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KEGG   Crocodylus porosus (Australian saltwater crocodile): 109322648
Entry
109322648         CDS       T07440                                 
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
  KO
K06238  collagen type VI alpha
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510  Focal adhesion
cpoo04512  ECM-receptor interaction
cpoo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109322648 (COL6A3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109322648 (COL6A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpoo04147]
    109322648 (COL6A3)
   00536 Glycosaminoglycan binding proteins [BR:cpoo00536]
    109322648 (COL6A3)
Exosome [BR:cpoo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109322648 (COL6A3)
Glycosaminoglycan binding proteins [BR:cpoo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109322648 (COL6A3)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   109322648 (COL6A3)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI VWA_3 fn3 DUF6559
Other DBs
NCBI-GeneID: 109322648
NCBI-ProteinID: XP_019409259
Position
Unknown
AA seq 3206 aa
MRKHRHLPIVAIISIILSGCCMVEAQQQEDVKIVAAADIIFLVDSSWSIGKEHFQLVREF
LYDVVKSLDVGENDFHFALVQFSGNPHTEFQLNTYRSTQDVLSHILNMPYMGGGTKTGKG
LEYLIQNHLTKAAGSRASDGTPQIIIVLTDGRSQDDVALPSSVLKSADINMFAIGVQNAV
EGELKEIASEPLDLHIFNLENFTALHNIVGDLVASVRTSMTPEMAGEKGVVKDITAQDSA
DLIFLIDGSNNIGSVNFQAIRDFLVNLVENLRVGAQQIHIGVVQYSDEPRTEFFLNTYST
KADVLDAVKALSFLGGEEANTGAALEFVVQNHFTQAGGSRIEEAVPQILVLISGGESSDD
VREGVLAVKQASIFSLSIGVLNADSTELQQIATDGSFAFSALDIRNLDGLQEQLLPNIVG
VAQRLILLEAPTIVTEVIDVNKKDIVFLIDGTTAMGSTHFSAVRDFIAKIVQRLEIGPDL
IQVAVAQYADTVRPEFHFNAHQSKKEVSSAVRKIKLMGGSTLNTGSALDFVRNNFFISST
GCRIDEGVLPMLVLVTNGKSKDGITQPAAEMKRSRIMVLTIGSKNADKLELQEIAYEPEL
VFTADEFRVQSLQGILPRVLTPLKTLSGAIIIQEIPSVQVNKRDIIFLLDGSLNVGNANF
PFVRDFVLKLVNYLDVGIDNIRIGLIQFSDTPRTEFFLNTYLTKSDIINRLGQLKPKGGS
VLNTGSALDFVLLKHFTEAGGSRIDEQVPQILVLVTAGQSADAYLDASNALARAGVLTFC
VGVRNADKAELEQIAFNPRMVYFTDDFSSLAALPQELIKPLTTYVSGGVQEVPLTPSESK
KDILFMIDGSANLLGHFPTVRDFVYRIISDLNVSPDAIRVAVAQFSDNVQVEFNFSELPS
KQDMLLKVKRMKIKTGKQLNIGSALDYAVRNLLVKNAGSRIEEGVPQFLVLLAAGKSTDS
VEDAAEALKRAGVVTFIIKARTAEQVELERIVYAPQFILPVDALSKIGEIQSNIVNLLRT
IQYQPTVVGDEKKDVVFLIDGSDGARRGFPFLQGFVLEMVENLDIGRDRVHVAVAQYSNV
IRPEFLFNSYYDKADVVRAIQGMSVMGGSPLNTGAALDYLIKQIFTAQSGSRIAENVPQF
LILLTADRSRDDVRRPSVVLKTTGAVPFGIGIGNADITEMQTISFIPDFAAVVPDFNQLN
