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KEGG   Capricornis sumatraensis (Sumatran serow): 138087086
Entry
138087086         CDS       T10522                                 
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
  KO
K06238  collagen type VI alpha
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Pathway
csum04151  PI3K-Akt signaling pathway
csum04510  Focal adhesion
csum04512  ECM-receptor interaction
csum04820  Cytoskeleton in muscle cells
csum04974  Protein digestion and absorption
csum05165  Human papillomavirus infection
Brite
Exosome [BR:csum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138087086 (COL6A1)
Glycosaminoglycan binding proteins [BR:csum00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138087086 (COL6A1)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   138087086 (COL6A1)
SSDB
Other DBs
NCBI-GeneID: 138087086
NCBI-ProteinID: XP_068838021
Position
1:251696671..251717554
AA seq 1027 aa
MRLPRALLPLLLQACWASAQDDPVASRAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKSFTKRFIDNLKDRYYRCDRNLVWNAGALHYSDEVEIIRGLTRMPSGRDALKSSVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLVVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSRDTEEVISQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM
KGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGESGYPGLPGCKGSPGFDGVQGPPGP
KGDAGAFGLKGEKGEPGADGEPGRPGSTGPPGDEGEPGQPGPPGEKGEAGDEGNAGPDGA
PGERGGPGERGPRGTPGARGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGD
EGPPGTEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNNDIAPRGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIVKVIDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPSIRNAQDLKEAIKKLQWMGGGTFTGEALQYTRSRLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDVFGLAAGSDQLNVISCQGLAPQ
GRPGISLVKENYAELLDDGFLKNITAQICIDKKCPDYTCPITFSSPADITILLDGSASVG
SHNFDITKRFAKRLAERFLTASRTDPGQDVRVAVVQYSGTGQQRPERAALQFLQNYTVLA
NTVDSMGFFNDATDVMDALGYVTRFYREASPGAAKKRLLLFSDGNSQGATPAAIEKAVQE
AQRAGVEIFAVVVGRQVNEPHVRVLVTGKAAEYDVVFGERHLFRVPSYQALLRGVFYQTV
SRKVALD
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgaggctgccccgcgctctgctgcccctgctgctgcaggcctgctgggcctccgcgcag
gacgaccccgtggcctcgagggccatcgccttccaggactgccctgtggacctattcttt
gtgctggacacctccgagagcgtggccttgaggctgaagccctatggggccctggtggac
aaggtcaagtccttcaccaagcgcttcattgacaacctgaaggacaggtactaccgctgt
gaccgcaacctggtgtggaatgcgggcgcgctgcactacagcgacgaggtggagatcatc
cgcgggctcacgcgcatgcctagcggccgcgacgcgctcaagagcagcgtggacgccgtc
aagtacttcggcaagggcacctacaccgactgcgccatcaagaagggtctggaagagctg
ctcgtggggggctcccacctgaaggagaataagtacctggtcgtggtgactgacgggcac
cccctggagggctacaaggagccctgcgggggcctggaggacgctgtgaacgaggccaag
catctgggcatcaaagtcttctccgtggccatcacgcctgaccacctggagccacgtctg
agcatcatcgccacggaccacacgtaccggcgcaacttcacagcagctgactgggggcag
agccgtgacacggaggaagtcatcagccagaccatcgacaccatcacggatatgatcaaa
aataatgtggagcaagtgtgctgctctttcgagtgccagcccgccagaggaccccccggg
cctcgaggcgaccccgggtacgagggagaaagagggaagcccgggctcccgggagagaaa
ggagaagctggagaccctggaagacctggggaccttggacccgtcggctaccagggcatg
aagggagaaaaagggagccgaggagagaagggctccaggggacccaaaggctacaaggga
gagaagggaaagcgtggcatggacggcgtggatggcatgaagggggagtcagggtaccct
ggcctgccaggctgcaagggctcgcccggattcgatggtgtccaaggaccccccgggccc
aagggcgatgcaggtgccttcggactgaaaggagagaagggtgagcccggagcagacggg
gagcctgggaggccagggagcacggggccccctggagatgagggtgagcccggacagcct
ggtcccccaggagagaagggagaagccggcgatgagggaaatgcaggaccagacggagcc
cccggagaaaggggcggtcctggggaaagaggacctcgagggaccccaggtgcgcggggc
ccaagaggagacccgggtgaagctggaccccaaggtgaccagggacgagaaggccccgtc
ggtgtccccggtgacccgggcgaggctggccccattgggccaaaaggataccgaggtgat
gagggacccccagggaccgagggtcccagaggagctccagggcctgcaggcccccccgga
gaccccgggctgatgggtgagaggggtgaagacggcccccccgggaatggcactgaaggc
ttccccggctttcccggctatccaggcagcagaggtcctcctgggataaatggcaccaaa
ggctaccctggcctcaagggggacgagggagaagccggggaccccggagaggacaataat
gacattgctccacgaggcgccaaaggagcaaagggctaccgaggtcccgaaggcccccag
ggacccccaggacatgtgggacctccggggccagacgaatgcgagattttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgcgggcccatcgacatcctcttcgtgctg
gacagctccgagagcatcggcctacagaacttcgagatcgccaaggacttcatcgtcaag
gtcattgaccgactgagcagggacgagctggtcaagtttgagcctgggcagtcgcacgcg
ggcgtggtgcagtacagccacaaccagatgcaggagcatgtggacctgagggaccccagc
atcaggaatgcccaggacctcaaggaggccatcaagaagttgcagtggatgggtgggggc
accttcacgggcgaggccctgcagtacacccggagccggctgctgccgcccacccagaac
aaccgcatcgccctggtcatcaccgacggccgctcggacacccagagggacaccacccca
ctcagcgtgctctgcggccctgacatccaggtggtctctgtgggcatcaaggatgtcttt
ggcttggctgcgggctccgaccagctcaatgtcatctcctgccaaggcctggcaccccag
ggacggccgggcatctcactggtcaaggaaaactacgccgagctactggacgacggcttc
ctgaagaacatcaccgcccagatctgcatagacaagaaatgtccagattacacctgccca
atcaccttctcctccccggccgacatcaccatcctcctggacggctccgccagcgtgggc
agccacaactttgacatcaccaaacgctttgccaagcggctggcagaacgcttcctgaca
gcgagccggacagaccccggccaggacgtgcgcgtggcagtggtgcagtacagtggcacg
gggcagcagcggccggagcgcgcggccctgcagttcctgcagaactacactgtgctggcc
aacaccgtggactccatgggcttcttcaacgacgccaccgacgtcatggacgccctgggc
tacgtgacccgcttctaccgcgaggcctcacccggcgccgccaagaagaggctgctgctc
ttctcggatggcaactcgcagggcgccacgccagctgccatcgagaaggcggtgcaggag
gcccagcgggcaggcgtggagatcttcgcggtggtggtgggccgccaggtgaacgagccc
cacgtgcgtgtcctggtcactggcaaggcggctgagtatgacgtggtcttcggtgagcgc
cacctgttccgtgtgcccagctaccaggcgctgctgcggggtgtcttctaccagacggtg
tccaggaaggtggcgctggactag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
All databases (4)   

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