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KEGG   Dryobates pubescens (Downy woodpecker): 104306479
Entry
104306479         CDS       T08526                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03320  PPAR signaling pathway
dpub04148  Efferocytosis
dpub04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104306479 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dpub03000]
    104306479 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:dpub03310]
    104306479 (RXRA)
Transcription factors [BR:dpub03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    104306479 (RXRA)
Nuclear receptors [BR:dpub03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   104306479 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3 CRT10
Other DBs
NCBI-GeneID: 104306479
NCBI-ProteinID: XP_009905748
Position
Unknown
AA seq 439 aa
MAAPSLHPPLGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
SLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggccgccccctccctgcacccccccctcgggccgggcatcggctcctcgctgggctcc
ccgggccagctccactcgcccatcagcaccctcagctcgcccatcaacggcatgggaccc
cccttctccgtcatcagctcccccatgggcccccactcgatgtctgtcccctccaccccc
agcctgggattcggcaccagcagcccgcagctcaactcacccatgaaccctgtcagcagc
tcagaagacatcaagccacccctaggactcaatggagtcctcaaagtgccagcacatccc
tcaggaacgatggcctccttcaccaagcacatatgtgccatctgtggggacagatcttca
ggtaaacactacggggtgtacagctgcgagggctgcaagggcttcttcaagcgcacggtg
cggaaggacctgacctacacgtgccgcgacaacaaggactgcctgatcgacaagcgccag
cgcaaccgctgccagtactgccgctaccagaagtgtcttgccatgggcatgaagagggaa
gctgtccaagaggagaggcagaggggaaaggaccgcaacgagaacgaggtggagtccaca
agtagtgccaacgaggacatgcctgtggagaagatcttggaagctgaacttgcagtggag
ccaaagacagagacatacattgaagcaaacatgggcttgacgccgagctcgcccaatgac
ccagtgacaaacatctgccaggcagcagacaaacagctcttcaccctggtggagtgggcc
aagaggatccctcatttctccgagctgcccctggatgaccaggtcatcttgctcagagca
gggtggaatgagctcctaattgcctccttctcccaccgctccatagctgtgaaagatgga
atcctcttggccaccgggctccacgtgcaccggaacagcgcccacagcgcgggtgtcggg
gccatcttcgacagagtactgacagaactggtgtccaaaatgcgagacatgcagatggac
aagacagagctcggctgcctgcgagccattgtcctcttcaaccctgactccaaaggtctc
tccaacccagctgaggtggaggctctgcgggagaaggtctacgcttcgctagaggcatac
tgcaaacacaaataccctgaccagcctggcaggttcgccaagctgctgctgcgcctccca
gccctgcggtccatcggcctgaaatgcctggagcacctcttcttcttcaagctaataggt
gacacgcccatcgacaccttcttgatggaaatgctggaagcacctcaccaaatgacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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