TVQQLISDRVTRLTKKEIETLAPDLLFPSPSPAKKDVVFLIDGSQFASPEFQLIRDFILR
VVDSFDIGFDTTRVAVVQFSTDPKVEFLLNTHSTKDDVQTAVRRLRPKGGREVNVGDALE
YVAKNIFTRPSGSRIEDGVPQFLILLSSRKSDDEVVAPAVQVKQVGVAPLIIAKNVDPEE
LAQISLSPEYVYQVTNFQELPSIEQKLLTPLTSLTAGDIKGILGDVSLPPEGDGDERDIV
FLIDSSDSVRTDGLAHIRDFIIRIVQQLNVGANKVRIGVIQFSNDVFPEFYLKTHKSKTA
VLQAIRRLRFRGGSPLNAGKALDYVVKNYFIKSAGSRREDGVPQHLVLFLGERSQDDVNQ
PSSVINIAGIKSQGVGARNADRTQLERITNDPRLVFTVRDFLDLPSIESRFLQPILQSQI
QTTEAPEFIDMDGKKQADIVFLLDGSINLGRDNFQEVIQFISSIVDAIYDDTASIQVGLA
QYNSDVTDEFFLKDHATKQEILDAINKVAYKGGRVVNTGAAIKHLQAKHFVKEAGSRADQ
RIPQIAFIVTGGRPADDGQTAALALKQSGVKLFAVGVKNIDLDEVNKLSSEPATGFRVKA
AQELSELNEQILVTMDAVMKEKLCPGVTDISRDCKLDVILGFDVSDTAPGQSILYSQKGL
ESNVEAILNRITQMQRISCTGNQRPTIRVAIMGQSTTGAIEGLDFIEYEPELFEKFQAML
NRGPYYLTADTLKSYQNKFRTAPGDSVKVVIHLTDGADDGMNRLVAASAALQKEGVKALI
FVGLERVQNLEDLMQIEFGRGFTYNRPLRVNLLDLDYELAEQLGNIAERYCCGIPCKCSG
QRGDKGMLGPIGPKGVPGENGYRGYPGDEGGPGDRGPPGVNGTQGFQGCPGQRGIKGSRG
FPGEKGELGEMGLDGIDGEDGNKGLPGFSGEKGNPGQRGYKGFKGGKGERGDRGLRGDPG
ENGVDNTQRGPRGSKGEIGPMGDPGVDGAPGSLGGPGKNGVVGRRGPPGPKGPKGTPGQA
GQAGEQGRRGVQGPPGQLGTPGMRGEQGLPGPRGSGGAAGPPGERGRTGPFGRKGEPGDS
GPPGPNGFPGQRGETGEDGQSATGASGPKGKKGERGFPGPTGQKGASGDRGGPGGLGLKG
NRGRRGNAGEPGDPGQPGDYGYAGSPGLRGDRGEARDECALVRNIKDKCPCCYGPKECPV
YPTELAFAIDTSQGVNRDVFNRMKQAVLKVVNNLTIAESNCPRGARVALVTYNNEVTTEI
RFADSRKKSSLIQQLENLQPIQTTKQRSLETAMAFVARNTFKRSRSGFLMKKVAVFFSNG
PTRSSSQLTDAVLKLYDAGVWPVFLTNRDDSVLVNALKINNTAVGHATVLPTGGDQLNRT
IQRLLRCHICLDTCDPDTDCEPVVRRTGVRDKRAASTDVDTDMAFIIDSSESTTPLQFSE
IKKYISYIVRHMVISSDPKASQHHARVAVLQHAPYEYETNTSSSPVKVVMSLTDYGSKDK
ITNFIQNQMTQLHGTRALGSAIEYTIAQVFESAPNPRDLKVIVLMMTGKVKKEELEYLQR
VVVHAKCKGYAFVVMGIGKRVNVKNIYSLASEPNDVFFKLVDKPSELQEDSLLRFGRLLP
SFISSENAFYLSPDVRKQCDWFQGDQPAKNPTKFGQKTMYFATNVTKNTSVGTSTGTSAR
TKTSDSNTMAVTSASTIAHTTAGTTVGPMTSITATTTTSTTTTTTTTTATTTTTASATAR
PQKKAAVKMANEIQITDITETSAKLRWGNPEPQSAYVFDITVTSAHDHSLVLKQNVTGTE
RVIGGLRSGQKYHVVIIGYQKSQIKLNYMATFSTKSPPQPRAPSVATANLMVNTEPLEVP
ETDPCLLDFDMGTQCKEYQVMWFFDYKNKICTQVWYGGCGGNANRFETEADCISRCLKPS
TENAMQQPPLENRLLSVTDICRLQKEEGTCRNFTLKWYYDPDTKSCARFWYGGCGGNENK
FKTQKECEKVCIPGHVNPGVVTMIGT
NT seq 9621 nt   +upstreamnt  +downstreamnt
atgaggaaacatcgacatttgcccatagtggcaatcatttctatcatactctctggctgt
tgtatggttgaggctcagcaacaagaagatgtcaaaatcgttgctgcggctgatataata
tttctagtggattcctcttggagcattggaaaggaacatttccaacttgttcgagagttt
ctatatgatgttgtaaaatctttagatgtgggagagaatgatttccattttgctctggtc
cagttcagcggaaacccacacacagagttccagttaaacacgtatcgctctacacaagat
