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KEGG   Chaetura pelagica (chimney swift): 104395721
Entry
104395721         CDS       T08631                                 
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
  KO
K06238  collagen type VI alpha
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea04510  Focal adhesion
cpea04512  ECM-receptor interaction
cpea04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104395721 (COL6A3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104395721 (COL6A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpea04147]
    104395721 (COL6A3)
   00536 Glycosaminoglycan binding proteins [BR:cpea00536]
    104395721 (COL6A3)
Exosome [BR:cpea04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104395721 (COL6A3)
Glycosaminoglycan binding proteins [BR:cpea00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104395721 (COL6A3)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   104395721 (COL6A3)
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI fn3 Ig_J
Other DBs
NCBI-GeneID: 104395721
NCBI-ProteinID: XP_010003753
Position
Unknown
AA seq 2888 aa
MRDQPHVPWLAVLGLLLSGCGWVGGQQQSAEESADLIFLLDGSNHVGSAHFPAIRDFLVD
LVASLPVGAQQIRVGVVQYSQQARTELALNSFSTKADVLDAVKALGFLGGEEANTGAALE
FVVENLFTQAGGSRREEEVPQILVLISGGESSDDVREGLLAVKQARIFSFSIGVLSADRA
ELQQIATDGSFAFTALDIRNLGALRELLLPNIVGVAQRLILLEAPTIVTEVIEVNKKDIV
FLIDGSTALGTGPFNSIRDFVAKIVQRLEVGPDLIQVAVAQYADTVKPEFYFNTHQSRKD
VMANVKRMKLMGGTALNTGSALDFVRNNFFTSAAGCRVEEGVLPMLVLITGGKSRDAVDQ
AAAEMKRNRIVTLAIGSRNADMAELQEIAHERDFVFNPNDFRVQFMQAILPEVLSPIRTL
SGGMIIPEPPPVEVSQRDVIFLVDGSLQVGDANFPFVRDFVATLVNSLDVGSDRTRVGLV
QFSDTAQTEFSLSSYHTRADITQHLGQVRPRGGSVLNTGSALQFVLSNHFTEAGGSRIHA
QVPQVLVLVTAGRSAEPFLQVANQLARAGVLTFAVGVRSADKAELEQIAFNPRMVYLVDD
FSALTALPQELTKPITTYVSGGVEEVPLAPTESKKDILFLLDGSANLLGSFPAVRDFVHK
VISDLDVGSDATRVAVAQFSDTLQVEFDFAELPSKQDMLLRVKRMKIKTGKQLNIGAALD
EAIRRLFVKEAGSRIEEGVPQFLVLLAAGRSTDEVEQPSDALKEAGVVAFAIKAKSADPA
ELERVAYAPQFILSVESLPRIAELQPNIVNLLRTIQLQPAVERGEKKDVVFLLDGSDGVR
RGFPLLKTFVQRVVESLDIGRDKVRVAVAQYSNSIQPEFLLDSYEDKADLLSAIEEMKVL
GGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQFLILLTADRSQDDVRRPSVVLKTSGTV
PFGIGIGNADLTELQTISFLPDFAISVPDFSQLETVQQVVSNRVVRLTKKEIQSLAPDLV
FTSPSPAGVKRDVVFLVDGSRYAAQEFYLVRDLIERIVASLDVGFDTTRVSVVQFSEHPH
VEFLLNAHSTKDEVQGAVRRLRPQGGQQVNVGEALEFVAKTIFTRPSGSRIEEGVPQFLV
ILSSRKSDDDLEHPSLQVKQVGVAPMVVAKNMDPEDMVQISLSPDYVFQVSSFQELPSLE
QKLLTPIETLTGDQIKRLLGDVQVPEGSGEEKDVVFLIDSSDAVRPDGLAHVRDFISRIV
QQLEVGPNKVRVGVVQFSSNVFPEFQLKTHKSKNAVLQAIRRLRHRGGSPVNAGKALDYV
VKNYFIKSAGSRIEDGVPQHLVVILGDRSQDDVSRPANVITSTSIQPLGVGARNVDRNQL
QVITNNPERVLVVQDFTELPALQKTVQSILEELPIPTTETPGVFGPGSKKQADIVFLLDG
