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KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125893922
Entry
125893922         CDS       T08419                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510  Focal adhesion
efo04512  ECM-receptor interaction
efo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:efo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125893922
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125893922
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:efo04147]
    125893922
   00536 Glycosaminoglycan binding proteins [BR:efo00536]
    125893922
Exosome [BR:efo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125893922
Glycosaminoglycan binding proteins [BR:efo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   125893922
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   125893922
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 Kunitz_BPTI VWA_CoxE DUF5557
Other DBs
NCBI-GeneID: 125893922
NCBI-ProteinID: XP_049440867
Position
LG8:complement(3296871..3361644)
AA seq 2535 aa
MTGRTSLLFSLIIAAYFSGIAAQTRECENATVADIVFLVDGSSSIGLTNFQEVRTFLRNI
VRALDIGRDNIRIGLAQYNEEPHKEFLLRDHMDERSLLGAVEKIPYRQGNTNTGKAMEFL
LKEYFTKQAGSRIDQRVPQIAVVLTDGESADKVEAPAQQLRQHGVIVFGIGVGNVNKTEL
ETIANWPPERFLHTIDSYQALQRLTDRLLQTVCDSVEYELEALADRYADIFFLVDSGTTQ
RQFATFRGDLNKLINQLNVSESTYRIGLAQYGESTTVDFFLNTYETKQEIQNAVKRFRLR
PQPNRSRNLGSALQYAKTHFFTKEAGGRADQGARQYLVVVTGKDSDDPVSRDAQLIKSEG
VTLIGMSADADMRALDVFDYTFPDLKVLVLKDIMTTEIKESTTGDCKGANLADIVFIVDE
SGSIGNSNFMLMRKFLGSLVSSLDVDKSRVRVGIVTYNRVSTPQAFLNTFSHKAEVLQFI
KLLPYRGGGTYTGAALNFTRSNVFITEKGSRKDRGIKQVAVVITDGQSEDPVSEAAISLR
RAGVTVYCVGVENAVEEELKKMASYPPDRHVFHVKSFTELKVLKQSLQKILCENIIERDI
EVITSEDKTKRACIQKDEADIYFLMDDSGSIGNQDFQEMKDFIIKFIKTFHIGPDNVRVG
LVKYSDDPHMQIDMAEYSDVQSLEEAVEGISHDGGGTETGKALSSMAQRFKRSARDHKVP
EYLIVITDGESTDDVSAPAAELRAQGIIIYAIGVKDSKEDELKQIASDPKKAIFVNNFDA
LKSINKDIIIDICSEDACKEVQGDIFFLTDSSESISEEGFKAMKEFMKSVISKTDIGQSK
VHVGVMQFSTNYNLEFRLDQHYNADDIASAIDGMQQMNEGTLTGKAITEVSQYFDKNRGG
RPELTQRLIVITDGEAKDKVAGPAEALRNKGVVIYTIGVMSANMTQLLEISGSSERVYSE
KDFDGLKDLESKVALKICEKECVIEKADVIFLVDSSKSIDSTQYQSMRRFMEKIVNQTTV
ARNLTQFGLISYSDNPMLHFALNTYDSKRKVLDAIPKVKPPQGDTYTGKAMEFSLKYFGA
EYGGRKGVPQILMVITDGEATNPYNLKGPSDKLRQNGVIVLSIGVKDAKRDELLTMAGGD
ESKVFQVEDFAALEAQYKKITSILCNNTKPDCKVADLVFLLDRSSSLNPDEHKIMKTFTE
