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KEGG   Ctenopharyngodon idella (grass carp): 127524379
Entry
127524379         CDS       T08802                                 
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
  KO
K06238  collagen type VI alpha
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04510  Focal adhesion
cide04512  ECM-receptor interaction
cide04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127524379
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127524379
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127524379
   00536 Glycosaminoglycan binding proteins [BR:cide00536]
    127524379
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127524379
Glycosaminoglycan binding proteins [BR:cide00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127524379
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   127524379
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI VWA_CoxE vWA_SIBA-E Radical_SAM
Other DBs
NCBI-GeneID: 127524379
NCBI-ProteinID: XP_051771758
Position
13:complement(29034310..29090658)
AA seq 2779 aa
MRKCARIFTINKGTRNSSMEKEWRLLGFLVLSLCFLVSNGQKRVCTQETVADIVFLVDGS
TSIGLENFQQIREFLTFLIQTFEVAHDRIRIGLVQYSDTPNTEFSLNTYQKKEEILNYIQ
NLHYKTGGTYTGLGLDFMLEKHFVEKAGSRAQQNVPQIAVVITDGDSLDEVESHAQELRD
RGIKIFAIGIKDANETLLRQIANEPYDQHVYSVSDFAALQGISQSVIRELCNTVEETHKE
VIRMSKGCNETAQADIVLLVDSSGSIGDSDFEEVRKFLHAFVEQFNLRPDKVRVGLAQFS
DRPYPEFLLGDYIDKKDLHQKLNAFIYRGGGTNTGQALTFIRENYFSLARKNVPGIAIVI
TDGESQDAVQEPAQRLRNMGVAIFVIRVGMGNMEKLRTIANVPHEEFLFSIDSYQELQGL
KVSLRNKVCFTVEIQSQAFVKKFADLFILVDSSASKQEQQTIRNFLYRLVNQLEVGKNAN
RVSLAQFSEDVKEEFLLNTDKTKNEMVSFIRNLQLRPTGERRIGHAIEYAHTHFLNSTAG
SRVSEGFKQFLLVISAGESADGVVQASRTIKEDAVTVFAVGLNKADPFEMKDISSPQHSY
KLVGNVPQVQQKLKSAIDTWEDAAVTEECAFDVVADIAFIVDQSSSIRSKNFQLVRDFLE
NTIGGLDVGEGKIKVAVILYSDFPRADVYLDTFNDKADILRYISSMAYGRGKTYTGAALR
FAKEHVFTKARGSRRDEHVQQVAVVITDGKSTDDAASAAADLRRSGVTVFALGIKDAKED
DLREIASYPPKKFVLNVERFDQLNSLAKILTKTLCNEITDAIIPKFSFRAVSKGCKQTVK
ADIYFLVDESGSIDPADFEDMKKFIIEWLDVFEIGNDYVRIGVVKFESRATTVFRLHNYS
TKTDVKKAVKDLKMKGGGTRTDLGLREMIPLFKEAVQTRGEKVRELLIVITDGESIGTEE
PVEVPAKELRTEQNVTIYAIGVKTASVPELELISGSPQRTFYVKNYDFLKDIKKDILTDI
CSFEGCEGLFADVVFLIDGSESVSADDFEKIKRIMENVIEKFAIGPEKEHVGVVQYGTNT
KEEFSLNTFDDKATLLEEIRNIRQMNGKTYTGKALTEVLQSFDKSKGGRSTALKFLIVLT
DGDSRDDVAQPAKVLRDKSINIKAIGMRHANRSQILAIAGSHEGVFFEDAVASLKELSSD
VLLKICNTECKTPELIDIIFLVDASGNPNKDGFQEFISLMTHVVNKSVVGERRVRFGAIT
YSDSPQSEFTLKQYKSQADVRRVISNLKPSGGRRNTARALKYTLSYFDETHGGRRAKNVP
QVLFLITDGKVNDLSGLEGWPESLAKSEVNFFAIGTEDADEDQLREMAGEKGRVHYASTY