SINFRRDNFQEVLQFVYSVVDAIYREGDSIQVGLAQYNSDVTDEFFLKDYSTKAEILDAI
NKVVYKGGRIANTGAAIKHIQEKHFVKEAGSRIDQRVPQIAFLITGGKSSDDGPSASVEI
ARKGVKVFAVGVRDIDLKEVSRLASESATGFRAATAQELSELNEQVLVTLEAAMEEKLCL
GTSDVTRDCDLDVILGFDVTDVGPGQNIFTSQRGLESRVEAVLNRITQMQKISCTGNQAP
NVRVAIMAQARGGPVEGLDFSEYQPELFERFQGMRSRGPYFLTADTLRSYLSKFSSTPSG
STKVIIHFTDGADDSMDQLEAASSALHAEGVHALRLVGLDRVPDFERLMQLEFGRGFTYN
RPLRVNLLDLDFELAEQLDTIAERTCCRVPCKCSGQRGDRGAPGPVGPKGATGDLGYGGY
PGDEGGPGERGPPGANGTQGFQGCPGHRGTKGSRGFPGEKGELGEIGLDGIDGEEGDKGL
PGSSGEKGYSGRRGDKGVKGERGERGDRGLRGDPGDSGADNTQRGPKGQKGEIGPMGEPG
PEGVAGQAGGAGRKGMAGRRGPIGVKGTPGTLGQAGPAGEQGMRGPQGPPGQQGTPGIRG
EQXXPGPRAGAGPPGTPGERGRIGPLGRKGEPGNPGPKGPKGQQGPRGEMGDDGRDGIGG
PGPKGRKGERGFLGYPGPKGGPGDRGVAGGPGPKGNRGRRGNAGDPGTPGQKGEVGYPGP
SGLKGDKGESRDQCALVRNIKDKCPCCYGPKECPVFPTELAFAIDTSSGVGREVFNRMKQ
TVLRVVNNLTIAESNCPRGARVALVTYNNEVTTEIRFADARKKSSLLQQIQNFQATLTTK
PRSLETAMSFVARNTFKRARSGFLMRKVAVFFSNGETRASPALSEAVLQLYDAGVLPVFL
TSRTDPVLTRALEINGTALGRAIVLPASANQLNETIRVLLTCHVCLDVCEPDPACGAQRP
TFRDRRAAPTDVDTDMAFIMDSSESTTPLQFHEMKKYISHLVSNLEISSEPRAAQHHARV
AVLQQAPYEHQTNSTFPPVQTEFSLTDYGSKEKIINYLHNQMTQLHGTRATGRAVEHTIA
HVFESAPSPRDLKVIILMVTGKVEQQELQHLQKVVMDAKCKGYFFVVLAIGRKVDPKDIY
SLASEPNDVFFKLVDKPGELHEEPLLRFGRLLPSFIRSDFAFHLSPEMKKQCEWLQSDQQ
AKSSRPQVVSVPPNVTVTLGGSTKSPVSSTAQPRAPHPPVPTPPGQGNSTRATGRAGATA
GGRRRSAKPQEIQVTEVTEHSARLRWGSPDPPSSYTFDVTISSAQDHALLQQQNVTSTEH
LIQGLASGQKYLVAITGFHKSQPKVTYTGTFSTKTPAQDKVSLANMMLNTEPLEGPESGP
EVCWLQKDEGPCRKFVLQWHHDPSTRRCARFWYGGCGGNGNRFPSQKECERLCVPGTINP
GVVTTMGT
NT seq 8667 nt   +upstreamnt  +downstreamnt
atgagggaccagccacacgtgccctggctggcagtgcttggcctcctgctctcaggctgt
ggctgggttggtggccagcagcaatcagctgaagagtctgctgaccttatattccttctt
gacggatcaaaccacgtgggaagtgcccattttccagccatccgtgatttccttgtagat
ctggttgccagcctcccggttggagctcagcagatccgcgttggggtggtgcagtatagc
cagcaagccaggaccgagctggccctgaacagcttctccaccaaggcagatgtgctggat
gcagtcaaggccctgggcttcctcgggggggaggaagccaacactggtgcagctttggag
tttgtggtggagaacctcttcacccaggcgggaggcagcaggcgagaggaagaggtgcct
cagatcttggtgctgatcagtggtggagagtctagtgatgatgtcagagagggcttgttg
gctgtgaagcaagctaggatcttctcctttagcattggggtgctgagtgctgacagggct
gagctgcagcagattgctaccgatgggagcttcgcttttactgccctggacatccgtaac
cttggtgctctccgggagctgctcctgcccaacattgttggagtggcccaaaggctcatt
ttgttagaggccccaaccattgtgactgaagttattgaggtgaacaagaaggacatcgtc
ttcctgatcgatggctcaactgctctgggcactggccccttcaactccatccgtgacttc
gttgccaagattgtccagaggctggaggttggcccagacctgatccaggtggccgtggct
caatacgccgacacggtgaagccagagttttatttcaacacccaccagagcaggaaggac
gtgatggccaatgtgaagaggatgaagctgatgggtggcacagccctcaacaccggctcc
gcgctggactttgtgaggaacaacttcttcaccagtgccgctggctgcagggtggaggaa
ggggtgctccccatgctggtgctcatcacggggggtaagtccagggatgctgtggaccag
