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KEGG   Hippocampus comes (tiger tail seahorse): 109512175
Entry
109512175         CDS       T04969                                 
Symbol
col6a6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04510  Focal adhesion
hcq04512  ECM-receptor interaction
hcq04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109512175 (col6a6)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109512175 (col6a6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hcq04147]
    109512175 (col6a6)
   00536 Glycosaminoglycan binding proteins [BR:hcq00536]
    109512175 (col6a6)
Exosome [BR:hcq04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109512175 (col6a6)
Glycosaminoglycan binding proteins [BR:hcq00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109512175 (col6a6)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   109512175 (col6a6)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI VWA_CoxE
Other DBs
NCBI-GeneID: 109512175
NCBI-ProteinID: XP_019719265
Position
Unknown
AA seq 2694 aa
MAGERCLLLVLMGAMCFHGNAAQRTVCTQEAVADLVFMVDGSWSIGAENFERIRQFLSTL
VNSFDVGPDRVRMALVQYSTTPRTEFLLNTFQKKAEILQYVSTLPYMGGGTHTGQGLDFM
LSKHFVEEAGSRANQNVAQIAVVITDGKSQDDVESHAAELKRKGIVLYAIGIKDADEDQL
REIASEPHSQHVYSVSDFAALQGISQSIAQTLCTTVEEVKRQLLQVSQECAKATVADVVF
LVDGSSSIGISNFQEVRGFLRSVVSGFDVGPDKVRVGLAQYANEPFQEFLLKDHMDKKSL
LAALDKFPYRAGGTETGKAIDFIRTQFFTEGAGSRMNQRVPQIAVVITDGDSADDVVEAS
RRLRQHGVIVYAIGVGQANMVELEAIANRPSDNFRFFIDSFQALQKLSDGLLQTVCTSME
NQRQALSERFADIFILVDGGLSQAEFQQVRSLLIRLTNQLTFGLSAHRLGVAEYGQDTKV
EFRLNTHQTNEETSAAIRRFRLRKLQPNEPRNLGAALEYARSNFFTSQAGSRADQGVRQF
LVVLSGKDSDDDVDKQSRLLKAQGVKVVGLSLGASIPQMRVVASSPSIVYQSTVNVLPSL
KATFEDQELPANLTGECKGAKLADIVFIIDESGSIGTPNFQLVRTFLHSVVSGLDVAPTK
VRVGIVMYSDKAKAQVYLNTFDDKSELLSFIKIMPYHGGGTNTGVALNFTREHVFTKERG
SRKDKGIQQVAVVITDGKSQDDVSNAAVALRRAGVKIYTVGVKNANHAQLVKMASHPPSK
HIFTVDSFSKLQALEQKLQNIVCHNILRQAVSVNMRRSSIKEGCLQTDEADIFFLIDHSG
SIYPTDFYDMKKFIIEFISTFRIGPQHVRLGVAKYADAPNLEFDLTAYTDAKSLEKAVEG
IVQVGGGTETGRALEFMGPQFDRAVATRGQKVPEYLVVITDGKSTDQVKGPAEKLRAQGV
IIYAIGVKNADMAELREISGDSKKTFFVNNFDALNPIKDDIITDICTTDVCKDVPGDLLF
LVDSSGSIYPQDYEKMKDFMKSVVGKSNIGQSDVHVGVMQFSTIQQLVFPLNRHFTKDQM
LQAIDGMQQIGGGTNTGEAIAALSPYFDASQGGRPGVRQRMVVVTDGESQDNVKIPAAAL
RRKGVVAYAIGVMDANTTQLLEITGSPERVFAERDFDALKDLESQVAMEICDPDRECKKT
EKADIIFLVDGSTSITLDKFQSMQKFMSSMVSQTTVGKDLTRFGVILFSSEPKSVFTLNQ
YESKRDVLKAISALKSPYGDTYTGKALEYALPFFNTDNGGRAALNVPQILMVITDGDATD
QNNLRQPSVALRDKGITVFSIGVEGAIRDQLEIMANHDSSRVFYVDNFAALETLHKNITF
