Entry |
|
Name |
(RefSeq) syntaxin-41-like
|
KO |
|
Organism |
gab Gossypium arboreum (tree cotton)
|
Pathway |
gab04130 | SNARE interactions in vesicular transport |
|
Brite |
KEGG Orthology (KO) [BR:gab00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108471117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:gab04131]
108471117
Membrane trafficking [BR:gab04131]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
108471117
|
SSDB |
|
Motif |
|
Other DBs |
|
Position |
4:complement(24170840..24173307)
|
AA seq |
319 aa
MATRNRTVQYKKTRDAVKSVRAPLSSSASSSGGPVIEMVNASFLRSNRSSYAPLSTEEDP
GPSSGAFTIGLPPSWVDDSEEIAANIQRAKAKMAELAKAHSKALMPSFGDGKEDQRAIEV
LTKEITDLLRKSEKRLRNLSNNGSSEESTLQKNVQRSLATDLQTLSVELRRKQSTYLKRL
QKQKEDGADLEMNLNDNRYRLDDDDFGVMGFNEHQMSKLKQSEFSTVEREREITQVVQSV
NELAQIMKDISALVIDQGTIVDRIDYNIQNVATSVEEGFKQLQKAERTQKKGGMVMCATV
LVILCFIMIVLLILKELLL |
NT seq |
960 nt +upstreamnt +downstreamnt
atggctaccagaaatcggaccgtccagtacaaaaaaaccagggatgcagtgaagagcgtt
cgagctcctctctcttcctcagcctccagttccggcggtccggttattgaaatggttaat
gcttctttccttcgctccaatcgctcttcctacgctcctctcagcactgaagaagaccct
ggtccttcaagtggcgcgtttacgataggtttaccgccgtcgtgggtcgacgattcggaa
gaaatagcggctaatattcaacgagctaaggccaagatggcggagttagccaaagctcat
tccaaggctttaatgccttcatttggagacggcaaagaagatcaacgcgcgattgaggtt
ttgaccaaagaaattacagatctattaaggaaatctgagaagcgattgcgaaatctttcg
aacaacggatcttccgaggagtccactctccaaaaaaacgtacagcgttcgctcgcaaca
gaccttcagaccctatctgtggagctgcggcggaaacaatcaacttatttgaaacggcta
caaaagcaaaaagaggatggtgctgacttggagatgaacttgaatgataacagatatcga
ttggacgacgatgacttcggtgtcatgggttttaatgagcaccaaatgagcaagctgaag
cagagtgagttctcaactgtagaaagggagagagagattacgcaggttgtccagtctgta
aatgagcttgctcaaatcatgaaagacatctcagcccttgtgatagaccagggcacaatt
gttgatcgaatagactacaatatccaaaatgttgctacatcagtcgaggagggcttcaaa
cagctccagaaggctgaacgaacacagaagaagggagggatggtgatgtgtgcaacagtg
ctggttattttatgcttcatcatgatagtcctattgatcctaaaagagttattgctatga |