
gtaaatctgtttgcaggaaagttttattactgtttcaacgcaacatcagcggagaggttt
catcctgatgacgtcaataacaagactgagtgtctcgcactgatcaacgcaaacttcaat
gacgctcgctggaagaacttaaaggtcaactacgacaatgtgggaatgggctacctgtcg
ctgctgcaagtggccacatttaaaggttggatggagatcatgtacgcagcagtggactcc
agagacgtggagtcacagccgatgtatgaggacaacctgtacatgtacctgtactttgtc
tgtttcatcatctttggctccttcttcactctcaacctcttcattggagtcatcattgac
aatttcaaccagcagaaagcaaagatgggaggaacagatcttttcatgacggaagagcag
aagaaatattataatgccatgaagaaactgggctccaagaaacctcagaaacctgtacca
cgcccaaagaacaagttccagggtttggtctttgaccttgtgacaacacagtttttcgac
atcctcatcatggtgctgatctgcctcaacatggtgaccatgatggtggagacggatgaa
cagagcgcagagaaagagatgatcctgtattgggtcaacctcgtcttcatcatcatcttc
acgacagagtgctctctgaagatcatcgcgctcaggcagcactacttcgctgtgggctgg
aatatctttgactttgtggtcgtcatcctgtccgtcgtaggtctcctcctcgctgacatc
atagagaagtactttgtctcgccaacgctctttcgtgtcatccgattggctcgtatcggt
cgaattcttcgtctaattcgtggagcgaagggaatcaggaccctgctcttcgccctgatg
atgtcacttcctgccctcttcaacatcggcctcctcctcttcctcatcatgttcatcttc
tccatctttgggatgtcaaactttgcatacgtgaagaaggaggccatgatagatgacatg
tttaactttgagaactttgggaacagtatgatctgtttgtttatgatcaccacgtcagct
ggatgggatggtctgctgagtcccatcatgaacacaccaccggactgcgacccagaccta
gagaacccaggatccatggtccgagggaactgcggcagcccagcggtgggtattgtcttc
ttcaccacatatatcatcatgtccttcctcgtggtggtcaacatgtatatcgcaatcatc
ctggagaacttcaacgtggccacagaggagagcagcgagctgctgtgtgaggacgacttc
gagatgttttatgaaacctgggagaagtttgatcccaacgcgtcacagtttattcagtac
agtcagctatcggacttctgcgacattctgcaggatcctctgaggattcccaaaccaaac
accatcaaactgatccacatggatcttcctctggttcctggagataagattcactgtctg
gatgtcctgctcgcactcactgcacaggtgttgggtgattcaggagcaatggattctctc
aaagcaaacatggaggagaaattcatggccaacaacccatccaaggtgtcatatgaacca
atcagcagcaccctgaggaggaagcatgaagaggtggcagcgatggtaatccagagagcg
tacaggaaacacctcctgcggcggacagtcaaagtggcatcctacaaatatcgcaagaag
acgagggggcatcaagatgaggatttgtctctggagacaaaaggacttgtgtttaaacgt
atcagtcagctgtacggagacaaccaggactctgctgagtcattcgctcaggtggagctt
cagagtgagtttctccttcatgctgctcctccagtcactgccccgaacctactgcaagat
gagaacctgagagagtcaatcgtgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system