VLCNSTKPACEKQKADLIFLLDQSGSISQRDYTIMKNFTTQLVGSFKVSQDLVRVGLAQF
SDIFQHEFYLNQFFTHESVIKRIMALNQRGGGTLIGLALDAIRSHFEESNGCRRSAGVSQ
NLVLITDGESQDEVQDAADHLRTLGVEVFAIGVGGAHDLQLLQITGRHDRLFTVENFDSL
DKIRLKLVDTICKSKPIEEQTSCSVDIAMGFDISQRSGLAGEMLVSGHNKLRTFLPEIVH
YASTIQGLCCIGPDPIKTKIGYRVVGQDGRSLYDFKFKPYDPNDDVVTKVMTLNLNVPTR
LNSAMLRSFGQKFKEDSRGGVKVLVIFSDGLDEDVVTLEYESELLQKSGVDALLMVGLQG
APDLAQLQMLEFGRGFGYKVPLSIGMQSVGSTVLKQLDTVSNRECCNVMCKCSGHEGIRG
SRGSLGSKGRSGLVGYPGFPGEEGVPGERGSPGPSGPQGVQGCAGVRGSKGYRGLRGNRG
EDGEVGLDGVNGDQGVSGQDGSRGERGHPGNPGIPGIRGEAGLKGQRGLRGDPGEPGRDN
TVRGPKGDVGNPGLPGEPGQDGRAGDAGGPGNAGPDGRRGPLGEKGAAGAPGDPGVSGST
GASGPQGPRGVRGQPGPRGIPGLPGPQGGPGSAGGAGSTGRRGGHGQKGQPGDPGVRGVQ
GTLGPRGTPGQDGRDGYGPAGPKGIKGDPGFPGYPGLVGESGLQGPKGLPGRKGNQGRGG
NSGRTGQAGQPGEPGYEGHKGPRGPAGGKGKTECELITFIRDNCACSMDLGSCPALPTEL
VVALDMSEDVTPAAFERQRAALLSLLEDITVAESNCPTGARVAVVAYSAHTKYLVRFHDY
RRKTQLLDAVRNVALERTSNRRQLGAAMRFVAHNVLKRVRSGAMMRKVAVFFSNGPSQDI
SDVVTAIMEYRALNVVPAVISTRNAPAISRAMELDDTGNSIFTVLGRDATADLRKVKNCA
ICYDPCRRSQECAFVLESPPPQQVDADVVMLVDGSREIQADEYAGAQQLLGSVVEQLAIS
PQPGRADARARVAVVQQSGARDTKLEFGLRAYQEGRLMRSHLLSNMRQEGGSSALGHALN
LGLREAMTDGSPRRRKVVLAVVGTRTAPEDRQVLRAAALKAKCQGVALFVVTVGERYDRE
QVEDLASEPRQQHLLHLGRLQQEEQDYVRRFFRVFMAALDKGFTTYPPPSFKRICQQMDQ
DGGQIFLNGQGQAQVFADQPRGGPGGHLQEQTGQTDVVHMLSPEEDDTPMPRSTDASSTD
PCLLGEDAGDCRDYAMMWFYDSEQRQCKRFWYGGCGGNANRFSTMEACQDACVA
NT seq 8085 nt   +upstreamnt  +downstreamnt
atggcgggggagcggtgtcttctccttgttctcatgggggccatgtgtttccatggcaac
gctgcacagaggacagtatgcactcaagaagccgtggctgacctggtcttcatggtggac
gggtcatggagcatcggcgcggagaattttgagcgcatccgccagtttttgtccacgctg
gtcaacagcttcgacgtgggtccagaccgggtccgcatggctctggtccagtacagcacg
acaccaagaaccgagttcctgctcaacaccttccagaagaaggccgaaatcctccagtat
gtcagcacgctgccctacatggggggcggtacccacacgggtcaaggcctggattttatg
ctgagtaagcattttgtggaagaggccgggagcagggcgaaccagaacgtggcccagatc
gccgtggtcatcacggacggaaaatctcaagatgacgtggagtctcacgccgcggagctg
aagaggaaaggaattgtcttgtacgccatcgggattaaagacgcggatgaagatcagctg
agggagatcgccagtgaaccgcatagtcagcacgtctacagcgtgtccgactttgccgcg
ctgcagggaatttctcagagcatcgcccaaaccttgtgcacgaccgtggaggaggtcaaa
cgacaacttctgcaagtgtctcaagaatgtgccaaagccaccgtagccgatgtggtcttc
ctggtggatggctcttccagcatcggcatttccaatttccaggaggtcagaggctttctc
cgaagcgtggtgtccggtttcgacgtcggtcctgacaaggtccgcgtgggtttggcgcaa
tacgccaatgaaccttttcaagagttcttgttgaaagatcacatggacaagaagtctctg
ctggccgcactggacaagttcccctaccgagcgggaggcacggagacgggcaaggccatc
gacttcatacggacgcagttcttcacggaaggcgccggaagccgaatgaaccagagggtg
cctcagatcgctgtggtcatcacggacggagactccgccgatgacgtagtggaggcgtca
