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KEGG   Cottoperca gobio: 115025988
Entry
115025988         CDS       T07513                                 
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(VI) chain-like
  KO
K06238  collagen type VI alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115025988
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115025988
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgob04147]
    115025988
   00536 Glycosaminoglycan binding proteins [BR:cgob00536]
    115025988
Exosome [BR:cgob04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115025988
Glycosaminoglycan binding proteins [BR:cgob00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   115025988
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   115025988
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 Kunitz_BPTI fn3 Ig_DSCAM-DSCAML_C
Other DBs
NCBI-GeneID: 115025988
NCBI-ProteinID: XP_029314302
UniProt: A0A6J2RXV8
Position
21:complement(4392528..4418273)
AA seq 3144 aa
MLILLNGGRSFDNVDTPASALKQQGIFVIGIGTRSSDSGELKKISYDPRYALSVSEFTDL
PSVQEQLSSVMSTVLVRATPMTPKETVERQPPGRDVVFLLDGSDGTRTGFPAMQDFVQRI
VEKLRVDDNQDRVSVVQYSRDPAVNFYLNTYTTKGEILDTVRGLRHKGGRPLNTGAALQY
LRDNVFTASAGSRRLEGVPQVLILLSGGRSFDSVDAPASALKQLGVLTFAIGTRSSDSRE
LEKISNDPNYVLSVSEFTDLPSIQQQLQSSVEAVVIEDTPETPTVLVDTAKKDIVFLLDG
SDSTRNGFPAMRDFVERVVEKLNVGGNKDRVSVVQYSRDAEVNFYLKTYTTREDIVDSVR
GIKHKGGRPLNTGAALQYVRDNVFTNSSGSRRLQGVPQMLILLNGGRSFDNVDTPASALK
QQGIFVIGIGTRSSDSGELKKISYDPRYALSVSEFTDLPSVQEQLSSVMSTVLVRATPMT
PKETVERQPPGRDVVFLLDGSDGTRTGFPAMQDFVQRIVEKLRVDDNQDRVSVVQYSRDP
AVNFYLNTYTTKGEILDTVRGLRHKGGRPLNTGAALQYLRDNVFTASAGSRRLEGVPQVL
ILLSGGRSFDSVDAPASALKQLGVLTFAIGTRSSDSRELEKISNDPNYVLSVSEFTDLPS
IQQQLQSSVEAVVIEDTPETPTVLVDTAKKDIVFLLDGSDSTRNGFPAMRDFVERVVEKL
NVGGNKDRVSVVQYSRDAEVNFYLKTYTTREDIVDSVRGLKHKGGRPLNTGAALQYVRDN
VFTNSSGSRRLQGVPQMLILLNGGRSFDNVDTPASALKQQGIFVIGIGTRSSDSGELKKI
SYXPSLCSIVSEFTDLPSVQEQLSSVMSTVLVRATPMTPKETVERQPPGRDVVFLLDGSD
GTRTGFPAMQNFVQRIVEKLRVDDNQDRVSVVQYSRDPAVNFYLNTYTTKGEILDTVRGL
RHKGGRPLNTGAALQYLRDNVFTASAGSRRLEGVPQVLILLSGGRSFDSVDVPASALKQL
GVLTFAIGTRSSDRRELQKISHDPSFALSVSEFTDLPSIQQQIQSSVEGAIIGFSPESPA
ETQGPRKDVVFLVDGSDGVGREFPIIQEFIRRVVESLNVGENKIRIGVVQYGDFAQTDMF
LNTHTTKEGVLNAVRGMRQRGGRQRNLGQALQFVSQDVLTAARGSRKQEGVPQFVIVVSS
GSSTDDISSAASSLKQSRVLPFSIGTRDVNPTELQVVSYIPNFAFSVDDLPGLYTVQENL
