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KEGG   Etheostoma spectabile (orangethroat darter): 116687621
Entry
116687621         CDS       T08457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D-like
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp04010  MAPK signaling pathway
esp04020  Calcium signaling pathway
esp04218  Cellular senescence
esp04260  Cardiac muscle contraction
esp04261  Adrenergic signaling in cardiomyocytes
esp04270  Vascular smooth muscle contraction
esp04530  Tight junction
esp04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:esp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:esp04040]
    116687621
Ion channels [BR:esp04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   116687621
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 116687621
NCBI-ProteinID: XP_032369019
Position
4:17531200..17593753
AA seq 2079 aa
MSANGPAPDPVPEAPPASTPAPAAAPAPAHVAPPAPPALPAPASTTIPAGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYVP
FPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLELLTKEEKVESEAEGEGIHPSMQGHGGKPGGFDVKALRAFRVLRPLRLVSGVPS
LQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSDVIAEEEPAP
CAISGHGRQCPINGSVCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDA
MGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLK
GYLDWITQAEDIDPDNEDEADEGTKRNPSVPPSETESVNTENQNGEEEKTPCCGPLCQKI
SKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVIILVFLNTLTISSEHYNQPMWLTQVQD
VANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEVMSPLGIS
VFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQVFGGKF
NFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCFYFIILF
ICGNYILLNVFLAIAVDNLADAESLNTDEGDKKGDKKEDEKDDKDEEEEIDDTAAEEEDP
EVPSGPRPVISDLIKKEKITPIPEGSAFFIFSTTNPFRVFCHKLINHHIFTNLILVFIML
SSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEIVLKMTTYGAFLHKGAFCRNYFNLL
DLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNI
MIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSSSDECKGTYILYKEGDVNQPTIHKRLWH
NSDFNFDNVLMAMMALFTVSTFEGWPSLLYKAIDSNRENLGPIYNYRVEISIFFIIYIII
IAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKF
WYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSALFNYVMDILNMVFTAVFTVEMVLKLIA
FKPRGYFGDAWNVFDALVVMGSIVDIVLSEIDNTEDSARISITFFRLFRVMRLVKLLSRG
EGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFP
QAVLLLFRCATGEAWQEIMLACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAF
LIINLFVAVIMDNFDYLTRDWSILGPHHLDEFXRIWSEYDPEAKGRIKHLDVVTLLRRIQ
PPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEEL
RAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPA
QNNTAIALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMN
GGHRRSNGHQTNATQRPLQVQPPPHYAHMEQPVGRLSRANAMSHPNHHHHHNHHHHRHHN
SYGKSPKSTNINLNNANVSSLPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQGQRRR
YYETYVRSHGVDGHHPTIRREEEFDEDRFSGEYYSGEEFYEDDSMLSGDRYPNSDTEYET
PKGYHHPDSYYDDDEQPLYRDSRRSPKRRLLPATPQGNRRPSFNFECLRRQGSQDELPHQ
RTALPLHLMQHQVMAVAGLDSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDR
PHRESAASSHVSLRKSSWYTDDPEFSQRMYSPVHLQVPPEYHNQYHQKRGSATSLVEAVL
ISEGLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLNGGMAPSINGVNVFPLLTS
RDYELQDTAASYSDEEPETEPRAPYEEDLADEMICITTL
NT seq 6240 nt   +upstreamnt  +downstreamnt
