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KEGG   Dendronephthya gigantea (soft corals): 114519180
Entry
114519180         CDS       T06112                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
dgt  Dendronephthya gigantea (soft corals)
Pathway
dgt04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dgt00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    114519180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dgt03000]
    114519180
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:dgt03310]
    114519180
Transcription factors [BR:dgt03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    114519180
Nuclear receptors [BR:dgt03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   114519180
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 114519180
NCBI-ProteinID: XP_028395065
Position
Unknown
AA seq 573 aa
MTDTTNTQPTELGDEIPAYAPSVVTPVTTLTQHFYHPRPMIPGSALAFPVNIQGQPLLFQ
SPYYTPFHYSPLINNGPIPFQKATFPYHESVIHSTTSEPARVDDQDGPSPAKKPMPVIIT
KDENSSPTDCPITSHINMTGSLASNTTTSGGHFNFSDAPMVLINQPKVEVTDQNSQEHTP
CLAMTSSHTRQMNVVMSPSSSPLTQSKMHSPTSNEFVSPSTSTSSEPNEQNSDNQPTVCV
ICGDKATGNHYGVTSCEGCKGFFKRTVQNKKVYTCRNLSKDCPIDKRHRNRCQFCRYQKC
LNAGMLKEAVREDRTPGGKHKNANLLKIKLPSLEDSPSRIQSSHWSSPLIEKFLLIRNMA
IPPLNKNSVSDDVKIQTINYVVQLADWQVEEVLGWFEKLEFLANINLEDRKVLVLNSIME
ILAFGLARRSMDINGSLLLGEGVLLDMETATIAGIEEITQRILQLSSKLKELRLVEEEYV
CLTIIVLLNPDIRGLNNQELIEKLQDQVHTSMQEFITHRYPGQPNRFGNVLLRLPELRSI
STKITERLFLLSVTLGNDLGINKRLNDLLYISK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgactgacactacgaatacacaacctactgagttaggtgatgaaatccctgcttatgca
ccttccgttgtgacacctgttaccacactcacacaacacttctaccatcctcgacccatg
ataccaggatcagcgctggcatttccagtgaatatacaaggccaaccactactatttcaa
tctccatattatacgccattccattactccccacttataaacaatggtccaataccattt
caaaaagcaacatttccataccatgaatctgttatacactcaacaacatctgaaccagca
agagttgatgatcaagatggcccaagtcctgctaagaaaccaatgccagttattataacc
aaagatgagaattcatcaccaactgattgccccataacatcacatataaatatgacaggc
tccttggcaagtaacaccactacttcagggggtcactttaacttttcagacgccccaatg
gttcttataaatcaaccaaaagttgaagtgacagaccaaaactctcaggaacatacacca
tgcttagcaatgacttcaagtcacacaagacaaatgaatgttgtaatgtctccaagttca
tcaccactaacacagtccaaaatgcactccccgacatctaatgagtttgtaagcccgagt
acatcaacctccagcgaaccaaacgagcaaaacagcgataatcaaccaaccgtttgcgtg
atttgtggggataaagcaacaggcaatcattatggggtgactagttgtgaaggatgcaag
ggttttttcaaacgaactgttcaaaacaaaaaggtgtacacgtgtaggaatttatcgaaa
gattgtccgatcgataaaagacaccgaaatcgttgccagttctgtcgctatcagaaatgc
cttaatgctggtatgcttaaggaagctgttcgcgaagacagaacgcctggtggtaaacac
aagaatgcaaacttgttgaaaatcaaacttccttctttggaagacagtcccagtcgaatt
cagtcctcccactggtcctcgccgcttatcgaaaaattcttactgatcagaaacatggca
atccccccgcttaacaaaaactctgtcagtgacgacgtgaaaatacaaactattaactat
gtcgtgcaacttgctgactggcaggtggaggaagttttgggttggtttgagaaacttgaa
tttctggccaacatcaacttggaggatcgaaaagttttggtgttgaattcaattatggag
atcttagcattcggactcgcgcgacggtcaatggatatcaatggtagtctgttattggga
gaaggagtgcttttagacatggagactgcaacaatagctggcattgaggaaattacgcaa
agaatcttgcaactatcgtcgaagttaaaagaattgagactggtagaagaggaatatgtg
tgtttgacgatcattgtgttgttgaatccagacatcagaggtttaaataatcaagagctt
atcgagaaactacaagatcaggtacacacgagcatgcaagagttcatcacacatcgttat
ccaggccaacctaatagatttggtaacgttttattacgtttgcctgagctgcgctcgatc
agtacgaaaattacggagcgtctgttcctcttaagtgttacacttggaaatgatttaggg
attaataagcgcctgaacgacttattgtatatctcgaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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