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KEGG   Etheostoma cragini (Arkansas darter): 117942646
Entry
117942646         CDS       T07493                                 
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
  KO
K04851  voltage-dependent calcium channel L type alpha-1D
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04010  MAPK signaling pathway
ecra04020  Calcium signaling pathway
ecra04218  Cellular senescence
ecra04260  Cardiac muscle contraction
ecra04261  Adrenergic signaling in cardiomyocytes
ecra04270  Vascular smooth muscle contraction
ecra04530  Tight junction
ecra04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ecra04040]
    117942646 (cacna1da)
Ion channels [BR:ecra04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   117942646 (cacna1da)
SSDB
Motif
Pfam: Ion_trans CAC1F_C Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 117942646
NCBI-ProteinID: XP_034724078
Position
4:complement(14797870..14858618)
AA seq 2127 aa
MSANGPAPDPVPEAPPASNPAPAAAPAPAHVAPPAPPALPAPASTTIPAGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPIRRACISLVEWKPFDIFILIAIFANCMALAVYVP
FPADDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLELLTKEEKVESEAEGEGIHPSMQGHGGKPGGFDVKALRAFRVLRPLRLVSGVPS
LQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFIPGSDVIAEEEPAP
CAISGHGRQCPINGSVCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDA
MGLELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLK
GYLDWITQAEDIEPDNEDEADEGTKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPPSET
ESVNTENQNGEEEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVII
LVFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFD
CFVVCGGITETILVELEVMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIA
SLLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVM
YDGIMAYGGPSSSGMIVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKGD
KKEDEKDDKDEEEEIDDTAAEEEDPEVPSGPRPVISDLIKKEKITPIPEGSAFFIFSTTN
PFRVFCHKLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIVLGYADYVFTSMFTFE
IILKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLR
AINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNSD
ECKGTYILYKEGDVNQPTIHKRLWHNSDFNFDNVLMAMMALFTVSTFEGWPSLLYKAIDS
NRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQR
QCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLIMLNTLCLAVQHYGQSALF
NYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTFDALIVVGSVVDIAITEVNKLV
EPTETPQVDEQGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYV
ALLIAMLFFIYAVIGMQVFGKVAMVDGTHINRNNNFQTFPQAVLLLFRCATGEAWQEIML
ACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRD
WSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVA
MNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVV
PPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGAHPAQNNTAIALQAGLRTLHDIGP
EIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGHRRSNGHQTNATQRPLQV
QPPPHYAHMEQPVGRLSRANAMSHPNNHHHHHNHHHHRHHNSYGKSPKSTNINLNNANVS
SLPNGGHHRYYEHAPPNGYPGLRSSYYDYDKPRTPQAQRRRYYETYVRSHGVDGHHPTIR
REEELDEDRFSGEYYSGEEFYEDDSMLSGDRYANSDTEYETPKGYHHPDSYYDDDEQPLY
RDSRRSPKRRLLPATPQGILSPAACNRRPSFNFECLRRQGSQDELPHQRTALPLHLMQHQ
VMAVAGLDSSRAHRLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDRPHRESAASSHVS
LRKSSWYTDDPEFSQRMYSPVHLQVPPEYHNQYHQKRGSATSLVEAVLISEGLGRYAKDP
KFVAATKHEIADACEMTIDEMESAASHLLNGGMAPSINGVNVFPLLTSRDYELQDTAASY
SDEEPETEPRAPYEEDLADEMICITTL
NT seq 6384 nt   +upstreamnt  +downstreamnt