DLVNKFNVSKEAVHVGLAQFSTLPHHEFYLMDFLQKKPLSEKIKQLEYTGGNTYLAEGLR
HISKYFDVRFGSRDEVPKNLVVITDGDAHDLDEVEDVAENLKNKNIEMFAIGVGDVHPLP
LLQITGDPERLFTVRNFNGLTHIKQKVIDVMCDQPPTPPTPPPPPVTFTPPPIYTTTPIP
TKPQIIDCTIDIAMGFDISQRTGAPGEMLISGHAKLQTFLPKIAYYVSSVQDLCCARQKT
IKTNIAFQVVDVDGSSLYDTNFEEYNEEVVNKVMGLRISQPTYFNSALLNVFKKKFRLRS
QARVKVLVIFSDGLDEDTMKLESVSEELRKSGVSALLTVALEGVRDPAQLQMVEFGRGFG
YNLPLSIGMPSVGSTILNQIDAVANRICCNVTCKCTGHEGMRGFPGKPGQKGRPGQKGQS
GFPGEEGVAGERGPPGPSGPPGIEGCPGPRGQKGFRGGSGDRGEDGEDGVEGINGEQGLT
GLDGARGEKGDPGNPGITGITGEPGQKGERGLRGDPGERGADNNKPGPKGEPGNPGLPGL
TGPDGLPGGDGEVGDPGPDGRRGSPGGKGLPGDPGDPGLPGSPGAAGPQGRRGGPGDRGP
KGINGSPGPQGPQGSPGDKGSAGRRGPNGQKGQPGEPGVKGAPGSEGPRGMPGEDGRDGF
GPKGSKGVKGDPGFPGYPGLAGEDGQKGTIGYPGRKGNQGRGGNSGRTGDPGPPGDKGAQ
GHRGPKGPPGEREPLLSECELVTLIRDNCQCCTGDKDCPAYPTELVFGLDMSGDVTETDF
DNQRKALVNLLEDINISESNCPNGARVAVVGYDASVTYLIRFQDYHRKKKLIETVKNLRW
DSVPERRNLGAAMRFVAHNLFKRVRAGVMMRKVAVFFSNGPSQESSEIVTAMMEYRALNI
VPVVISLRNAPAVERAMEVDDTRNFVYTMMGRDMAADLQKVKDCAICYDPCRRSQLCTFI
QDVPAPQEVNMDLVMVLDSSREIQADEYAGAQQLLGSVVQQLVVSPQPRRAGRQARVAVV
QQSGTRKPKVEFGLGTYQNHNLMRSHLLRNMTQQGGSSALGQTLEFTLRDVLLKAGQPRR
RRAMLTVVGTRAASEDQARLRYISQKAKCEGVALFVVTVGDRYDQAQVEELAGLPVEQHL
IHVGRLRPGEQDYAQRFFRVFLSTLTLGTNAYPPPSLRQMCSQLREPQEALAFENGQGSA
DLQMDFAEEFEEQRGGETQSRHRDVVETLTKEDSLSSLSGAEVNEPVILPAPETTTAIPK
DPCLLSQDAGGCQNYTIMWFFDSDKSRCSRFWYGGCDGNENRFKTQEDCVKLCLTRKRLR
RGGAARRFTGYRRSG
NT seq 7608 nt   +upstreamnt  +downstreamnt
atgacgggaagaacgagtctcctcttcagcctcatcatagcagcgtatttttctggcatc
gctgctcagacaagagagtgtgaaaatgccaccgtggccgacatcgtcttcctagtcgat
ggctcctccagcattggccttactaactttcaagaggtccggacttttctccggaacatc
gtaagggccctcgacatcggccgcgacaacattcggataggcttggctcagtacaatgaa
gaacctcacaaggagttcctgctgagggatcacatggacgagaggtccctgctgggtgca
gtggaaaaaattccctaccgacaaggaaacacgaatacaggaaaggccatggagttcctc
ctgaaagagtacttcaccaaacaggcaggaagccgaattgatcaacgggtgccccagatc
gctgtggtgctcacagatggggagtcagctgataaagtggaagcacccgcccagcaactg
aggcagcatggagtcattgtgtttggcattggggtgggtaacgtcaacaagacagagctt
gagaccattgccaactggcctccagaacgcttcctccacaccatcgacagctaccaggct
ctgcaaaggctgacggaccgcctgctgcaaactgtttgtgactctgtggagtatgaattg
gaagccttggccgacaggtacgcagatattttcttcctggtggacagtggcacaactcaa
agacagttcgcaacgttcaggggtgacctcaacaaattgatcaatcaacttaatgtctca
gagtccacctaccgtattggtttggcccagtacggcgaatctaccacagttgacttcttt
ctcaatacctacgaaactaaacaggagatccaaaatgctgtcaaacgttttcggctgcgc