QDLRGRQKTITQELCNLTKPICEMEVSDLVFLIDGSETIKEPSWYILKQTMIGIVKELDI
AQDKWRVGVAQFSDILLHQFYLNTYTSFAEVKQAINNIKQRKQGTHTWDALKLIRQYFTK
ENGSRIDEGVAQNLLLITDGEATDEKDLNALAYLRNKKITITVIGVGNEIKKSELREIAG
SPDRVLIETFESLKLKTTIKKVLNFLCNDSEIPDPPSNDCSIDVAFGFDVSRQSTQPLLR
RQVEPIVTAAIHSISMMGDLCCVKVDNIKTRFGYRLVSGRNGRVLDNFSFEKYNEDVVRK
VMLLRPTEPLAFNEFLLDSFKEMFVVSKAKAKVLIIFTDGLDDSIQRLMASSERLKQSGV
DTLLIVSLEGIMDVHQLEFGRGFSYMQPLTINMLNLGNALMKQIETVALRKCCDVPCSCT
GVPGPRGPPGSLGQKGSSGQKGHPGFPGDEGSMGERGPPGLNGTQGHNGCPGNRGIKGQR
GYNGNKGEDGEDGLDGVEGEQGDAGLDGLPGPKGDPGSAGMKGFKGSPGTKGHSGLRGDP
GAPGIDNNNSGPKGERGDTGLPGDQGPFGLPGRPGDNGDPGAPGRKGPLGFPGESSNEKG
EAGQPGPPGYPGQVGPPGGNGAPGEGGHSGVPGIPGPFGPSGAKGSKGGRGPRGPRGLPG
DAGIKGALGPEGFKGPPGQDGRDGYGPAGPKGRKGNNGYFGLPGLQGEDGTKGSSGNKGH
KGYRGTRGNAGRPGMPGAPGENGMDGHRGEKGLPGISPMPECDLVEYIRKNCACCAGNRF
QCPVYPTDLVIALDMSVGVSSEVFERMRSAALSLLEDISIAETNCPRGARVSVISYNSES
RNLIRFADHHKKKTLLEALRTIAVERTTKNRDLGQAMLFVARNVFKRARKGRLMRKMAVF
FTNGPSNDESRLATAMLEFKAADIGLGVIALQPADGVSRAMQVDDTRSYIIVDGRGVNRI
KKCLICFDRCKPDPECGVILRPQPLQMDLDLSLLLDASNNLNTQQYSDAKELLLSLLDRI
GVSNEPSRADRKTRLAVYQQSSVYGSSYLNEEFSFTKFKERNIMKRHITSRVKQVGGTSH
PEFALEWLITNIILKAERPRSKRMVVAVFGENSEHSKAQLDYLSRLCKCHNVVMFVLMAG
HRFDWNRMQELTNSPLEQHLVFLDDREYATRFVYAFLHMFHRGILPQLLIETRDCRGFVP
RPVGFGQGTTERDILQTYAPIEGSTEGPTEWLITEEPLEEYDVYDQQNEEPIADPNQLDY
TEHFTEDHTEPPKTEAARCFLERDSGRVCASYVSRWYYSQKTKICMHFWYGGCDGNENRF
LTEEECFRECGSSDICQLEYDTGTCSNFAVKWHFNASSGECAQFWYGGCEGNSNRFDTQE
DCENRCFRAKKVSLNISKL
NT seq 8340 nt   +upstreamnt  +downstreamnt
atgcgaaaatgcgcaagaattttcaccataaataagggaacaaggaactcaagcatggag
aaggagtggagattacttggcttccttgttctgtcattatgttttcttgtcagcaatggc
caaaaacgtgtctgtacacaggagactgtggctgacattgtattcctggtggatggctct
accagtattgggctggaaaacttccaacaaatccgtgaattcctcacttttctcatacag
acctttgaagttgctcatgacaggatcaggatcggtctggttcagtacagtgacacaccg
aatactgagttttcgctcaacacttatcagaaaaaagaggaaattctcaactacatccaa
aatctgcattataaaaccggcgggacatataccggcctgggtttggacttcatgctggaa
aagcattttgttgaaaaggccggaagtcgagcacagcagaatgttcctcagattgccgtt
gttatcacagatggtgattctctagatgaggttgagtcacatgctcaggagctgagggac
aggggaataaaaatattcgccatagggatcaaagatgcaaacgaaacgttactgagacag
atcgcaaatgagccatatgatcagcacgtctacagcgtatcagactttgcagctctgcag
ggaatttctcagagtgtaatccgggaactgtgtaacactgtagaggaaacacacaaagag
gtcatcaggatgtcaaaaggttgcaacgagactgcacaggcagacattgtgctcctcgtg
gactcgtctggtagcattggagacagtgattttgaagaagtgaggaagttcctccatgct
tttgtggaacaatttaaccttagacctgacaaggtgagagtgggacttgcccagttcagt
gacagaccatacccagagttcttacttggtgattatatagataagaaagacctgcaccaa
aagttgaatgctttcatctaccgtggaggaggcaccaacaccggtcaggccctgactttc