gtcctgtcccacattttgaacatgccttatatggggggaggcaccaagactggaaaagga
ttagaatacctaattcagaaccatctcactaaagctgctggaagcagagcaagtgatggc
accccccagattattatagtgttaacggatggacgatctcaagatgatgtggctctgcca
tcatctgtccttaagtctgctgatataaacatgtttgcaattggagtgcagaatgcagtg
gaaggggaattaaaggaaatagcaagtgaaccactcgatttgcacattttcaacctagag
aattttactgctctccacaacatagtaggagacttagtggcaagtgttcgtacatctatg
actccagaaatggctggagagaaaggagtggttaaagacatcacagcgcaagattctgct
gaccttattttccttattgatggatcaaacaacatcggaagtgtcaatttccaagccata
cgagatttccttgtaaatttggttgaaaacctcagagttggcgctcagcagatacacatt
ggggtggtgcagtatagtgatgaacccagaactgagttctttttgaacacatactccaca
aaagctgatgttctggatgcagtgaaagcacttagttttcttggtggcgaggaagctaac
actggtgcagcactggaatttgtggtgcagaaccacttcacccaggcaggaggcagcaga
atagaggaagctgtgcctcagatattagtgctgataagtggtggagagtctagtgatgat
gtcagagagggagtgttagcagtgaagcaagctagtatattttcacttagcattggggtc
ctgaatgctgacagtacagagctgcagcagattgctactgatggaagcttcgcattttct
gccctggatatccgtaaccttgatggtcttcaggaacaattactaccaaacattgttgga
gtggcccaaagactcattttattagaggccccaaccattgttaccgaagttattgacgta
aacaagaaggacatagtcttcctgatagatggcacaactgcaatgggaagcacccatttt
tctgcagtccgtgatttcattgccaaaatcgtccaaaggctggaaattggaccagacctc
atccaagtagctgtggcacaatacgcagatactgtaagaccagaattccattttaatgct
catcagtccaaaaaagaggtctcttctgctgtgaggaaaataaaattaatgggtggttca
acactcaatactggttcggccttggactttgttagaaacaacttcttcatcagttctaca
gggtgtaggattgatgaaggtgttttgcctatgctagtccttgttacgaatggcaaatcc
aaagatggtattacccaacctgcagcagagatgaaaaggagcaggataatggttcttacc
attggatccaaaaatgcagacaagttggagcttcaagaaattgcctatgagccggaactt
gttttcactgcagatgaattccgtgtccaaagcctgcaaggcattcttcctagagtgctg
acacctctaaaaacactctctggagcaataatcattcaagaaataccatcagttcaagta
aacaaaagggatatcatctttcttttggatggatcactcaacgttggaaatgccaacttc
ccatttgtgcgtgactttgttttgaaactagttaactaccttgatgttggaattgacaat
atacgaatcggcctaatacaatttagtgacactcccagaactgaattctttttaaacaca
tacctaaccaaatcagatataattaatcgcctgggccagttgaagcccaagggaggttca
gtgttgaacactggatctgcattagactttgtccttttaaaacacttcactgaagcaggt
gggagcaggatagatgaacaagttccacagatcctagtcctggttacagcagggcaatct
gctgatgcatacttggatgcttccaatgcattggctcgggccggagtgctaactttttgt
gttggagttaggaatgctgataaggcagaacttgagcagatcgcatttaatccaagaatg
gtatattttacggatgatttcagttctctggcagctttaccacaggaattaattaaacct
ttaacaacatatgttagtggaggtgtacaagaagttccactcactccatcagaaagcaag
aaagatattttattcatgattgatggttcagccaacctattgggtcacttccctacagtc
cgagactttgtgtacagaattatttctgacctcaatgtgagtccagatgccatccgagtt
gctgtagctcagttcagtgacaatgtccaagttgagttcaacttcagtgagttgccatcg
