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KEGG   Dryobates pubescens (Downy woodpecker): 104308089
Entry
104308089         CDS       T08526                                 
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dpub04040]
    104308089
Ion channels [BR:dpub04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   104308089
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel IQ GPHH
Other DBs
NCBI-GeneID: 104308089
NCBI-ProteinID: XP_009907518
Position
Unknown
AA seq 1190 aa
VFTGIFTAEMVLKLIALDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMDCVCKISA
DCSLPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLN
LFLALLLSSFSADSLAASDDDGEMNNLQIAIGRISRGVGFLQASLLALLRGQGRGRPGAX
EPGKSDGSALNHLDGGPAAKAERRDGAAGKEQLFRDELDHMNFIHNPNLTLQVPIASEES
DLYEESDLYEETSAQSDTEDTKNPLSSDNASSLCSTVDYKPPQPEEEEMAQEAEESNEPE
ECFTEGCVKRFPCLHVDISSERGRVWWTLRRTCFRIVEHDWFETFIVFMILLSSGALAFE
DIYIEQQKVIRTILEYADKVFSYVFVLEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLIS
LTANWLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFW
LIFSIMGVNLFAGKYYRCVNTTTGELFPISEVNNKSDCMALLHTSQVRWLNVKVNFDNVG
LGYLSLLQVATFKGWMDIMYAAVDSREIEEQPSYEINLYMYIYFVIFIIFGAFFTLNLFI
GVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVFDFVT
KQVFDITIMILICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYF
FTVGWNIFDFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTL
LFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQ
ITTSAGWDGLLSPILNSGPPDCDPHLEHPGSPLRGDCGNPSVGIFFFCSYIIISFLIVVN
MYIAIILENFSVATEESGEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPL
KIPKPNKIKLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPS
KVSYEPITTTLKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHGAAKDAPGEGAPEKA
GLLATKMQQMYGNSGAGAQGAAPALGLTPMPGSETPEPGTRERVVKESLV
NT seq 3573 nt   +upstreamnt  +downstreamnt
gtcttcacagggatcttcacagcagagatggtcctgaagctcattgccctggacccctat
gagtacttccagcagggctggaacgtctttgacagcatcatcgtcaccctcagcctggtg
gagctggggctggccaacgtgcaaggcctctccgtgctgcgctccttccgcctgctgagg
gttttcaagctggccaagtcctggcccacgctcaacatgctgatcaagatcatcgggaac
tcggtgggggcgctggggaacctcaccctggtgctggccatcatcgtcttcatcttcgcc
gtggtggggatgcagctcttcggcaagagctacatggactgcgtctgcaagatctcagcg
gactgcagcctgccccgctggcacatgaacgacttcttccactccttcctcatcgtcttc
cgcatcctctgcggcgagtggatcgagaccatgtgggactgcatggaggtggccggccag
accatgtgcctcatcgtcttcatgatggtcatggtcatcggcaacctggtggtgctgaac
ctgttcttggctctgctgctgagctccttcagcgccgacagcctggcggcctcggacgac
gacggggagatgaacaacctgcagatcgccatcggcaggatcagcaggggcgtcggcttc
ctccaggcctccctgctggcgctgctccgcgggcagggcaggggccggccgggggccnng
gagccgggcaagagcgacggctcggcgctgaaccacctggacggcggcccggcggccaag
gcggagcgccgggacggggccgccggcaaggagcagctcttcagggacgagctggaccac
atgaacttcatccacaaccccaacctcaccctgcaggtgcccatcgcctccgaggagtcc
gacctctacgaggagtccgacctctacgaggagaccagcgcccagtccgacaccgaggac