atccgtgagaattactttagcctggccagaaagaatgtccctggcattgctatagtcatc
acagatggggaatcacaggatgctgtacaggaacctgcccagagactacgaaatatggga
gttgccatctttgtcatcagggtgggaatgggcaacatggagaaactgcgcaccattgct
aatgtcccacatgaagagttcttattcagtattgacagttatcaagaactgcaaggtcta
aaagtgagtctacgcaacaaagtgtgctttaccgtggagatccagtcacaagcttttgtg
aaaaaatttgctgatctcttcatactggttgatagttcagcatctaaacaagagcagcaa
acaataaggaatttcctctatagactggtcaaccagctggaagtggggaagaatgctaat
cgtgtcagcctggctcagtttagcgaagatgtcaaagaggaattcctgcttaatactgac
aagaccaagaatgagatggtgtcatttattcgcaacctgcagctgaggcctacaggggag
cgtagaattggccatgccattgaatatgcccacacacatttcttgaacagcactgctgga
agccgtgtctctgaagggtttaagcagttcctgttagttatctctgctggagaatccgct
gatggtgtcgtccaagcatcccgaacaatcaaagaagatgcagtgacagtttttgctgtt
ggcttaaacaaagctgatccgtttgagatgaaggacatctctagtccacagcacagctac
aagttagtaggtaatgttccacaagtgcaacagaaacttaagtctgccattgacacatgg
gaagacgctgccgtcacagaggagtgcgcgtttgatgtggtggcggatatcgcttttatt
gttgatcagtccagcagtatcagatccaaaaacttccaacttgtgcgtgactttctcgag
aacaccatcggaggtctcgatgtgggcgagggaaaaataaaggtagctgtgatcctctat
agcgactttcctcgagctgatgtgtacttggacaccttcaatgataaggctgacatcctg
cgctacatcagtagcatggcgtatggtcgtggtaaaacatacactggagctgctctcagg
tttgccaaagagcatgtgttcaccaaagcaagaggcagcagaagagatgagcatgttcag
caggttgctgttgttattaccgatggaaagtccacagatgacgcggccagcgctgcagca
gatttgcggcgatcaggcgtcactgtatttgcgcttggtatcaaagacgcaaaagaggat
gacttgagagagatcgcatcctacccacccaagaagtttgtgttaaatgtggaacgcttt
gatcaactaaattcacttgcgaagattttaaccaaaacactttgcaatgaaatcacagat
gccatcatacctaaattctcattcagagcagtatcaaaaggttgcaagcaaacagtcaaa
gctgacatatacttccttgtggatgaatcaggaagtatagaccctgcagactttgaagat
atgaagaaattcattattgaatggcttgatgtgtttgagattggaaatgactatgtgcgc
attggggtggtgaagtttgaaagccgtgcaaccacagttttccgattacacaactatagc
acaaaaactgatgtcaaaaaggcagtgaaggatcttaaaatgaaaggagggggcaccaga
actgatctggggttaagagaaatgataccgctattcaaagaagctgtacaaacacgtggg
gaaaaggttcgtgagctgctgattgtaatcacagatggagaatcaatagggacagaagag
ccggtagaagttcctgctaaagaactgagaacagaacagaatgtcaccatttatgctatt
ggtgtgaaaaccgcatctgtgcccgagctggaattaatatctggcagcccacaaaggacg
ttttatgtcaaaaactatgattttctcaaggatattaagaaagacatccttacagacata
tgttcctttgaaggttgtgaaggtctttttgcagatgttgtcttcctgatcgatggatca
gaaagtgttagcgctgatgactttgaaaagattaagcgcataatggagaatgtgatagaa
aagtttgcaattggaccagagaaggagcatgtcggagttgttcagtatggtacaaacaca
aaagaggagttttccttaaatacatttgatgataaagctacattattagaggaaattaga
aatatcagacagatgaatggaaaaacttacactggaaaagcactcacagaagtattgcaa
tcttttgacaagtctaaaggaggacgctccactgccttgaagttcttgatagttcttaca
gatggagatagtagggatgatgtagcccaacctgcgaaagtcctgagagacaaatccatc