aagcaagacatgcttctgaaagttaaacggatgaagataaaaactgggaagcaactgaac
ataggttctgcactggattacgcagtgaggaacctgcttgtgaagaacgctgggagcagg
attgaagaaggagttcctcagtttttggtcctacttgctgctgggaaatcaactgatagt
gtggaagatgcagcggaggccctgaaacgagctggtgttgtcacttttattatcaaagcc
aggactgcagagcaagtagaacttgaaaggatagtttacgctccacagtttattctgcct
gtggatgccctttctaaaattggagaaattcagtcaaacatagtaaacctattgagaacc
atacagtatcaaccaacagttgttggagatgagaagaaggatgtggtgtttctgattgat
ggctcagatggtgcgagaagagggttcccttttctacagggctttgttttagaaatggtt
gaaaacctggacatcggtcgtgacagagtccatgttgctgtagcacaatacagcaatgtc
atcagacctgagttcctttttaacagctactatgataaagcagatgttgttagagccatt
cagggcatgtctgttatgggagggtctcctctcaacactggtgcagccttggactatctc
ataaagcagatattcactgctcagagtgggagcaggattgctgaaaatgtccctcagttc
ttgattttgctgactgctgacagatcaagggacgatgtgcgaaggccctcagtggtcttg
aagacaactggcgctgtgccttttggcattggcattggaaatgctgatatcacagaaatg
cagacaatttcattcatcccagactttgctgctgttgtccctgacttcaatcaactgaat
actgtacagcagctcatttcagaccgagtcactcggctaaccaaaaaagaaatagaaaca
ctagccccggatctgctttttccatcacccagtccagccaagaaagatgtggtgtttctc
attgatggttcccaatttgcttcccctgagttccagctaattcgtgatttcattttaagg
gtagtagacagcttcgatataggttttgacaccactcgtgttgcagtggtccagttcagc
acagaccccaaggttgaatttctgcttaacacccactctaccaaagatgacgtgcaaact
gctgtgagaagactaaggcccaaaggtggcagagaagttaatgtaggagatgctctggag
tatgtagcaaagaatatctttacaagaccctctggaagtcgcatagaggatggtgtccct
cagtttttaatacttctctcttctcgcaagtctgatgatgaagtagtggcccctgcagtc
caagtcaaacaagttggtgtagcacctctgattatagcaaaaaatgtggatcctgaggag
ttggctcagatttctcttagccctgaatatgtataccaggtcacaaacttccaggaattg
cccagcatagaacagaagctgctgacccctcttacttccctcactgctggtgacataaaa
gggatcctgggagatgtctctctccctccagaaggtgatggtgatgaaagggacatagtc
ttcctcattgatagctctgatagtgtcaggactgatggacttgctcacattcgagatttc
atcattagaattgttcagcagctcaatgttggtgcaaacaaagtgagaattggtgtgatt
cagttcagtaatgatgtgtttcctgagttctacttaaaaacacacaaatccaaaactgca
gtactacaagccatacgccgcctgagattcagaggaggatctccactgaatgctgggaaa
gctctagactatgttgtaaagaattacttcattaagtctgcaggaagcagaagagaagat
ggggtccctcagcatttagttttgttccttggagagaggtcccaggatgatgttaaccaa
ccttcttctgtgatcaacattgctgggattaagagtcaaggtgtcggagcaaggaatgca
gacagaactcagctggagaggataaccaatgatcctagacttgtatttacagtcagagat
tttctagatcttccaagcatagaaagcaggttcctccaaccaattttacaatctcaaata
cagacaaccgaagcacctgaatttatagacatggatgggaagaaacaagctgatattgtg
tttttgctggatggctccatcaatttagggagagacaatttccaagaagttatccaattt
atttcttctatagttgatgctatctatgatgatactgcctctattcaggtaggactggcc
