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KEGG   Ciona intestinalis (yellow sea squirt): 100186153
Entry
100186153         CDS       T01056                                 
Name
(RefSeq) chondroitin sulfate synthase sqv-5 isoform X1
  KO
K13499  chondroitin sulfate synthase [EC:2.4.1.175 2.4.1.226]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin01100  Metabolic pathways
Module
cin_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:cin00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    100186153
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:cin01003]
    100186153
Enzymes [BR:cin01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     100186153
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     100186153
Glycosyltransferases [BR:cin01003]
 Glycan extension
  O-Glycan
   100186153
SSDB
Motif
Pfam: CHGN Fringe Glyco_transf_7C DUF7164 Galactosyl_T
Other DBs
NCBI-GeneID: 100186153
NCBI-ProteinID: XP_002130637
Position
1:complement(5740314..5746034)
AA seq 851 aa
MRKRRLVQNTLRLVSGYACGLLLHYFLLSSKPKVCNEIRNDVLIRGGKRNVVERHSSPVL
PQSNIYLGMMSAEKFIDNRVQRALDTWLQKGSWKVEVFADATPDSLQVPAGLDFNIVTLR
SVDDAAYPPQKKCFMMLRHMYDHHIDNYDWFMRVDDDVYMDFPRLSKLLNTINSSMPVFF
GTPGFGMDPDDGIEDGMFYLMGGPGMIFSRGLLLELRAHFSHCIQHMFSPHEDVEIGRCV
WKHAKKAKIPIAWETIEFFYQQYDKNTGAVTNVVMADTTEQRTAKTVAYHAVKKHDLLYT
LHRQVLERRIKKLLNETAKLKREIQAMQTIQNMKEISSLTPYSKSSPLPYLLGSNTEMTV
LSKSRLSHWPITAAWLPQNPMIPRGASTIPAIFWDKYYRHQVDSVIPARGHQGKEQPTLL
KYLSEIENGILKKSCPHLSSNPQFTHGYLWVLPQHGAFISVAHKGLVKGEYSYCTTHVQV
SFAVTLLGEKDHPLSEHPLIAPSLVKRQSLVGYFVGEEIPPARKRLHHHSNTMVRYQEPV
LPVSFDSSKDRVLFVIPLHGRYRALELFMERYKRDFLNPLKEGKIANTLSGNVQLVIVLL
GARGDEHDMNRASAYLLHSYQQEFGTSLIRYHIADTGKRQFSRGAGLQLGSLVAGINDIV
FFMDIDMIVTPNLVAQCRRNVKHGKQAWYPIPYSQYDPDRQCYDGSLARSVDERSILNGA
DPAGDSSLGRSGARETIRQTPLTLEEDRGFWRDFGYGIACFYNTDFVSSGGFDLSIEGWG
EEDVRLYKAILASGVDVFRSKQSDLVHIYHTKHCDQRLVGEQARSCHRTKASHYASQMCL
AKTYFQRNNLS
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgaggaaaagaagattggttcaaaatacacttcgtttggtatctggttatgcctgtgga
ctattacttcactacttcttacttagttcgaagcctaaggtttgcaacgaaattcgaaac
gacgtgttaatacgtggcggcaaacgaaatgttgtggaaaggcattcgtcgcctgttctg
cctcaatctaatatatatttaggcatgatgtcagcagaaaaatttatcgacaatcgtgtc
cagagagccttggatacttggctgcagaagggaagttggaaggtggaagtatttgctgat
gctacacccgatagtctgcaagtacctgctggtcttgacttcaatattgtaacgcttcga
tcagtggatgacgcagcctacccaccacagaagaaatgcttcatgatgttacgtcatatg
tacgaccaccatattgataattatgattggtttatgagagtggacgatgacgtttacatg
gattttccacgactttcaaagcttctgaacacaataaacagcagcatgcctgtatttttc
ggtacgcctggatttggaatggatccagatgatggaattgaggatggaatgttttacttg
atgggtggtccgggaatgatattcagcagaggattacttcttgaactgcgtgcgcatttc
agtcattgtattcaacatatgttttcacctcatgaggatgtagagataggacgctgtgtg
tggaaacacgcgaaaaaggcaaaaatcccaattgcgtgggagactattgaattcttttat
cagcaatatgataaaaacaccggcgcagtgactaacgtagtgatggctgacactactgaa
caaaggacggccaaaactgttgcttaccatgctgtgaaaaaacatgatttgctatatact
ctgcacaggcaggttttggaaagaagaattaaaaaacttcttaatgaaactgccaaattg
aagagggagatacaagccatgcaaactattcaaaatatgaaagagatttcaagtctcacg
ccatattccaaatcttccccccttccctacctacttggaagcaacacggaaatgacagtt
ctttcaaaatcaagattaagtcactggccaatcacagctgcttggcttccacagaaccct
atgataccacggggtgcttcaacgataccagcaatattctgggacaaatattacagacac
caagtagactctgtaatcccagcaagaggtcatcaaggtaaagagcaacctacacttctt
aaatatctcagtgaaatagaaaatgggattttgaagaagtcgtgtccacacttgtcttcc
aacccacagttcacacacggttatttgtgggtgttgcctcaacatggagccttcatttct
gttgctcataaaggcttggtgaaaggagaatattcgtattgcaccacgcatgtacaagta
tcattcgctgtcacattattgggggagaaagatcacccgttgtcagaacatccattaatt
gcaccttcacttgttaaacgacaaagtttagttggatattttgttggtgaagaaatccca
ccagccaggaaacgattgcatcatcattctaacaccatggttcgatatcaagaacctgtc
cttcctgtttcatttgattcaagcaaagaccgtgttctgtttgttattcccttacatgga
agatacagagcccttgaactctttatggagaggtacaaacgtgactttttaaatccctta
aaagaaggaaaaatagccaacacactgtctgggaacgtgcagttggtgattgtattatta
ggagcacgaggggatgaacatgatatgaatcgagcgtctgcgtatttattacattcctac
caacaagagtttggaacttcactgatcagataccacattgctgatacgggcaaaaggcag
ttctcacgtggtgcaggattgcaacttggttcactcgtggctggaataaatgacattgtt
ttcttcatggacatcgacatgatcgttactccaaacttagttgctcaatgcagaagaaat
gtaaaacacggcaagcaagcgtggtaccctataccttacagtcaatatgatcccgaccgg
cagtgttatgatggtagtttggcacgttcagttgacgaaagatcgattttaaacggtgca
gatcccgctggtgactcctcacttggtcgcagtggtgctcgtgaaaccatccgacaaact
cctcttactttagaggaggaccgagggttctggagggatttcgggtacgggatcgcttgt
ttttacaacacggacttcgtttcaagtggaggttttgatctcagtattgaagggtggggg
gaggaagatgtcagactttacaaagcaattcttgcctccggtgtggatgtctttagatcc
aaacagtctgaccttgtacacatttaccacacaaagcactgtgatcaaaggttagttggt
gagcaggccagatcatgtcaccgcaccaaagccagtcattacgccagccaaatgtgtctt
gccaaaacctatttccaacgtaataaccttagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (8)   
   KEGG ENZYME (2)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (71)   

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