aacatcaaagccattggtatgagacatgcaaacagatctcagattcttgccattgctgga
tcccatgaaggtgtgttctttgaagacgcagttgcttccctgaaagaattaagcagtgat
gttcttctcaagatctgtaacacggaatgcaagacacctgaactgattgacataatcttc
cttgtggatgcctctggtaatcccaataaagatggtttccaggaatttataagcctaatg
acacatgtggtgaacaaatctgtggttggagaaagacgggtacgatttggcgccatcacc
tactctgacagccctcaatcggagttcaccctgaaacagtacaaaagtcaggctgatgtt
cggagggttatctcaaacctcaaaccttcagggggaagaagaaacacggcccgggccctt
aaatatacactctcctactttgacgaaacacatggtggacgacgggcgaagaatgtaccc
caagtgctgtttctgattacagatggcaaggttaatgacttgagtggactggaaggatgg
cctgaatccctggcaaaatcagaagtcaacttttttgctattggtactgaagatgccgat
gaggaccagctaagggagatggcgggagagaaaggaagagtgcactatgcaagcacctac
caggatctgcgcggacgacaaaaaacaatcacccaagagctctgcaatcttaccaaacca
atttgtgagatggaggtatcagaccttgtttttttaattgatggatcagagactattaag
gaaccaagttggtatattctcaaacaaaccatgattggcatcgtgaaagaactggatatt
gctcaagacaagtggcgagtgggtgtcgcccagttcagcgatatactcttgcatcaattt
tacctgaacacatacactagttttgcagaagtgaagcaagctataaacaatattaagcaa
cgaaagcagggcacacatacttgggacgccctgaaattaattagacaatacttcacaaaa
gagaatggatccagaatagatgaaggagtcgctcagaatctcctgctgatcacagatgga
gaagctactgatgaaaaagacttgaatgcattggcttatctcagaaacaagaaaataaca
ataactgttattggggttggcaatgaaataaaaaaatctgagctgcgtgaaatagctgga
tcacctgaccgggtcctcattgagactttcgaaagccttaaactgaagacaaccataaag
aaagtgttaaatttcctctgtaatgactcagaaataccagatcctcccagtaatgattgc
agtattgacgttgcctttgggtttgacgtgtccagacaatcaacacagcctctgttgaga
cgtcaggtggaaccgatagttactgcagccatccacagtatctccatgatgggtgatctg
tgctgtgtcaaagtggacaacattaaaactagatttggctataggctagtgtctggacga
aatggcagagttctggataattttagctttgagaagtacaacgaggatgtggtcaggaaa
gtgatgttactgcgacctacggagcccctggccttcaacgagtttctgttagattccttc
aaagaaatgtttgtcgtctccaaagctaaggcaaaggttttaataatcttcacagacggt
ttggatgatagcattcagcgtttaatggcgagttcagagagacttaagcaaagtggggtc
gatacactgctgattgtgtctttggagggaataatggatgttcaccagctggaatttggc
agaggtttcagctacatgcagccactgaccatcaacatgctgaatttaggcaatgctctt
atgaaacagattgaaacagtggcgctgaggaaatgctgcgatgtgccttgttcatgcact
ggtgtacctggaccacgaggaccgcctggaagtctgggtcaaaagggatctagtggtcag
aagggtcatcctggatttccaggagatgaaggtagtatgggagagcgaggaccaccaggg
ctgaatggaactcagggacacaacggttgccctggaaacagaggaatcaagggccagcga
ggctacaatggaaataaaggagaagatggggaggacgggctggatggagtggaaggagaa
cagggcgatgctggtctagatgggcttccaggacctaaaggagacccgggcagtgctggt
atgaagggtttcaaagggagtcctggaactaagggacacagcggtctgagaggagatcct
ggagcaccaggaatagacaacaataattcaggtccaaaaggcgagagaggagatactggg
ctcccgggtgaccaggggccttttggactcccaggcagacctggagataacggtgatcct
ggtgctccaggaagaaaaggcccactaggattcccgggtgaatcttcaaatgaaaaagga
gaagctggacagccagggcctcctggttaccctggacaagtgggaccaccaggtggaaat