cagtacaactcagatgtgactgatgaattctttctcaaggatcatgccaccaaacaagag
attttagatgctatcaataaagtagcatataaaggaggcagggtggtgaatactggagca
gcaatcaaacatctccaggccaaacactttgtgaaggaggctgggagccgggcagaccag
aggatacctcaaattgcttttatcgtaacaggaggcagacctgcggatgatggacagaca
gctgcattggcactaaagcagtctggggtgaagctatttgcagttggtgtgaaaaacata
gatctggatgaagtgaacaaactgtccagtgaacctgctactgggttcagagtgaaagct
gcccaagagctgtcagaattgaatgagcaaattttagttacaatggatgctgttatgaag
gagaaactctgtccaggagtgactgatatttcaagagactgcaagcttgatgtgatactg
ggctttgatgtctcagatactgcaccgggacaaagtatactttattctcagaaagggttg
gagtcaaacgtagaggccattctgaacagaattactcagatgcagaggatcagctgtact
ggtaaccaacggccaactatacgagtggccatcatgggccagtccactactggagcaatt
gaaggactggactttattgagtacgagccagaattgtttgagaagttccaagccatgctc
aaccgtggtccatattatctaacagcagacacgctgaagtcttatcagaacaaatttaga
acagctcctggtgacagtgtgaaagttgtaatccacctaactgatggtgcagatgatgga
atgaatcgcttagtggctgcttcagctgctctgcaaaaggaaggtgtaaaggctctcatc
tttgttggactggaaagagtgcaaaatttagaagatttaatgcaaatagaatttggacgt
gggtttacatataacaggccactcagagtaaacctattggatttagattatgaactggca
gaacaactcggcaacattgcagaaagatactgctgtggaatcccatgtaagtgttctggg
cagcgaggagacaaaggaatgctaggtcccattggaccaaagggtgtcccaggtgagaat
ggttacagagggtatcctggtgatgaaggaggcccaggcgatcgtggtccaccaggtgtc
aatggaactcaggggttccaaggatgtcctggtcaaagaggaattaaggggtcacgtgga
ttcccaggagaaaagggagaactgggagaaatgggtctggatggaatagatggtgaagac
ggaaacaaaggtctaccaggcttttctggggagaaaggaaatcctggacaaaggggttat
aaagggtttaaaggaggaaaaggagaacgaggcgatcgtgggcttcgaggtgatccgggt
gagaatggagttgataacactcagcgaggacccagaggttcaaagggtgaaattggccca
atgggagatccaggagtagatggggcaccaggttcccttggtggacctggaaagaatggt
gttgtaggacgaagagggcccccaggacccaaaggtcccaaaggtacaccaggacaagca
ggacaagcaggagaacagggaagaagaggggttcagggtcctcctggtcagcttggaact
ccaggtatgagaggagaacaaggcctgccaggaccaaggggttctggaggtgctgctgga
ccacctggagaacgtggcaggactggtccctttggacgaaagggtgaacctggtgattcc
ggacccccaggaccaaatggatttcccggccaacgaggagaaacaggagaagatggacaa
agtgcaactggtgcttcaggacctaaaggcaaaaagggagaaagaggtttcccaggaccc
acaggacaaaagggagcatctggagaccgtggtggtcctggaggtcttggtctcaagggc
aacagaggccgcagaggaaatgcaggagaacccggagatccaggtcagccaggagactac
ggatatgcaggatcacctggacttaggggtgatagaggagaagccagagatgaatgtgca
cttgttcggaacatcaaagacaaatgtccttgctgctatggtcccaaggaatgccctgtt
tacccaacagaactggcatttgctatagatacctctcaaggcgtcaatagggatgttttc
aacagaatgaaacaagcggtgctaaaggtggttaacaatctgactattgctgagagcaac
tgcccacgaggtgcccgggtagctcttgttacctacaacaatgaggttaccacagagatt
