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KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100398785
Entry
100398785         CDS       T03264                                 
Symbol
HDAC10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform X3
  KO
K18671  histone deacetylase 10 [EC:3.5.1.98]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04613  Neutrophil extracellular trap formation
cjc05034  Alcoholism
cjc05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100398785 (HDAC10)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100398785 (HDAC10)
  09165 Substance dependence
   05034 Alcoholism
    100398785 (HDAC10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100398785 (HDAC10)
Enzymes [BR:cjc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100398785 (HDAC10)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100398785 (HDAC10)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100398785
NCBI-ProteinID: XP_008978882
Ensembl: ENSCJAG00000003337
UniProt: U3FQ71
Position
1:complement(216338308..216344540)
AA seq 669 aa
MGTALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRKCGLEQRCLRLSAREASEEEL
GLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAVGAALQLVDAVLTG
VVQNGFALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLQRILIVDWDVHHGQGIQ
YLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVA
AFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAM
LEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMVPCQSALESIQSVRATQAPYWKSLQLQ
DVTPVPTSPSTHSPEGRPPPLLSGGPVCKTAASVLSSQLDQLCLHPAPPVCPAVALTAPD
ITLVLPPDVTQQEGAALNEETEAWARPHESLAQDEALTALGKLLYLLDGMLDGQVSSGMV
ATPPSAAAATLEVAIQRGLSHGAQRLLCVALGQLDWPPDLVHDGRILWLNIRGKEAAALS
MFQVSTPLPVLTGGFLSCILGLVLPLAYGFQPDLVLVALGPAHGLQGPHAALLTSMLRGP
AGGRVLALLEEDSTPQLAGILARVLHGEAPPSLGPYSVASPEDAQALMYLRGQLKPQWKM
LQCRPHLEA
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggggaccgcgcttgtgtaccacgaggacatgacggccacccggctgctctgggacgac
cccgagtgcgagattgagcgtcctgagcgcctgaccgcagccctggaccgcctgcggaag
tgcggcctggaacagaggtgtctgcggttgtcagcccgcgaggcttccgaagaggaactg
ggcctggtgcacagccccgagtacgtgtccctggtcagggagacccaggtcctgggcaag
gaggagctgcaggcgctgtctggacagtttgatgccatctacttccacccgagtaccttt
cactgtgcacggctggccgtgggggctgcactgcagctggtggatgctgtgctcacggga
gtggtgcaaaacgggtttgccctggtgaggccacctgggcaccacagccagagggcagct
gccaatgggttctgtgtgttcaacaatgtggccatagcagctgcacatgccaagcagaaa
cacgggctgcagagaatcctcatcgttgactgggatgtgcaccatggccaaggcatccag
tatctctttgaggatgaccccagcgtcctttacttctcctggcaccgctatgagcatggg
cgcttctggcctttcctgcgagagtcggatgcggatgcggtggggcggggacagggcctc
ggcttcactgtcaacctcccctggaaccaggtcgggatgggaaacgctgactatgtggcc
gccttcctgcacctgctgctcccactggcctttgagtttgatcctgagctggtgctggtc
tcggcaggatttgactcagccatcggggaccctgaggggcaaatgcaggccacaccagag
tgcttcgcccacctcacacagctgctgcaggtgctggctggtggccgggtctgcgccatg
ttggagggcggctaccatctggagtcattggcagagtcggtgtgcatgacagtgcagacg
ctgctaggtgacccggctccacccctgtcagggcccatggtaccgtgtcagagtgccctg
gagtccatccagagtgtccgtgccacccaggccccatactggaagagcctccagctgcaa
gatgtgacccccgtgccgacgagtcccagcacccattccccagaggggaggcctccacct
ctgctgtctgggggtcccgtgtgtaagacggctgcatctgtactgagctcccagttggac
cagctgtgcctccaccctgcaccccctgtctgcccagctgttgcccttacagcgccagat
atcacattggtcctgccccctgatgtcacccaacaggagggggcagccctgaatgaagag
acagaagcctgggccaggccacacgagtccctggcccaggatgaggccctcactgcactt
ggaaagctcctgtacctcttagatgggatgctggatgggcaggtgagcagtgggatggta
gccactccaccctcggctgcagcagccaccttggaggtggctattcagagaggcctgtcc
cacggagcccagaggctgctgtgtgtggccctgggacagctggactggcccccagatctc
gtccatgatgggaggattttgtggctgaacatcaggggcaaggaggcggctgccctatcc
atgttccaggtctccacaccactgccagtgctgacaggtgggttcctgagctgcatcttg
ggcttggtgctgcccctggcctatggcttccagcctgacctggtgttggtggcgctgggg
cctgcccatggcctgcagggcccccacgctgcactcctgacctcaatgcttcgggggccg
gcagggggccgagtcctggccctcctggaggaggactccacaccccagctagccgggatc
ctggcccgggtgctgcacggagaggcacctcctagcctaggcccttactctgtggcctca
ccagaggacgcccaggctctgatgtacctgagagggcagctgaagcctcagtggaagatg
ctgcagtgccgtcctcacttggaggcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (19)   
   RefSeq(nuc) (7)   
   GenBank (6)   
   EMBL (6)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

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