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KEGG   Etheostoma cragini (Arkansas darter): 117946952
Entry
117946952         CDS       T07493                                 
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03320  PPAR signaling pathway
ecra04148  Efferocytosis
ecra04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    117946952 (rxrbb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecra03000]
    117946952 (rxrbb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ecra03310]
    117946952 (rxrbb)
Transcription factors [BR:ecra03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    117946952 (rxrbb)
Nuclear receptors [BR:ecra03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   117946952 (rxrbb)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 117946952
NCBI-ProteinID: XP_034731367
Position
6:14799212..14807626
AA seq 444 aa
MSSQQPNSSASNSPTSILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPAHSPGIMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVSNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIGLKDGVLLASEL
QRDNAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKAELGCLRAIVLFNP
DAKGLSNTGEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtcctcacagcagcccaacagttcagcctccaacagccccaccagcatcttgggttct
cctttctcagttatcagtccctcacttaactccccagtggtctcaccctctctgggattt
ggacccatcagcaacagtcagatctcttcttcagcacctatatcagggatgcactcaatc
agcagctcagaagatatcaagcctccatttggcctgaggcccatgccagctcacagccct
ggaataatgttgtctcagaaacgcatgtgtgtcatctgtggagaccgctcttctggcaag
cactatggagtgtacagctgtgagggttgcaaaggtttcttcaaacgaactgtgcgcaaa
gaccttagctatacctgcagggataacaaagagtgcctggtcgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagaggaaccgagagcgtgaaggagagcttgagttcagtgttggcgtgaatgag
gagatgcctgtggagaagattttagaggcagagacggctgtggagcagaagactgaactt
cactctgatggcggttctgctggcaactctccccatgatgcagttagcaacatctgtcag
actgcagacaaacagctgtttgccttggtggagtgggcaaagagaatccctcacttctct
gaactgcccctcgatgaccaggtcatcctcctgcgtgcaggctggaatgagctccttatt
gcttcgttctcccatcgctccattggtttgaaggatggagttctcctagcctctgagctg
cagcgtgacaatgcacacagcgcaggagttggagccatttttgatagggagagtgtgcag
agcgcagaggtcggtgccatatttgacagggtccttacagaactcgtcaacaaaatgaga
gatatgcaaatggacaaagcagagctgggctgcctccgagccattgtcctcttcaaccca
gatgctaaaggtctttccaacaccggtgaggtggagctccttagagaaaaggtctatgca
tcgttggaagcctactgcaaacagaaatacccagagcagcagggaaggtttgctaagctc
cttcttcgactgccagcactgcgatctattggcttgaagtgcttggagcatcttttcttc
ttcaagcttattggtgacacacctattgacactttcctcatggaaatgcttgaagctccc
catcagttgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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