accaagaatcccctctccagtgacaatgcctcctccctgtgcagcaccgtggactacaaa
cccccacagccggaggaggaggagatggcacaggaggctgaggagagcaacgagcctgag
gagtgcttcactgaaggctgtgtgaagaggttcccctgcctccatgtggacatcagcagc
gagagggggagggtctggtggaccctgcgccgcacctgcttccgcatcgtggagcacgac
tggttcgagaccttcatcgtcttcatgatcctcctcagcagcggggccctggcctttgag
gacatctacatcgagcagcagaaggtgatccgcaccatcctggagtacgccgacaaggtc
ttctcctacgtcttcgtgctggagatgctgctcaagtgggtggcctatggcttcaaggtc
tacttcaccaatgcctggtgctggctggacttcctcattgttgatgtctccctgatcagc
ctgacagccaactggttggggtactccgagctgggagccatcaagtccctgcggaccctg
cgggcgctgcgccccctgcgcgccctctccagattcgaaggcatgagggtggtggtgaac
gccttgctgggtgccatcccctccatcatgaacgtgctgctggtgtgcctgatcttctgg
ctgatcttcagcatcatgggggtgaacctgtttgcagggaagtactaccgctgcgtcaac
accaccaccggcgagctcttccccatcagcgaggtcaacaacaagagcgactgcatggcc
ctgctgcacaccagccaggtcaggtggctcaatgtcaaggtcaacttcgacaacgtgggc
ctgggatacctctccctgctgcaggtggcaaccttcaagggctggatggacatcatgtat
gcagctgtggactcccgggagattgaggagcagccttcctacgagatcaacctctacatg
tacatctacttcgtcatcttcatcatcttcggcgccttcttcaccctgaacctcttcatc
ggggtcatcatcgacaacttcaaccagcagaagaaaaagtttggaggcaaagacatcttc
atgacagaggagcagaagaaatactacaatgccatgaagaagcttggctccaagaaaccc
cagaagcccatccccaggccccagaacaaggtccaagggatggtgttcgactttgtcacc
aagcaagtgttcgacatcaccatcatgatcctcatctgcctgaacatggtgaccatgatg
gtggaaacagatgaccagagtgagctcaagacatctgtcctctacaagatcaacttggtc
ttcatcgtcatcttcaccggggagtgtgtgctcaagatgtttgccctgcgccactacttc
ttcaccgtcggctggaacatcttcgacttcgtggtggtcatcctctccatcctaggtatc
gtcctctcggacatcatcgagaagtacttcgtgtcccccacgctgttcagggtgatccgg
ctggccaggatcggccgcgtgctgcggctgatccgcggggccaagggcatccgcacgctg
ctcttcgccctgatgatgtccctgcctgccctgttcaacatcggcctgctgctcttcctg
gtgatgttcatctactccatcttcggcatgtccaacttcgcctacgtcaagcacgaggcc
ggcatcgacgacatgttcaacttcgagaccttcggcaacagcatgatctgcctcttccag
atcaccacctcggccggctgggacgggctgctcagccccatcctcaacagcgggcccccc
gactgcgacccccacctggagcaccccggcagccccctgcggggcgactgcggcaacccc
tcggtgggcatcttcttcttctgcagctacatcatcatctccttcctgatcgtggtcaac
atgtacatcgccatcatcctggagaacttcagcgtggccacggaggagagcggcgagccc
ctctgcgaggacgacttcgagatgttctacgagacctgggagaagttcgaccccgacgcc
acccagttcatcgcctacagcaccctctccgacttcgtggacaccctgcaggagcccctc
aagatccccaagcccaacaagatcaagctgatcaccatggacctccccatggtggccggg
gacaagatccactgcctggacatcctcttcgccctgacgaaggaggtgctgggcgactcg
ggggagatggacgccttgaaggccaccatggaggagaagttcatggcggccaacccttcc
aaggtgtcctacgagcccatcaccaccaccctgaagaggaagcacgaggaggtctgcgcc
accaagatccagagggccttccggaggtacctgctgcggcgctcggtgaagcaggcctcc
tacatgtaccggcacggcgcggccaaggacgcccccggggagggcgccccggagaaggcg
gggctgctggccaccaaaatgcagcagatgtatgggaacagcggggcaggggctcagggg
gctgcccccgccctgggcctcacccccatgcccggctcagagacgccggagccagggacg
agggagcgcgtggtcaaggagtcgctggtgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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