ccacaacccaaccgatcacgtaacctgggcagtgctctgcagtacgccaaaactcacttt
tttaccaaagaggcagggggccgtgcagaccaaggcgcccgacagtacctggttgttgtg
actggaaaagactcagatgatcctgtgtctcgggatgctcaattaatcaaatcagaagga
gtgactcttattgggatgagtgcagatgcagacatgagggcattagacgtatttgactac
acattcccggatctcaaagtgcttgttctgaaggatatcatgacgactgagataaaggaa
agtacaactggagattgcaaaggagccaatctggcagacattgtgttcatcgttgatgag
tccggaagcattggaaactccaacttcatgctgatgcgcaagttcctggggtcacttgtg
agcagcctggatgttgataaatccagagtcagagtgggcatcgttacgtacaacagggtc
tcaacaccgcaggccttccttaacacgttcagtcacaaggccgaagtcctgcaattcatc
aagctcctgccttacagaggaggtggtacgtatactggagctgccctaaacttcacgcgg
agcaacgtcttcattacggaaaagggcagcagaaaggatagaggtatcaagcaggtggcg
gtggtgatcactgatggtcaatccgaggatcctgtgagcgaagctgcaatcagtctccgt
cgagctggtgtcaccgtttactgtgtaggagttgaaaatgccgttgaggaagaactgaag
aagatggcgtcttatcccccggacaggcatgtttttcatgtgaaaagtttcactgagctg
aaggtgctgaagcagagcctgcagaaaatcctgtgtgaaaacatcattgaaagagacatc
gaagtcatcacaagtgaagacaaaacaaaaagagcatgtatacaaaaggatgaggcagac
atctacttcctaatggacgactcaggaagcattgggaaccaagacttccaagaaatgaag
gacttcatcatcaagtttattaaaaccttccatattgggccagataatgtccgtgtgggg
cttgttaaatattctgatgatccacatatgcaaattgatatggcagaatattcagatgtc
cagtcactggaggaagccgttgagggtattagtcacgatggaggtgggacagagacagga
aaagccctatcatccatggcccagcgctttaagagatcagctcgggatcacaaagtccca
gagtacctgattgtcatcacagatggggaatccactgatgatgtcagtgctcctgcagca
gaactgagagcgcagggtatcatcatctatgccatcggcgtgaaagactcaaaagaagat
gagctgaaacagattgccagcgaccccaagaaggctatctttgtcaacaattttgatgcc
ttgaaatccatcaacaaggacatcatcatagacatctgctctgaagatgcttgcaaggag
gtacaaggcgacatcttcttcttaactgacagctctgagagcatttctgaagaaggcttc
aaggcaatgaaagagttcatgaaatctgtcatcagcaagaccgacatcgggcagagcaag
gtgcatgttggtgtcatgcagttcagcaccaattacaatctggagtttcgccttgaccaa
cactacaacgcagatgacattgcgagtgccattgatggtatgcagcagatgaatgaaggc
acactcacagggaaggccatcactgaggtgtcacagtactttgataaaaacagaggaggg
cgtcctgaactgactcagaggttgatagtgataacagacggtgaagccaaagataaggtt
gccggccccgctgaggctttgaggaataagggagtggtgatctacaccattggtgtgatg
agcgccaacatgacccagctgctggagatcagcggttcatcggagagggtgtattctgag
aaggactttgatgggcttaaggacttggagagcaaggtggccttgaagatctgtgagaaa
gaatgtgtgatagaaaaagctgatgtcattttcctggtggacagctccaaaagcatagat
tcaacacagtatcaaagcatgcgcaggtttatggagaaaatagtgaaccaaaccacggtt
gccaggaacctgactcagtttgggcttatttcctactctgataaccccatgttacatttt
gctctgaatacctatgactcaaaacgaaaagtccttgatgcaataccaaaggtaaagcca