ITTLTELSDDDINRMRPVFPIIDVIPSVATGGEKRDVVFLIDGTTAMRSEFPSIREMIRR
VVDELDVGLDKVRISVVQYSDDAKPEFLLNGLSTKDEVRNAVMKLRSKGGNRLNTGRALE
WVYSNIYQRSAGSRIEEGVPQFLILVTGGKSSDDVSTAADQLKRNRVAPLAIGSRNADPD
ELKQISLRPDLVYTVDSFQQLPMMESQLIDSVKTISTTDIINTYVTSTVDLGNVNLGRKD
IIFLIDGSDNTGAAGIAHIRDFIHNIVQQLDVQPDQVRVAVVQYADRVQPEFSLNTHNDK
SAVVSAVKRLRQMGGRSSDLADAIEYVIKNELKPSAGVRLAKASQHLVVLTGGRSPQDVS
IYGPLLKGSRVNCIGVGAAGADTRQLTQIATTSADVLQVPDFTGLPTIRQEVIDRLNGTI
TEEPPTDYIPSGLPPPKNADIVFLVDGSINLGRDNFNAVMLFINELIDLFFNERDNLRIG
FAHYTTDVTDVFYLNTYKNKQDIVNAIGRTEYKGGRKINTGAAIRHIQDVHFTKEKGSRM
DEGTPQILMVLTGGRSADDGKTAALGLKKKGVRVYAVGVGDIENELEDLASESSTVARAS
TYLKLSELNEQILETLDDEVKGRLCVSVQETSKTCNIEVLVGFDVSAQNIFSVQTNFKIK
MEAILSTISKMAAISCSSGQIPSVQIGMLAMDSASEPVQLDFTENAEVLFKAFEALRSSG
PFVLNGKTISAYTNRFKTRQKDVVKVVVHLTDGIDAPYAELKKRVDELRLSGVNSFILVG
LERVPKFEEALLLEFGRGFRYTRPLRLNILDLDYELMEELDNIAERECCAVPCKCTGTRG
NRGAVGLSGSKGGPGSPGSQGHPGDEGGPGERGHPGVNGTQGFQGCPGQRGVKGSRGYSG
EKGEFGEIGLDGINGPEGKSGVAGPSGDLGNSGRRGPKGTKGQSGGIGEMGIRGDPGTSG
QDNSRAGPKGDPGDAGPAGEPGEDGKKGGPGEVGRIGANGRRGPPGKAGNPGKTGADGVQ
GEAGIGGSRGPSGPNGAPGPRGEDGNPGPRGPGGSPGSAGDKGRRGALGRKGEPGDSGPK
GVIGPLGPRGEPGEDGRDGFGVIGSNGRKGDEGFPGFPGIKGAAGDSGTTGGPGPTGNHG
QRGVSGNIGTPGQEGEVGHPGPYGEKGPRGPGVVQCDLVKKIRDNCPCCYGQQECPLYPT
ELAFVLDASEGVDQPAFNNMRDTVLRLVKDITISESNCPRGARVAVTLYNDEVTTEVRFA
DAMKKRALVQRIEGLQTLKTSKQRSLETAMSFVAQNTFKRVRSGFLIRKVAVFFVGGTVS
RVQAVTNAALRLHDAGIATLFLVNRDDRTLSKAVQVNNTALAQIIVLPNPGSAQYDSLIQ
KVMNCHVCLDVCSPDQVCDYLPPSGSRLRRTSTTDVDIDMAFVMDSSESTYPTVFTEIKR
YIAHIVEQLQVSSNPTSSIHHARVSVIQQAPYEFLNNKTGSSIRVDIGLTEHHSAQDIVK
FLLEKTPQLEGGRALAAAIESTVEQVFEKAPLQRDRKVLMLFVTGSVEEEEEQLVRIATE
VKCRGYFLVILGVGEKLSAGDARVLSRMASEPSDVFFKRLDSASHFYDKHIQTFGQLLPK
YISIENAFYMSPEVSKNCKWFQSDQPLKNPFSSSHQQEKHQKPHENQQAVHQRKHNDADE
LHVSNVTSSSLKLRWTSSDSKLFVYFEVVVTRLHDHALVLKTNVSGSELSVDNLESAQTY
HAVVTAHTAEGQTVSIRKGIMTTKAAEHKPASRGSSTVNTTPLDQPETVPESQPKVEQQV
EQVEILPDPAASTAVDICQLLKEEGTCAKFVLKWHFDALSKSCTRFWYGGCGGNQNRFDT
HQQCVKACGKPEPLNQGVVAAIRT
NT seq 9435 nt   +upstreamnt  +downstreamnt
atgttgatcctgctaaatggtggaaggtcttttgacaatgtagataccccagcttctgct
ctcaaacagcagggcatctttgtgattggcattggaaccaggagctctgacagtggagag
ctgaagaagatatcatatgaccctcgttatgctctatcagtgtctgagtttactgacctc
cccagtgtccaagaacagctctcgtctgtaatgagcacagtgttagtgagagctacgccc
atgacaccaaaagaaactgtggagagacagccaccaggaagggatgttgtgttcttgttg
gatggatctgatggtactagaactggattcccagctatgcaagactttgtccaaagaata