ggggctccaggagaaggtggtcattcaggtgtacctggaattccgggtccctttggtcct
tctggagctaaaggttcaaagggaggtcgaggacccagagggccaaggggtctaccaggt
gacgcagggatcaagggagcgctggggccagagggattcaaagggcctccgggacaagat
ggaagagatgggtatggacctgctgggcccaaaggacgcaagggaaacaatggatacttt
ggcctccctggtttgcagggtgaggatggtaccaaaggatccagtggaaataaaggacac
aaaggttatcgaggaacacgggggaacgctggtcgtccgggtatgccaggtgctccggga
gaaaatgggatggacggacacaggggtgaaaaaggacttcctggaatcagtccgatgcct
gaatgtgacctggtcgaatacatacgcaaaaactgcgcttgctgcgctggaaaccgtttc
cagtgtccagtttaccccacagacctggtgatagccttggacatgtctgtaggtgtatct
tctgaagtgttcgagcggatgcgttctgctgctctctccttactggaagacatttccatt
gcggagacaaattgtccacggggagctcgggtgtctgtgatctcctacaacagcgagtcc
aggaacctgatccgtttcgcggaccaccataagaagaagacccttctggaagctctaaga
acaatcgctgtagagagaactacaaaaaacagggacttaggacaagccatgctgttcgtg
gcacggaacgtcttcaaacgagccagaaagggcagacttatgaggaagatggctgtgttc
ttcacaaacgggccatcgaatgatgaatcaagactcgccacagcaatgctggagttcaag
gcggcagacattggcctcggagtgatcgctttacaacctgctgacggtgtgagccgagca
atgcaggttgacgacacgagaagctacattattgttgatggcagaggagtgaatcgcatt
aagaagtgcctcatatgttttgatcgttgtaaaccagacccagagtgtggtgtaattctg
cggccacaacctctacagatggacttggacctgtctttgctgctggatgcgtctaataac
ctgaacacccaacagtattcagatgcgaaggagcttcttctgtctctgttagaccggatc
ggcgtgagcaacgagccgagcagagcggacaggaaaaccagattggccgtctaccagcag
agctctgtttatggctcctcttacctcaacgaggagttcagcttcactaaatttaaagaa
cgcaatatcatgaagcggcatattactagtagagtgaagcaagtgggcgggacatcccat
cctgagtttgctttggagtggctgattactaacattatccttaaagcagaaagaccacga
agcaaacgaatggttgtggctgtttttggtgaaaactctgagcacagcaaagctcagctt
gattatttgtctagattatgtaagtgtcacaatgttgttatgtttgtcctcatggcggga
cacagattcgactggaaccggatgcaggagctcaccaactctcctctggagcaacacctg
gtattcctggatgacagagagtacgccacacgctttgtttacgccttcctgcatatgttc
cacagaggaatcttgccccagttactaatagagacccgtgattgtcgtggttttgtgccg
aggcctgttggatttggacaaggaaccacagagagagatattctgcagacttatgcgccc
attgaagggtccaccgaagggcccactgaatggctcataacagaagaacctctggaggaa
tatgatgtttatgatcagcaaaatgaagaaccaattgctgatcccaatcaacttgactac
actgaacattttacagaagatcacaccgagcctccaaagactgaagcagcacgatgtttc
cttgagagagattctggccgtgtgtgtgcctcgtatgtgtccagatggtactacagccag
aagactaagatatgcatgcacttttggtacggtggttgtgacggaaatgaaaaccgattc
ttgacagaggaagagtgctttagggagtgtgggtcctcagacatttgccagcttgagtat
gacacaggaacttgctcaaactttgcagtgaaatggcacttcaacgccagcagtggtgaa
tgcgcccagttctggtatggcggctgtgaagggaacagcaaccggttcgacactcaggag
gactgtgagaatcgttgtttcagagccaaaaaagtatctcttaacatatctaaactgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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