atgagcgccaacgggcctgccccagacccagtcccagaggcccctcccgcctcaacccct
gcccctgctgcggccccagccccagcacatgttgcaccacccgcacctcctgccctgcct
gccccagcatctactaccatcccggcaggtgcgttggcacagaagaagcggcagcagtat
gccaaaagcaagaaacagggcagtaatgccaacagcaggccaccgagggctctgttctgc
ctcaaacttaacaaccccatacgcagggcctgcatcagcctggtggagtggaagccattt
gatatatttatattaattgctatttttgccaactgtatggccttagctgtctatgtcccc
ttccctgcagatgattccaactccacaaaccatgacctggaaaccgttgagtatgccttc
ctcatcattttcacaattgagacctttctgaagattattgcttacggcttggtgatgcac
cagaatgcgtacgtgagaaacggttggaatatgctggattttgtcattgtcgtcatagga
ctcttcagtgttgtcttggagcttttgaccaaagaagagaaggtagaaagcgaagcagaa
ggagaaggtatccatccatcaatgcaaggacatggaggaaaaccaggtggattcgatgtt
aaagcccttcgagccttccgtgtgctgcgacccctgcgactggtctcaggagtacccagt
ttacaggtggtgttgaactccatcattaaagccatggtccctctccttcacattgccctc
ctggtcttatttgtcatcatcatctatgcgattatcggcctggagcttttcatcggtaaa
atgcacgcaacctgctttattcctggctcagatgtgatagcagaagaggaaccagctcca
tgtgcgatctcagggcatgggcggcaatgccccatcaatggcagcgtgtgcagggaaggc
tggcatggtcccaacggtggcatcaccaactttgacaacttcctgtttgccatgctgaca
gtgtttcagtgtatcaccatggagggctggacggacgtgctatactggatgaatgatgct
atgggccttgagcttccatgggtgtactttgtcagtcttgtgatcttcggctcctttttc
gttcttaacctggttttgggtgtgttgagcggagagttctccaaggagagagagaaggct
aaagcccgtggagacttccagaagctgcgtgaaaagcagcagctcgaggaggatctgaaa
ggttacttggattggatcactcaggctgaagacatcgaccccgacaatgaggatgaggct
gatgaggggacaaagcgcaacccaagcgttccacccagcgaaacagaatctgtgaacact
gagaatcaaaacggggaggaggagaagacaccatgctgcggaccactgtgtcaaaaaatt
tcaaagtcaaagttcagtcggcgctggcgccgttggaacaggttctgccgcaggaagtgc
cggttggctgtcaaatcggtgcctttctattggttggtcatcatcctggtgttcctcaac
acgctcaccatatcatcagagcattacaaccagccaatgtggctcacacaagtacaggat
gtggccaacaaggtgctgctagccctgttcacatgtgaaatgttggtgaagatgtacagt
ctcgggctacaggcctattttgtatcactgttcaaccgctttgactgctttgtggtgtgt
ggaggaatcactgaaaccattctggtcgagctggaagtcatgtctcctctcggcatctct
gtgttccgctgcgtccgcctgctgaggatcttcaaagtcacacgtcactggcagtcttta
agtaacctcgtggcatctctgctcaactccatgaagtccattgcttccctgctgctgctg
ctcttcctcttcatcatcatcttctcgctgctgggcatgcaggtgtttggtggaaagttc
aactttgacgagacccagaccaagaggagtacatttgacaactttccccaagcccttctc
actgtgtttcagatcctgaccggagaagattggaacgctgttatgtacgatgggatcatg
gcgtatggaggcccttcctcttctgggatgattgtgtgtttttacttcatcatcctcttc
atctgtggaaactatatccttttgaatgtcttcttggctatcgctgtggacaacttggca
gatgcagagtctctcaacacagacgaaggagacaagaaaggggacaaaaaggaggatgaa
aaagatgacaaggatgaagaagaggagattgacgacactgcagcagaggaggaagatcca
gaagttccatcggggcctcggccggtcatctctgacctaataaagaaggagaagatcact
cctatcccagagggaagcgccttcttcatctttagcaccacaaacccgtttcgtgtgttt
tgccacaaactcatcaaccaccacatattcaccaacctcatcctggtgttcatcatgctc
agttctgtctcactcgctgctgaggatccgatccgaaacttctcagctcgcaatattata
cttggttactttgactatgctttcacggctatctttactgttgagatcgtattgaagatg
acaacatatggagcctttctacataaaggggcattctgtaggaattacttcaacctcctg
gacctgttggtggtgggagtttcccttgtctcttttggcattcagtcctcggccatctct
gtggtgaagattcttagggtcctgcgtgttcttcgaccgcttcgtgcaatcaaccgggcc
aaaggcctaaagcacgtggtgcagtgtgtgtttgtggccatcagaactatcggtaacatc
atgattgtcactactctgctccagttcatgttcgcctgtataggtgtgcagctatttaag
ggaaaattctatcgctgcacggatgaagccaagtccagctcagatgagtgcaagggcacc
tacatcctgtataaggaaggagatgtgaaccagccaactatccacaaacgactgtggcac
aacagcgacttcaactttgataacgtcctcatggctatgatggctctgttcaccgtgtcc
acttttgaaggctggccttctttactgtacaaggcaatcgactccaacagggaaaacctc