cggcgcctcagacaacacggggtcatcgtctacgctatcggagtgggacaagccaacatg
gtcgagttggaggccatcgccaaccgaccgtcggacaacttccgtttcttcatcgacagt
ttccaagctcttcagaaactgagcgacggtctgctgcaaaccgtgtgtacgtccatggag
aaccagaggcaagctttatccgaaaggtttgcagacatcttcatcctggtggatggcggc
ttgagtcaagccgagttccagcaggtccgaagcctcctgatccgactgaccaaccaactg
accttcgggctctcagcacaccgcctcggcgtggctgagtacggtcaagacaccaaggtg
gaatttcgtctgaatactcaccagaccaacgaagagaccagcgccgccatccgccgcttc
cggctgcgtaaactacagcccaacgagccacgcaacttaggtgcagccttggagtatgcc
cgctcaaactttttcaccagccaggcgggaagccgggcagaccagggtgtccgacagttc
ctggttgttctaagtgggaaagattccgacgatgacgtcgacaagcagtcccgcttactc
aaagcccaaggcgtcaaagtggtgggtctaagtctcggtgcatccataccacagatgcgg
gtggtagcctccagtccttccatcgtctaccagtccaccgtcaacgtccttccttctctg
aaagctacttttgaagaccaggaactgccggccaatcttactggagaatgtaaaggagcc
aaactggcagacatcgtgttcatcatcgatgagtccggaagcatcggaaccccaaacttc
cagctggtacgcacgttcctgcactcggttgttagcgggctggacgtggctccaaccaag
gtgcgagtgggcattgtgatgtacagtgacaaagcaaaagcgcaagtctacctcaacacc
tttgacgacaagagcgagttacttagtttcatcaaaataatgccataccacggcggcggc
actaatacgggagtcgccctcaatttcacgcgggagcacgtgttcaccaaagaacgaggc
agccggaaggacaagggcatccagcaggtggcggtggtgatcaccgacgggaaatcccaa
gacgatgtgagcaacgctgccgtggccctccgtcgggcgggcgtcaagatctacacggtg
ggcgtcaagaacgccaaccacgcccagctggtgaagatggcgtcccacccgccgagcaag
cacattttcaccgtggacagtttctccaaactccaagcgctggagcagaagctgcagaac
atcgtttgccataacattctgcggcaagcggtcagcgtcaatatgagaagaagtagcatc
aaggaaggctgcttgcaaactgatgaagcggacatcttcttcctgatagatcactctggc
agtatctaccccaccgacttttatgacatgaaaaagttcatcatcgagtttattagtacc
ttccgcatcgggcctcagcacgttcgcttgggcgtcgccaagtacgcagatgcgccaaac
ttggaatttgatctgacagcctacacggacgccaaaagcctggagaaggcggtggaggga
atcgtgcaggtggggggcgggacggaaacaggaagggcgctggagttcatgggcccgcag
tttgatcgcgccgtggccactcgtggtcagaaggtgccggaatacctcgtggtcatcact
gacgggaaatccacagatcaggtcaaagggcccgctgagaagctacgagctcagggtgtc
atcatctacgccatcggagtgaagaacgctgacatggctgagcttcgggagatatccggt
gactccaagaagacgttctttgtcaataattttgatgctctgaaccccatcaaggatgac
atcatcactgacatctgcaccacagatgtttgtaaagatgtacccggagacctcctgttc
ttggttgacagctccgggagcatttatccacaggactacgaaaaaatgaaggacttcatg
aaatcggtcgtcggcaagtccaatatcgggcagagcgacgtccacgtgggcgtcatgcaa
ttcagcaccatccagcagctggtgttccccctcaaccgccatttcaccaaagaccaaatg
ctgcaagccatcgacggcatgcaacagattggaggagggacgaacacgggagaagctatc
gcggctttatcgccgtactttgacgcgtcccaaggcgggcgccccggtgtgaggcaaagg
atggtggtggtaaccgatggagaatctcaagataatgtcaaaattcccgctgcggccctg
aggcgcaagggtgtggtggcctacgccatcggggtgatggatgccaacaccacccagctg