ccacaaggagacacctacacagggaaggccatggaattctcattaaaatactttggcgct
gaatatggtggccggaaaggcgtgccacagattctcatggtgatcacagacggggaagcc
accaacccttacaacttaaaggggccatctgataaactacgacagaacggggtcattgtc
ctcagtattggagtgaaagacgcaaaaagggatgaactgctgacgatggctggtggcgat
gagtccaaagtcttccaagtggaagattttgcagctctggaagctcagtacaagaaaata
acttctatcctctgcaataacactaagccagattgcaaggttgctgacctggtcttccta
cttgatcggtctagcagcctcaacccagatgaacacaaaatcatgaaaaccttcacggaa
gacctagtgaacaaatttaatgtcagtaaagaagctgtgcatgttggactcgcacagttc
agcacattgccgcatcatgagttttacctcatggacttcctccagaagaagcctttgtct
gaaaagatcaaacaattagaatacaccggtggaaacacctaccttgcagagggcctgagg
cacattagtaaatactttgacgtgcggtttggcagtcgtgatgaggtccccaagaacctg
gtggtgatcacagatggcgatgctcatgatttggatgaagtggaggatgtggccgaaaat
ctaaagaacaagaatattgagatgtttgccatcggtgttggagacgtccaccccctgcca
ctcctgcagatcactggtgacccagagagactgtttactgtgcggaacttcaatggctta
acacatatcaagcaaaaggtgatcgatgtcatgtgtgatcaacctcctactccccctact
cctcctcctccccctgttaccttcactccccctccgatctatacgaccaccccaatccca
actaaaccccaaataatagattgcaccattgatattgccatgggatttgatatttctcaa
agaactggagctccgggtgagatgctgatcagcggccacgccaagctccagaccttcctg
ccaaagattgcctattatgtttcttcagtacaagacctgtgctgtgctcgccagaaaact
atcaagaccaacatcgccttccaagtggtagatgttgatggatcttccttgtatgacaca
aacttcgaagaatacaatgaggaagtggtgaataaagtcatgggcttgcgaatatctcaa
cccacatatttcaacagtgccctgctgaatgtcttcaagaagaagttcaggctcagatcc
caggctcgtgtgaaggtgctggtgatcttctcagatggactcgatgaagacacgatgaaa
ctggagtctgtatcagaggagctgcggaagtctggggtcagtgctttgctgactgtggct
ctagagggtgtgcgtgaccccgcccagctgcagatggtggagtttggccgaggattcggc
tacaaccttcctctcagcatcggtatgccaagcgtcggcagcaccatcctcaatcagatc
gacgcggtggcaaataggatatgctgcaacgtcacttgcaaatgtacaggtcatgaaggc
atgcgtggctttccaggaaaaccgggacaaaagggtaggcctggacagaagggccagtcg
ggcttcccaggagaggaaggagtcgctggtgaacgagggcctcctggaccaagtggacct
ccgggcatcgagggctgtcctgggcccagaggacagaagggcttccgaggaggttcaggc
gacaggggcgaagatggagaggacggagtggagggaatcaacggagagcagggactgacg
ggactcgatggagctcgaggagagaaaggagatccaggaaacccaggtatcacaggaatc
actggggagccagggcagaaaggagagcgaggactaagaggagatccgggtgaacgggga
gctgataacaacaagccaggacctaaaggagagcctgggaatccaggtttgccgggtttg
actggaccggacgggctgccaggtggtgacggagaagtcggagacccgggtccagatgga
agaagaggctctccgggtgggaagggtttaccaggagatccaggtgatccaggacttcct
ggcagcccaggtgctgctggtccgcagggacgcagagggggacccggtgatcgcggccca
aaaggaatcaatggttctcctggacctcagggaccacaaggatcacctggagacaaggga