gctgcagcagagatgaagaggaacaggattgtcactctggccatcggctcaagaaacgcc
gacatggcggaactccaggaaattgcccacgagagggattttgtcttcaaccccaatgac
ttccgtgttcagttcatgcaagccatcctccctgaggtgctctcacccatcaggaccctc
tctggaggaatgattatcccagaaccaccaccagttgaagtaagccaaagggatgtcatc
ttccttgtggatggatcactgcaggtcggagatgccaacttcccctttgtgcgggacttt
gttgccaccctagttaactccctcgatgtcggcagcgacagaacccgcgtgggtttagtg
caatttagtgacactgctcagaccgagttctccctctcctcctaccacacccgggctgac
atcacccagcacctgggccaggtgcggccccggggggggtcggtgctgaacacgggctct
gccctccagttcgtgctctccaatcacttcacggaggctggtgggagcaggatccatgcc
caggtgccccaggtcctggtgctggtgacagcagggaggtctgctgagcccttcctgcaa
gtggcaaatcaattagctcgggctggagtgctgacctttgctgttggagttaggagtgct
gataaggcagagctggagcagattgcctttaaccccaggatggtgtatttggtggatgat
ttcagtgccctgacagctttaccccaggagttaactaagccaatcacaacatatgttagt
ggaggtgtggaagaggttccactcgccccaacagaaagcaagaaagatattttattcctg
cttgatggctcagccaacctcttgggaagcttccctgctgtccgggactttgtccacaaa
gtcatttctgacctggacgtgggctctgatgccacacgagtggctgtggctcagttcagt
gacaccctccaagtggaatttgactttgctgagctcccatcgaagcaggacatgctgctg
agggtgaagaggatgaagatcaaaacagggaagcagctcaacatcggagcggcgctggat
gaagccataagaaggctgtttgtgaaggaagctgggagcaggattgaggaaggagttcct
cagtttttggtcctcctcgctgctgggaggtcgacggacgaggtggagcagccctcggat
gccctgaaggaggctggagtggtggcctttgccatcaaggccaagagcgccgaccccgcg
gagctggagcgcgttgcttacgccccccagttcatcctcagcgtcgagtccctccctcgc
attgcggagctgcagccaaacatagtcaacctgctgagaaccattcagcttcagccagca
gttgagagaggtgagaagaaggacgtggtgtttctccttgacggctcggatggtgtcaga
agaggtttccctctcctgaagacctttgtccagagagtggtggaaagcctggatatcggc
cgcgacaaggtccgcgtcgccgtcgctcagtacagcaacagcatccagcccgagttcctg
ctggactcctacgaggacaaggcagatctcctcagtgccatcgaggagatgaaggtgctg
ggaggatctcccctgaacactggagcagcccttgactacctcatcaagaacgtcttcacg
gtgtcgagcggcagcaggatcgcggagggcgtcccgcagttcctcatcctgctgaccgcc
gaccgctcccaggacgacgtgaggaggccctcggtggtcctgaagaccagtggcacggtg
ccctttggcattggcattgggaacgccgacctcacggagctgcagaccatctccttcctg
ccggattttgccatctctgtgcctgacttcagccagctggagacggtgcagcaggtggtc
tccaacagagtcgtccgcctgaccaagaaggagatccagtcacttgcccctgatctggtt
ttcacatcgcccagcccagcgggcgtgaagcgggacgtggtgttcctggtggacggctcc
cgctacgccgcccaggagttctacctcgtccgcgacctcatcgagcgcatcgtcgccagc
ctggacgtgggcttcgacaccacccgcgtctccgtggtccagttcagcgagcacccccac
gtggagttcctgctcaacgcccactccaccaaggacgaggtgcagggcgccgtccggcgg
ctgaggccgcagggtggccagcaggtcaatgtgggggaggccctggagttcgtggccaaa
accatcttcacccggccctcggggagccgcatagaggagggagtcccccagttcctggtc
atcctctcctcccgcaagtccgacgacgacctggagcacccgtccctccaagtcaaacaa
gtgggggtggcaccgatggtggtggccaagaatatggatcctgaggacatggtgcagatt
tcccttagtcctgattatgtcttccaagtctccagcttccaggagctgcccagcctggag
cagaagctgctgactcctatcgagaccctgaccggggaccagatcaaacggctgctggga