atgagcgccaacgggcctgccccagacccagtcccagaggcccctcccgcctcaaaccct
gcccctgctgcggccccagccccggcccatgttgcaccacccgcacctcctgccctgcct
gccccagcatctactaccatcccggcaggtgcgttggcacagaagaagcggcagcagtat
gccaaaagcaagaaacagggcagtaatgccaacagcaggccaccaagggctctgttctgc
ctcaaacttaacaaccccatacgcagggcctgcattagcctggtggagtggaagccattt
gatatatttatattaattgctatttttgccaactgtatggccttagctgtctatgtcccc
ttccctgcagatgattccaactccacaaaccatgacctggaaaccgttgagtatgccttc
ctcatcattttcacaattgagacctttctgaagatcattgcttacggcttggtgatgcat
cagaatgcgtacgtgagaaacggttggaatatgctggattttgtcattgtcgtcatagga
ctcttcagtgttgtcttggagcttttgaccaaagaagagaaggtagaaagcgaagcagaa
ggagaaggtatccatccatcaatgcaaggacacggaggaaaaccaggtggattcgatgtt
aaagcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtacccagt
ttacaggtggtgttgaactccatcattaaagccatggtccctctccttcacattgccctc
ctggtcttatttgtaatcatcatctatgcgattatcggcctggagcttttcatcggtaaa
atgcacgcaacctgctttattcctggctcagatgtgatagcagaagaggaaccagctcca
tgtgcgatctcagggcatgggcggcaatgccctatcaatggcagcgtgtgcagggaaggc
tggcatggtcccaacggtggcatcaccaactttgacaacttcctgtttgccatgctgaca
gtgtttcagtgtatcaccatggagggctggacggacgtgctatactggatgaatgatgct
atgggtcttgagcttccatgggtgtactttgtcagtcttgtgatcttcggctcctttttc
gttcttaacctggttttgggtgtgttgagcggagagttctccaaggagagagagaaggct
aaagcccgtggagacttccaaaagctgcgtgagaagcagcagctcgaggaggatctgaaa
ggttacttggattggatcactcaggctgaagacatcgaacccgacaacgaggatgaggct
gacgaggggacaaagcgcaaccgggtgactctggctgaccttactgagaagaagaaagga
aggtttgggtggttcagccagtcgtccgacactcatgcaagcgttccacccagcgaaaca
gaatctgtgaacactgagaatcaaaacggggaggaggagaagacaccatgctgcggacca
ctgtgtcaaaaaatttcaaagtcaaagttcagtcggcgctggcgccgttggaacaggttc
tgccgcaggaagtgccggttggctgtaaaatcggtgcctttctattggttggtcatcatc
ctggtgttcctcaacacgctcaccatatcatcagagcattacaaccagccaatgtggctc
acacaagtacaggatgtggccaacaaggtgctgctagccctgttcacatgtgaaatgttg
gtgaagatgtacagtctcgggctacaggcctattttgtatcattgttcaaccgctttgac
tgctttgtggtgtgtggaggaatcacggaaaccattctggtcgagctggaagtcatgtct
cctctcggcatctctgtgttccgctgcgtccgcctgctgaggatcttcaaagtcacacgt
cactggcagtctttaagtaacctcgtggcatctctgctcaactccatgaagtccattgct
tccctgctgctgctgctcttcctcttcatcatcatcttctcgctgctgggcatgcaggtg
tttggtggaaagtttaactttgacgagacccagaccaagaggagtacatttgacaacttt
ccccaagcccttctcactgtgtttcagatcctgactggagaagactggaacgccgttatg
tacgatgggatcatggcgtatggaggcccttcctcttctgggatgattgtgtgtttttac
ttcatcatcctcttcatctgtggaaactatatccttctgaatgtcttcttggctatcgct
gtggacaacttggcagatgcagagtctctcaacacagacgaaggagacaagaaaggggac
aaaaaggaggatgaaaaagatgacaaggatgaagaagaggagattgacgacactgcagca
gaggaagaggatccagaagttccatctgggcctcggccggtcatctctgacctaataaag
aaggagaagattactcctatcccagagggaagcgccttcttcatctttagcaccacaaac
ccgtttcgtgtgttttgccacaaactcatcaaccaccacatattcaccaacctcatcctg
gtgttcatcatgctcagttctgtctcactcgctgctgaggatccgatccgaaacttctca
gctcgcaatattgtcctaggctatgcagattatgtcttcactagtatgtttacatttgag
atcatattgaagatgacaacatatggagcctttctacataaaggggcattctgtaggaat
tacttcaacctcctggacctgttggtggtgggagtttcccttgtctcttttggcattcag
tcctcggccatctctgtggtgaagattcttagggtcctgcgtgttctccgaccccttcgt
gcaatcaaccgggccaaaggcctaaagcacgtggtgcagtgtgtgtttgtggccatcaga
actatcggtaacatcatgatcgtcactaccctgctccagttcatgtttgcctgtataggt
gtgcagctatttaagggaaaattctatcgctgcacggatgaagccaagtccaactcagat
gagtgcaagggcacctacatcctgtataaggaaggagatgtgaaccagccaaccatccac
aaacgactgtggcacaacagcgacttcaacttcgataacgtcctcatggctatgatggct
ctgttcaccgtgtccacttttgaaggctggccttctttactgtacaaggcaatcgactcc
aacagggagaacctcggtcccatttacaactaccgcgtggagatttccatcttcttcatc
