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KEGG   Colius striatus (speckled mousebird): 104558397
Entry
104558397         CDS       T08355                                 
Name
(RefSeq) retinoic acid receptor RXR-alpha
  KO
K08524  retinoid X receptor alpha
Organism
csti  Colius striatus (speckled mousebird)
Pathway
csti03320  PPAR signaling pathway
csti04148  Efferocytosis
csti04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:csti00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    104558397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csti03000]
    104558397
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:csti03310]
    104558397
Transcription factors [BR:csti03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    104558397
Nuclear receptors [BR:csti03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   104558397
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 104558397
NCBI-ProteinID: XP_010201267
Position
Unknown
AA seq 365 aa
MNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKG
FFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNE
NEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLF
TLVEWAKRIPRFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSA
HSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVY
ASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEA
PHQMT
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaaccccgtcagcagctcagaagacattaagccacccctggggctcaatggagtcctc
aaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgtgccatc
tgtggggacagatcttcaggtaaacattacggggtgtacagctgtgagggctgcaaaggc
ttcttcaagcgcacggtgcgcaaggacctgacgtacacgtgccgggacaacaaggactgt
ctgatcgacaagcgccagcgcaaccgctgccagtactgccgctaccagaagtgtctggcc
atgggcatgaaacgagaagctgtccaggaggagaggcagagggggaaggaccgcaatgag
aacgaggtggagtcaacaagtagcgccaacgaggacatgcccgtggagaagatcttggaa
gctgaacttgcagtggagccaaagacagagacttacatcgaagcaaacatgggcctgaca
cccagctcgcccaacgaccccgtgacgaacatctgccaggcagcagacaaacagctcttc
accctggtggagtgggccaagaggatcccccgcttctccgagctgcccctggatgaccag
gtcatcttgctcagagcaggctggaatgagctcctaattgcctccttctcccaccgctcc
atagccgtgaaagacgggatcctgttagccacagggctgcacgtgcaccggaacagcgcc
cacagcgcgggcgtcggggccatcttcgacagagtactgacagaactcgtgtcaaaaatg
cgagacatgcagatggacaagacagagctcggctgcctgcgagccatcgtcctcttcaac
cctgactcgaagggcctgtccaacccggcggaggtggaggcgttacgggagaaggtgtac
gcgtcgctagaggcatactgcaaacacaagtaccctgaccagccagggaggtttgcaaag
ctcttgctgcgtctcccagccctgcggtccatcggcttgaaatgcctggagcacctcttc
ttcttcaagctaataggagacacgccaatcgacaccttcttgatggaaatgctggaagca
cctcatcaaatgacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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