ctggagatcaccggatcaccggaacgagtctttgctgagagggactttgatgccctgaag
gacttggagagccaagtggctatggagatctgtgatccagatcgagaatgcaagaagacc
gagaaggcggacatcatcttcctggtggacggctctacgagcatcaccttggacaagttc
caaagcatgcagaagttcatgtcatccatggtcagccaaacgacggtcggaaaagacctc
acccgctttggagtcattctgttctcatccgaacccaaatcagtttttactctcaaccaa
tatgagtccaagcgagatgttctaaaagcaatatcagctctcaaatctccgtatggggac
acctacacaggaaaggccttggaatacgccttgcccttcttcaacaccgacaacggcggt
cgggcagcgctcaacgtgcctcagattctgatggtcatcacagacggcgacgccaccgat
cagaacaatctgcgtcaaccttccgtcgcgctgcgagacaaaggcatcaccgtcttcagt
atcggagtggaaggcgccatcagggaccagttggagatcatggcgaatcatgactcaagc
cgagttttctacgtggacaattttgccgcgctggaaactttgcacaagaacatcaccttt
gttctctgcaactccacaaaaccagcctgcgagaagcagaaagccgatctgatcttcttg
ctcgatcagtcgggcagcatcagccagcgggactacaccatcatgaagaactttaccacg
cagctggtgggcagcttcaaagtcagccaggatttagtacgcgtcggactggcccaattc
agtgacattttccaacacgagttctacctgaaccaattcttcactcacgagtcggtgatc
aagcgcatcatggccctgaaccagcgcggcggcggcaccctgatcgggctcgccctggat
gccatcaggagtcactttgaggaatccaacggttgccgcaggtcggccggcgtctctcaa
aacctggtgctgattacagacggcgaatcccaggatgaagtgcaggacgccgccgaccac
ctcaggactctcggggtggaggtgtttgccattggcgtgggtggcgcgcacgacctgcag
ctcctgcagatcacaggcagacacgacagactctttaccgtcgagaactttgacagtttg
gacaagatcaggctaaagttggtcgacaccatctgtaaatccaagcctatcgaagagcag
acaagctgcagtgtggacatcgccatgggcttcgacatttctcaaagaagcggactcgcc
ggcgagatgttggtcagcggccataacaagctcaggactttcttgcccgagattgtccat
tacgcctccaccatccaggggctgtgctgcattgggcccgacccgatcaagaccaaaatc
ggttacagggtggtgggccaggacggacgatctctttacgacttcaagttcaaaccctat
gaccccaatgatgacgtggtgaccaaggtcatgactttgaatttgaacgttcccactcgg
ctcaacagcgccatgctcaggtccttcgggcagaaatttaaggaggactcccgtgggggc
gtgaaggttctggtcatcttctcagacggactcgatgaagacgtagtgacgttggagtac
gaatcagaactgctgcaaaagtctggtgtggacgcgctgctgatggtgggcctgcagggg
gcgccggacctggcacagcttcagatgttggagttcggccgagggttcggttacaaagtc
ccgctcagtatcggcatgcagagcgtgggcagcacagtactcaagcagcttgacactgtg
tccaaccgcgagtgctgcaacgtcatgtgcaaatgttcaggacacgaaggcatccgcgga
tctcggggttccctggggtcaaagggtcgctcagggctagtgggttaccccggcttccca
ggagaggagggcgttcccggtgagcgtggcagtcctggacccagtggacctcagggtgtt
cagggctgtgctggagtccgaggatcaaaggggtaccgaggcctgcgaggtaatcggggg
gaggacggagaagtcggactggacggcgtcaacggagaccagggcgtgtcaggacaagat
ggtagtcgaggagagcgaggacatcccggaaatccgggtattcccggtatccgaggggag
gcggggctcaagggacagcgaggcttgagaggagatccgggagaaccaggacgggacaac
accgtgcggggacccaagggagacgtcggaaatcccggattacctggagaaccaggacaa
gacgggagggccggagatgctggaggtcctgggaatgccggtcccgacggaagacgagga