atctacatcatcatcattgctttcttcatgatgaacatctttgtaggttttgtgatcgtc
acatttcaggaacaaggagagaaagagtacaaaaactgtgaactcgacaagaaccagcgt
cagtgtgtggagtacgctcttaaggcacgtccgctgaggaggtacatccctaagaacccg
taccagtacaagttctggtatgtggtgaactcaactggctttgagtacatcatgtttgtg
ctcattatgctcaacacgctctgcctggctgtgcagcactacggacagtcagcgctcttc
aactatgtaatggacattcttaatatggtcttcactgctgtcttcactgtggaaatggtt
ctcaaactcatcgctttcaaacccaggcactatttcgctgatgcttggaacacatttgat
gccttaattgttgttggtagcgtcgtcgatattgctatcactgaagttaataaacttgta
gagccaacggagactcctcaggtggatgagcaggggaacacggaggacagcgctcgcatc
tccatcaccttctttcgtctgtttcgagtcatgcggctggtcaagctgcttagcagaggg
gagggcattcgcactctgctctggactttcatcaaatccttccaggctctgccatatgtt
gctcttctgatagccatgctgttcttcatctacgctgtcattggcatgcaggtgtttgga
aaggttgccatggtggacggcacgcacatcaacagaaacaacaactttcagaccttccct
caggctgtgctccttctcttcagatgtgccactggagaggcatggcaggagatcatgttg
gcctgtatgccagggaaactgtgtgaccccgagtctgattacaaccctggggaggagatg
acctgtggcagtggatttgcaataatttacttcatcaccttttacatgctctgcgccttt
ttgattataaatttgtttgtggccgtcatcatggacaactttgactatctcacacgtgat
tggtccattcttggtccacaccacctcgatgaattcaagagaatttggtcagagtacgac
ccggaggctaagggcagaattaaacatctggatgttgtgacacttcttcgtcgaatccag
cctcctctcggctttggcaaactgtgccctcacagagtggcttgcaagaggctggtagcc
atgaacatgcctctgaacagtgacggcacagtcatgtttaacgctactttgtttgcactg
gtgcgcactgccctgaagatcaaaacagaaggtaatctagagcaggccaacgaagagctg
cgagctgtcatcaagaaaatctggaagagaaccagcatgaagctgctcgatcaagtggtg
cctcctgctggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacag
gactactttaggaaattcaagaaacgtaaagaggaaggcctggtgggtgctcacccagcg
cagaacaacacagctatcgcattacaggctggccttcgcacgctgcatgatattgggccc
gaaattcgccgagcgatatcatgtgatctgcaagatgacgagctagtagactttattcca
gaggaagacgaggaaatttataggcgtaatggtggactctttggcaaccatctcatgaac
ggtggtcatcgtcgatccaacggccaccagaccaacgccacacagcgacctctgcaggtg
cagcctccacctcactacgcccacatggagcagccggttggacgtctgtctcgagccaat
gcaatgtcccaccccaacaaccaccatcaccaccacaaccaccatcaccaccgccaccac
aactcctatggaaagtcgcccaaatccaccaacatcaacctcaacaatgccaacgtgtcc
agtttacccaacggaggacaccatcgctactatgaacatgcacctcccaatggctaccca
ggtcttcgcagctcctactacgactacgacaagccccggacaccccaggctcaaagaagg
cgctactatgagacctatgttaggtcccacggagttgatggacaccaccctaccatccgc
agagaggaggagttagatgaagaccgcttctctggggagtattacagtggggaggagttt
tatgaagacgacagtatgctgtcaggggacaggtatgcaaacagtgacacggagtatgag
actcccaaaggttaccatcatcccgacagttactatgacgatgacgagcagcctctctac
cgtgactctcgaaggtcaccaaagagaaggttgcttcctgccacacctcaaggtatctta
tcccctgcagcatgtaacaggaggccatccttcaactttgagtgtctgcgcagacaaggt
agccaggacgagcttccacatcaacgtactgctctaccactgcaccttatgcagcaccag
gttatggctgtagcaggcctggactccagcagagcccaccgcctctccccaacccgctcc
acccgctcctgggccactcctcctgccactccggccagtaaagaccaatcaccatactac
acccctctcatccgtgtggaccgcccgcacagggagagtgctgctagcagccacgtgtct
ctgcgcaagagctcctggtacacagacgacccagagttctcccagaggatgtactcacct
gtccacctgcaggtgccacctgagtatcacaaccagtatcaccagaagagaggcagcgcc
accagccttgtggaagcggtgttgatatcagaagggcttgggagatatgccaaggatccc
aagtttgttgctgccacaaagcacgaaatagcagatgcgtgtgagatgacaatagatgag
atggagagtgcagccagccacctgctgaacggagggatggccccgagcatcaatggtgtc
aacgtgttcccccttctgacttcaagggactatgaactgcaggacactgcagccagctac
agcgacgaggagcctgagacagagccgagagctccttatgaggaagacctggcagatgag
atgatctgcatcactactttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (16)   
   RefSeq(pep) (16)   
DNA sequence (17)   
   RefSeq(nuc) (17)   
Protein domain (5)   
   Pfam (5)   
All databases (52)   

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