cgttttgctgactccagaaagaaatcaagccttatacaacaacttgagaacctgcaacca
attcagacaacaaagcaacgtagcctggaaacagccatggcttttgtagccaggaatact
ttcaagcgttcacgcagtggttttcttatgaagaaggtggctgttttcttcagcaatgga
ccaacaaggtcatcttcacaacttactgatgctgtgctgaaactgtatgatgctggagtt
tggcctgtattccttactaacagagacgattcagttctcgtaaacgcactgaagatcaat
aacaccgcagtgggacatgctactgtccttccgactggcggagatcagttgaatcgaact
attcagagattactgagatgtcatatttgtttggatacatgcgatcctgatactgactgt
gaacctgttgttcgaaggactggtgtcagagacaaaagagcagcctctacagatgtagac
actgacatggcattcatcatagatagctctgaaagcacaactcctctccagtttagtgag
ataaaaaagtatatttcctacatagtaagacacatggtaatcagctctgatccaaaggca
tcacagcaccacgcaagagtagcagttcttcaacatgctccctatgagtatgaaacaaac
acaagctcatcaccagtgaaagtagtgatgtcactaacagattatggatccaaagataag
atcactaattttattcagaatcaaatgactcagctacatggcacaagggctcttggaagt
gcaattgaatacacaatagcacaagtttttgaaagtgcacctaacccaagggatctgaaa
gtcatagttttgatgatgactggaaaagttaaaaaagaagaacttgaatatcttcaaaga
gttgttgtacatgctaaatgcaaaggatatgcctttgttgtgatggggattgggaagagg
gtgaatgtcaagaatatctacagcttggctagtgagccaaatgatgtgttcttcaaatta
gttgataagccatctgagttgcaggaagattccttactgcgttttgggagactgttacca
tcttttataagcagtgaaaatgctttttacctgtctccagacgtaaggaagcaatgtgat
tggttccagggtgatcagccagctaagaaccctactaaatttggccaaaaaacaatgtat
tttgcaaccaatgttactaaaaacacaagtgtaggtacaagtactggcaccagtgctagg
accaaaaccagcgacagcaacaccatggcagtcaccagtgccagcaccattgcacacacc
actgcaggcaccacagtgggccccatgaccagcattacagcaactaccactaccagcacc
accaccaccaccaccaccaccactgccaccaccactaccactgcaagtgccactgcacgt
cctcaaaaaaaagcagcagttaaaatggcaaatgaaatccagatcactgacatcactgag
accagtgctaagctccgctggggaaaccctgagcctcagtctgcctatgtttttgacatc
accgtcacatcagcacatgaccactccctagtcctgaagcaaaatgtaactggcactgaa
cgagtcattggaggcctcagaagtgggcagaaatatcatgtagtaattattggttatcaa
aaatcacaaatcaaactaaactacatggcaacgttcagcacaaagagtccaccccagccc
agggcaccttcagtagcaactgccaacctcatggtgaacaccgagcctttggaagtccca
gaaacggatccttgcttgctggattttgacatgggcactcagtgcaaggagtatcaggtt
atgtggttctttgactacaaaaacaagatctgcacccaggtgtggtatggtgggtgtggc
ggtaatgccaatagatttgagacagaagctgattgcattagcagatgcttgaagccatca
actgagaatgccatgcagcaaccaccccttgagaacagattattgtcagttacagatatc
tgcaggttgcaaaaagaagaaggaacctgcaggaattttacgctaaaatggtactatgac
ccagataccaaaagctgtgcaaggttctggtatggtggttgcggtggaaatgaaaacaaa
tttaagacacagaaagaatgtgaaaaagtttgcattcctggtcatgttaatcctggggtt
gttacgatgataggaacttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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