ggtcccatttacaactaccgcgtggagatttccatcttcttcatcatctacatcatcatc
attgctttcttcatgatgaacatctttgtaggttttgtgatcgtcacatttcaggaacaa
ggagagaaagagtacaaaaactgtgaactcgacaagaaccagcgtcagtgtgtggagtac
gctcttaaggcacgtccgctgaggaggtacatccctaagaacccgtaccagtacaagttc
tggtatgtggtgaactccactggctttgagtacatcatgtttgtgctcattatgctcaac
acgctctgcctggctgtacagcactacggacagtcagcgctcttcaactatgtaatggac
attcttaatatggtcttcactgctgtgtttactgtggaaatggttctcaaactcatcgct
ttcaaacccaggggctattttggggatgcctggaatgtgttcgacgccctggttgtgatg
ggcagcatagtagacattgttctcagtgagattgataacacggaggacagcgctcgcatc
tccatcaccttctttcgtctgtttcgagtcatgcggctggtcaagctgcttagcagaggg
gagggcattcgcactctgctctggactttcatcaaatccttccaggctctgccatatgtt
gctcttctgatagccatgctgttcttcatctacgctgtcattggcatgcaggtgtttgga
aaggttgccatggtggacggcacgcacatcaacagaaacaacaactttcagaccttccct
caggctgtgctccttctcttcagatgtgccactggagaggcatggcaggagatcatgttg
gcctgtatgccagggaaactgtgtgacccagagtctgattacaaccctggggaggagatg
acatgtggcagtggatttgcaataatttacttcatcaccttttacatgctctgcgccttt
ttgattataaatttgtttgtggccgtcatcatggacaactttgactatctcacacgtgat
tggtccattcttggtccacaccacctcgatgaattcnagagaatttggtcagagtatgac
ccggaggctaagggcagaattaaacatctggatgttgtgacacttcttcgtcgaatccag
cctcctctcggctttggcaaactatgccctcacagagtggcttgcaagaggctggtagcc
atgaacatgcctctgaacagtgacggcacagtcatgtttaacgccactttgtttgcactg
gtgcgcactgccctgaagatcaaaacagaaggtaatctagagcaggccaatgaagagctg
cgagctgtcattaagaaaatctggaagagaaccagcatgaagctgctggatcaagtggtg
cctcctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacag
gactactttaggaaattcaagaaacgtaaagaggaaggcttggtgggtgctcacccagcg
cagaacaacacagctatcgcattacaggctggccttcgcacgctgcatgatattgggccc
gaaattcgccgagcgatatcatgtgatctgcaagatgacgagctagtagactttattcca
gaggaagacgaggaaatttataggcgtaatggtggactctttggcaaccacctcatgaac
ggtggtcatcgacgatccaacggccaccagaccaacgccacacagcgacctctgcaggtg
cagcctccacctcactacgcccacatggagcagccggtgggacgcctgtctcgagccaac
gcaatgtcccaccccaaccaccatcaccaccacaaccaccatcaccaccgccaccacaac
tcctacggaaagtcgcccaaatcaaccaacatcaacctcaacaatgccaacgtgtccagt
ctgcccaacggaggacaccatcgttactatgaacatgcacctcccaatggctacccaggt
cttcgcagctcctactacgactacgacaagcctcggacaccccagggtcaaagaaggcgc
tactatgagacctatgttaggtcccacggagtcgatggacaccaccccaccatccgcaga
gaggaggagtttgatgaagaccgcttctctggggagtattacagtggggaggagttttat
gaagacgacagtatgctgtcaggggacaggtatccaaacagtgacacagagtatgagact
cccaaaggttaccatcatcccgacagttactatgacgatgacgagcagcctctctaccgt
gactcacgaaggtcaccaaagagaaggttgcttcctgccacacctcaaggtaacaggagg
ccatccttcaactttgagtgtctgcgcagacaaggtagccaggacgagcttccacatcag
cgtactgctctaccactacaccttatgcagcaccaggttatggctgtagcaggcctggac
tccagcagagcccaccgcctctccccaacccgctccacccgctcctgggccactccccct
gccactccggccagtaaagaccaatcaccatactacacccctctcatccgtgtggaccgc
ccacacagggagagtgctgctagcagccacgtgtctctgcgcaagagctcctggtacacg
gatgacccagagttctcccagaggatgtactcacctgtccacctgcaggtgccacctgag
tatcacaaccagtatcaccagaagagaggcagcgccaccagccttgtggaagcggtgttg
atatcagaagggcttgggagatatgccaaggatcccaagtttgttgctgccacaaagcat
gaaatagcagatgcgtgtgagatgacaatagatgagatggagagtgctgccagccacctg
ctgaacggagggatggccccaagcatcaatggtgtcaacgtgttcccccttctgacttca
agggactatgaactgcaggacactgcagccagctacagcgacgaggagcctgagacagag
ccgagagctccttatgaggaagacctggcagatgagatgatctgcatcactactttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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