ccccttggagaaaagggtgctgcaggagctcctggtgatcctggtgtgtcaggaagtact
ggtgcttcaggtcctcagggtcccagaggggtcagaggtcaacctggaccaagagggatc
cctggacttcctgggccacagggaggaccgggctcagcgggaggggcgggctccacggga
agacgcggtggtcacggtcagaagggacaacctggagatccaggcgtgcgaggagtgcaa
gggacgctgggaccacgtggcacgccgggtcaggatggcagagatggatatggaccagct
ggacccaaagggatcaagggagatccaggcttccccggttatcccggtttagtgggtgag
agcggcctgcagggtcctaaaggtctcccggggcgcaaaggcaaccaaggtcgcgggggc
aactcaggtcgcactggacaggcgggtcaacctggagagcccggctacgagggacacaag
ggcccacgaggtcccgccgggggtaaagggaagacggaatgcgaactgatcacgttcatc
cgagacaactgtgcttgctccatggacttgggctcttgcccggctctcccgacggagctg
gtggtggcgctggacatgtccgaggatgttacgccagcggcgttcgagcgccagcgtgcg
gccctgctgtccctcctggaggacatcaccgtggcggagagcaactgccccacgggggcc
cgcgtggccgtggtggcctacagtgctcacaccaaatacttggtccgcttccacgactac
cggcgcaagacgcagctgctggatgccgtgaggaacgtggccctggagcgcacatccaac
cggcggcagctgggcgccgccatgcgtttcgtggcgcacaacgtgctcaagcgcgtgcgg
tcgggcgccatgatgagaaaggtggccgtgttcttctccaacgggccgtcgcaagacatc
agcgacgtggtgacggccatcatggagtaccgcgccctcaacgtggtgccggccgtcatc
tccacgaggaatgcgcccgccatcagccgcgccatggagctggacgacacgggaaactcc
atcttcaccgtgctggggagggacgccactgctgacctgaggaaggtgaagaactgcgcc
atctgttacgacccgtgccggcgttcgcaggagtgcgcgtttgtcctggagtcgccgccg
ccgcagcaagtggacgcggatgtggtgatgctggtggacggctcgcgcgaaatccaggcc
gacgagtacgccggcgcgcagcagctcttgggctccgtggtggagcaactagccatcagc
ccccagcccggccgggccgacgcccgcgcccgcgtggccgtggtacagcagagcggcgcc
cgtgacaccaagctggagttcggcctgcgggcttaccaggaagggcggctcatgaggtcg
cacctgctgagcaacatgcgccaagagggaggatcctcggctctggggcacgccctgaac
ctcggcctgagggaggcgatgacggatggcagcccccgcaggaggaaggtggtgctggcg
gtggtgggcaccaggacggcgcccgaggaccgccaagtgcttcgcgccgccgctctgaag
gccaaatgtcagggggtggcgctgttcgttgtgacggtgggcgagcgctacgaccgcgag
caagtggaggacttggccagcgagcccaggcagcagcacctgctgcacttgggacgactt
cagcaggaagaacaggactacgtgcggaggttcttcagggtcttcatggccgcgttagac
aagggcttcaccacatacccaccgccgtctttcaagcggatctgccagcagatggatcaa
gatggcggacagatcttccttaatggtcaagggcaggcgcaggtgtttgccgaccagccg
cggggagggccaggcggccatttgcaggagcaaaccggacagacggacgtcgttcatatg
ttgagcccagaagaagatgacacgccaatgccgcggtcgactgatgccagctccacagac
ccctgcctgctgggcgaggacgcgggcgactgccgggactacgccatgatgtggttctac
gacagcgagcagcggcagtgcaagcgcttctggtatggcggatgcggcggaaacgccaac
cgcttcagcaccatggaggcctgccaggacgcctgtgtggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (152)   
   KEGG ORTHOLOGY (1)   
   RefGene (148)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (172)   

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