gacgtgcaggtccctgaaggttccggggaggagaaagacgttgtgttcctcatcgacagc
tcggacgcggtcaggcccgacgggctggcccacgtccgggacttcatcagcaggatcgtg
cagcagctggaggttgggcccaacaaggtgcgggtgggtgtggtgcagttcagcagcaac
gtcttccccgagttccagctcaagacccacaagtccaaaaacgctgtcctacaagccatc
cgccggctcaggcaccgcgggggatccccggtcaacgcgggcaaagccctggactacgtg
gtgaagaactacttcatcaagtctgctgggagcaggatagaggatggagtgccccagcac
ctcgtggtcatcctcggagaccgctcccaggacgatgtcagcaggcctgccaacgtcatc
acctcaaccagcatccagcccctgggcgttggagccaggaacgtggacaggaaccagctg
caggtcatcaccaacaaccctgagcgggtgctggtggtgcaggacttcactgagctccca
gccttgcagaagacagtgcagagtattcttgaagaacttcccatacccacaacagaaacc
cctggggtttttggacctgggagtaagaagcaagctgacattgtgttcctgctggatggc
tccatcaacttcaggagggacaacttccaagaagttctccagtttgtctactctgtggtg
gatgccatttacagggagggcgactccatccaggtgggtctggcccagtacaactcggat
gtcaccgatgagttcttcctcaaggactattccaccaaagctgagatcttagatgccatc
aacaaagttgtctacaagggtggcaggatcgccaacactggagcagccatcaagcacatc
caggaaaagcactttgtcaaggaggccggcagccgcatcgaccagagggtgccccagatt
gccttcctcatcacgggtgggaagtcctcagatgatgggccaagtgcctctgtggagatt
gcccggaaaggcgtcaaggtctttgctgtgggcgtgagggacatcgacctgaaggaggtc
agcaggctggccagtgagagtgccacaggtttcagagcagccacagcccaggagctgtct
gagctgaacgagcaggtcctggtgacactggaagctgccatggaggagaaattgtgtcta
ggcacatcagatgtcaccagagactgtgacctggatgtcatccttggttttgatgtcacg
gacgtcggccctgggcaaaacatcttcacctcccagcggggtctggagtcccgcgtggag
gctgtgctgaacaggataactcaaatgcagaagatcagctgcacgggcaaccaggccccc
aacgtcagggtggccatcatggcccaggctcgggggggacccgtggaggggctggacttc
tccgagtaccagcccgagctctttgagaggttccaaggcatgcgcagccgcgggccctac
ttcctcactgcagacaccctgaggtcctacctcagcaaattcagctccacgccctctggg
agcaccaaggtcatcatccatttcacggatggggcagatgactccatggaccagttggaa
gctgcttcatctgctttgcatgcagaaggtgtgcacgctctccgcttggtggggctggac
cgggtgcccgacttcgagcggctgatgcagctggagttcggtcggggcttcacttacaac
cggcccctgcgggtgaacctcctggacctggacttcgagctggccgagcagctggacacc
atcgctgagcggacgtgctgccgcgtcccgtgcaagtgctccgggcagcgtggggaccgc
ggcgcgcccggccccgtggggcccaagggcgccacaggtgaccttggctacggagggtac
cctggcgacgagggaggaccgggcgagcggggaccaccgggtgccaacgggacacaaggt
ttccagggctgccctggccacagaggaaccaagggttctcggggattcccaggagagaag
ggtgaactgggagagatcggtctggatggcattgatggagaagagggagacaagggcttg
cctggctcctctggagagaagggatactctggcaggaggggtgacaagggagtaaaagga
gaacgaggagaacgaggtgaccgtgggctccgtggagacccgggagactcaggagctgac
aacacccagaggggacccaaaggccaaaagggtgaaattggacccatgggagagccagga
ccagagggggtggctggccaagctggtggagctgggaggaaggggatggcaggacgaagg
ggacccatcggagtgaagggcaccccgggcacgctgggccaagcaggaccagcaggagaa
caaggcatgagaggaccacaggggccaccaggccagcagggcaccccaggcatcagagga
gagcagnnnnnncctggacccagggctggtgctggacccccaggaaccccaggagaacgg