tcagctggacgccgtggccctaatggacagaagggccaaccaggagagccgggtgttaag
ggagctccgggatcagagggacccagagggatgccgggtgaggacggcagagacggattc
ggacctaaaggatccaagggtgtcaagggagatcctggtttccctggttaccccggtctt
gcgggtgaggacggtcagaagggaactataggatatccaggacgtaaagggaaccaaggt
cgaggggggaactcaggcaggacgggagatccaggcccacctggagacaagggagctcaa
ggacacaggggtcccaaaggtcctcctggagagagagagcctctcctaagtgagtgcgag
ctggtcacgttaatcagagacaactgtcaatgttgcactggtgataaagactgtccagcc
taccccaccgagctggtgtttggtctggacatgtcgggggacgtgaccgagacagacttc
gacaaccagcgaaaagcccttgtcaacctgctggaggacatcaacatctctgagagcaac
tgtccgaacggcgctcgtgtcgctgtggtgggttacgacgccagtgtcacatacctgatc
cgcttccaggattaccaccgcaagaaaaagctgatcgaaactgtgaagaacctccgctgg
gactcagtgcctgagcggcgcaacctgggggccgccatgcgcttcgtggctcataacctc
ttcaaacgagttcgtgcaggagtgatgatgaggaaggtggctgtctttttctccaatggg
ccgtcacaggaaagttctgaaattgtcaccgccatgatggagtaccgggccctcaacatc
gtcccagtggtcatctctctgcgtaacgctccggctgttgaacgagcgatggaggtcgac
gacacaagaaacttcgtctatacaatgatgggacgggacatggctgcagacctgcagaag
gtcaaggactgtgcaatctgttacgacccctgtaggcgttcacagttgtgcaccttcatc
caggatgtcccagctcctcaggaagtcaacatggacctggtgatggtgttggacagctcc
agggagatacaggctgatgagtatgccggcgcccagcagctgcttggctctgtggtgcaa
cagctggtcgtgagcccacagccccgcagggccggcagacaggcccgtgtggctgtagtc
caacagagcggcacccgaaagcccaaggtggagtttggactaggcacctaccagaaccac
aacctgatgaggagccacctgctgcggaacatgacgcagcagggcggctcctcggcgctg
ggacagacgctggagttcaccctgagggacgtgctcctgaaggccggccagccccggagg
aggagggcgatgctaaccgtggtgggcacccgcgcggcttctgaggaccaagcccggctg
cgctacatctcccagaaggccaagtgtgagggggtggcgctgtttgtggtgacagtcggc
gatcgctacgaccaggcgcaggtggaggagctggccggtttgcctgtggagcagcacctg
atccacgtgggcagactgaggcctggcgagcaggactacgcccagcgcttcttcagagtc
ttcctctccaccctcacactggggacgaacgcatatcctcctccttcactgagacagatg
tgcagccagctgagggagccacaagaggctctagcatttgaaaacggtcaggggtcagca
gacctacagatggattttgcggaggagtttgaggagcagagaggaggagagactcagtct
agacaccgggacgtcgttgaaacgttgaccaaagaagacagcctgagttccctctcagga
gctgaagtcaatgaacctgtcatcctgccggcgccggagacgaccactgccatccccaaa
gacccctgtctcctcagccaggacgccggcggctgccagaactacaccataatgtggttc
tttgacagtgacaagagtagatgctctcgcttctggtacggcggctgcgacggcaacgaa
aaccgcttcaagactcaggaggattgtgtgaaactctgtctgacaaggaagcgattaaga
agaggaggagcagcaagacgtttcacaggatatcgccggagcggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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