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KEGG   Cololabis saira (Pacific saury): 133429496
Entry
133429496         CDS       T09849                                 
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03320  PPAR signaling pathway
csai04148  Efferocytosis
csai04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:csai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    133429496 (rxrbb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csai03000]
    133429496 (rxrbb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:csai03310]
    133429496 (rxrbb)
Transcription factors [BR:csai03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    133429496 (rxrbb)
Nuclear receptors [BR:csai03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   133429496 (rxrbb)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 133429496
NCBI-ProteinID: XP_061572620
Position
3:23085293..23097374
AA seq 425 aa
MSSQQPNSSASNSPTSILGSPFSVISPSLNSPGISPSLGFGPISSSQISSSGPISGMHSV
SSSEDIKPPFGLRSMSHSPGIMTSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRKD
LSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRNREREGELDFGVGVN
DEMPVEKILEAETAVEQKTELHSDGGSGGNSPHDAVSNMCQTADKQLFALVEWAKRIPHF
SELPLDDQVILLRAGWNELLIASFSHRSIPLKDGVLLTSELQRDSLHTAGVGAIFDRESV
QSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAKGLSNTSEVELLREKVY
ASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEA
PHQLS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtcctcacagcagcccaacagctcagcttccaacagccctaccagcatcttgggttct
ccattttcagtcatcagcccctctcttaactcgccagggatctctccctctttgggattt
ggacccatcagcagcagtcagatctcttcttcaggaccaatatcagggatgcattcagtc
agcagctcagaagatatcaagcctccatttggcctgaggtccatgtcacacagcccggga
ataatgacatctcagaaacgactgtgtgtgatctgtggagaccgctcctctggaaaacat
tacggagtgtacagctgtgagggttgcaaaggtttttttaagcgaactgtgcgcaaagac
ctaagctacacctgcagggacaacaaagagtgcctggtcgacaaacgccagcgcaatcgc
tgccagtactgccgctaccagaagtgcctggccatgggtatgaagagggaagcagtccag
gaggagcgccagaggaaccgagagcgtgagggagagctggattttggtgttggggtgaat
gacgagatgcctgtggagaagatcttggaggcagagacggctgtggagcagaagactgag
cttcactctgatggaggctccgggggaaactcgccccatgatgctgtttccaacatgtgt
cagactgcagacaaacagttgtttgctttggtggagtgggcaaagaggatccctcatttc
tctgaactgccccttgacgaccaggtcatccttctgcgtgcagggtggaatgagcttttg
attgcatcgttctcccatcgatccattcctctgaaggatggagttcttctgacgtctgag
ctgcagcgcgacagtttacacactgctggagtcggagccatttttgacagagagagtgtg
cagagtgcagaagttggtgccatatttgacagggttctgactgagctcgtcaataaaatg
agagatatgcaaatggacaaaacagaactgggctgcctccgcgctatcgtcctgttcaac
ccagatgccaaaggtctctctaacacaagtgaggttgagctccttcgagaaaaggtctat
gcatcattggaatcttactgtaaacagaagtatccagagcagcaaggaaggtttgctaaa
ctcctcctccgactgccagcactgcgatccatcggcttgaagtgcttggagcacctgttt
ttcttcaagctgatcggtgacacacccattgacactttcctcatggaaatgcttgaagcc
ccccatcagttgtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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