ggcaggatcgggcccctgggacggaagggagagcctggaaaccctggacccaaagggcca
aagggacagcaaggtccacgaggagagatgggtgatgatggacgagatggaattggtggc
ccaggtcctaagggcaggaagggagaacgtggcttccttggctacccaggacccaagggt
ggaccaggggatcgtggtgttgctggaggccccggccctaaaggaaacagaggccgcaga
ggaaatgcaggagatcctgggacacctggtcagaaaggagaggttggataccctggacca
tctgggctgaaaggtgacaaaggagagtccagagatcaatgtgccctggtgaggaacatc
aaggacaaatgcccttgctgctacggtcccaaggagtgccctgtgttccccacggagctg
gccttcgccatcgacacctcctctggggtgggcagggaggttttcaacaggatgaagcaa
actgtgctcagagtggtcaacaacttaaccattgctgagagcaactgcccccggggagcc
cgggtggccctggtcacctacaacaacgaggtcaccaccgagatccgctttgccgatgcc
aggaagaaatccagcctcctgcagcagatccagaacttccaggccaccctgaccaccaag
ccacgtagcctggagactgccatgtccttcgtggccaggaacaccttcaaacgggcccgc
agtggcttcctgatgaggaaggtggccgtcttcttcagcaatggagagaccagagcctcc
ccggcgctcagcgaggcggtgctgcagctctatgacgccggggtcctgcccgtgttcctc
accagcaggacagacccggtgctcacccgagctctggagatcaacggcacggcgctggga
cgcgccatcgtcctcccggccagcgccaaccagctgaacgagaccatccgggtgctcctg
acctgccacgtctgcctggatgtgtgtgagcccgatcctgcctgcggtgcccagcgcccc
acattcagggacagaagagcagccccgacagatgtggacaccgacatggccttcatcatg
gacagctcggagtccaccactcccctgcagttccatgagatgaagaagtacatttcccac
ctggtcagcaacctggagatcagctcagagccccgggcagctcagcaccacgccagggtg
gcagttctccagcaggctccttatgaacatcagaccaactccaccttccccccggtccaa
accgagttctccctgacggattatggctccaaggagaagatcatcaactacctccacaac
cagatgacccagctccacggcaccagggccacgggcagggcagtggagcacacgatagct
cacgtgtttgagagcgccccaagcccccgggacctcaaagtcatcatcctgatggtgact
gggaaggtggagcagcaggaactccagcacctgcagaaggtggtgatggatgcgaaatgc
aaaggctacttcttcgttgtcctggccattggcaggaaggtggatcccaaggacatctac
agcctggccagcgagccaaacgatgtcttcttcaagctggttgacaagccaggggagctc
cacgaggagcccctgctgcgtttcgggaggctgctgccatccttcatcagaagtgacttt
gccttccacctgtcgccagagatgaagaagcagtgtgagtggctccagagtgaccagcaa
gccaagagctccaggccacaagtagtgtcggtgccacccaacgtgaccgtgaccctgggt
ggcagcaccaagagtcctgtgagctccacagcccagcccagagccccccacccacccgtg
cccacccccccgggccaggggaacagcaccagggccaccggccgcgccggcgccaccgcg
ggaggcaggaggagatcagccaagccccaggagatccaggtgaccgaggtgaccgagcac
agcgcgcggctgcgctggggcagccccgaccctcccagctcctacaccttcgatgtcacc
atcagctccgctcaggaccatgcgctgctgcagcagcagaacgtgaccagcactgagcac
ctcatccagggactcgccagtggccagaaatacctcgtggccatcactggcttccacaag
tcccaacccaaggtcacctacacagggaccttcagtacaaagaccccagcacaggacaag
gtctccttggccaacatgatgctcaacactgagcccctggaagggcctgagagtgggccc
gaggtttgctggctgcagaaggacgaggggccctgcaggaagttcgtgctccagtggcac
cacgaccccagcacccgccgctgcgcgcgcttctggtacgggggctgcggcggcaacggg
aacaggttccccagccagaaggagtgtgagaggctctgtgtgccaggtaccatcaacccc
ggcgtggtgaccacaatgggaacatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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