gtagagaagctcagagtggatgacaaccaagaccgtgtttcagtggttcagtacagcaga
gatccagctgtcaatttctatctgaacacatacacgacaaaaggcgagatccttgacact
gtcagaggtttgaggcacaaaggcggaagacccctcaacactggagcagctctccagtac
ttgagggataatgtcttcacggcctctgccggaagcaggcgcctggaaggagttccacag
gtcctgatattgctaagtggtggaaggtcttttgacagtgttgatgcaccagcctctgct
ctcaaacaactgggtgtcctgacctttgcaattggaaccaggagctctgatagtagagaa
ctagagaagatatccaacgatcccaattatgttctatctgtgtctgaattcactgacctt
ccaagtatccaacagcaacttcagtcctcagtggaggctgtggttattgaagacacccca
gaaacaccaactgtacttgttgacactgccaaaaaggatattgtattccttctggatggt
tctgatagcacaaggaatggcttccctgccatgcgtgattttgttgagagagtggtggag
aaactcaatgtgggagggaacaaagaccgtgtctctgtagtgcagtacagcagagatgca
gaggtcaatttctacctgaaaacatacaccacaagagaggatattgtggattcggttaga
gggataaaacacaaaggaggcagacccctcaacaccggggctgccctccaatacgtcagg
gataacgtctttacaaactcctccgggagtaggcgcctgcaaggtgttccacagatgttg
atcctgctaaatggtggaaggtcttttgacaatgtagataccccagcttctgctctcaaa
cagcaaggcatctttgtgattggcattggaaccaggagctctgacagtggagagctgaag
aagatatcatacgaccctcgttatgctctatcagtgtctgagtttactgacctccccagt
gtccaagaacagctctcgtctgtaatgagcacagtgttagtgagagctacgcccatgaca
ccaaaagaaactgtggagagacagccaccaggaagggatgttgtgttcttgttggatgga
tctgatggtactagaactggattcccagctatgcaagactttgtccaaagaatagtagag
aagctcagagtggatgacaaccaagaccgtgtttcagtggttcagtacagcagagatcca
gctgtcaatttctatctgaacacatacacgacaaaaggcgagatccttgacactgtcaga
ggtttgaggcacaaaggcggaagacccctcaacactggagcagctctccagtacttgagg
gataatgtcttcacggcctctgccggaagcaggcgcctggaaggagttccacaggtcctg
atattgctaagtggtggaaggtcttttgacagtgttgatgcaccagcctctgctctcaaa
caactgggtgtcctgacctttgcaattggaaccaggagctctgatagtagagaactagag
aagatatccaacgatcccaattatgttctatctgtgtctgaattcactgaccttccaagt
atccaacagcaacttcagtcctcagtggaggctgtggttattgaagacaccccagaaaca
ccaactgtacttgttgacactgccaaaaaggatattgtattccttctggatggttctgat
agcacaaggaatggcttccctgccatgcgtgattttgttgagagagtggtagagaaactc
aatgtgggagggaacaaagaccgtgtctctgtagtccagtacagcagagatgcagaggtc
aatttctacctgaaaacatacaccacaagagaggatattgtggattcggttagagggcta
aaacacaaaggaggcagacccctcaacaccggggctgccctccaatacgtcagggataac
gtctttacaaactcctccgggagtaggcgcctgcaaggtgttccacagatgttgatcctg
ctaaatggtggaaggtcttttgacaatgtagataccccagcttctgctctcaaacagcag
ggcatctttgtgattggcattggaaccaggagctctgacagtggagagctgaagaagata
tcatactgaccctcgttatgctctatcgtgtctgagtttactgacctccccagtgtccaa
gaacagctctcgtctgtaatgagcacagtgttagtgagagctacgcccatgacaccaaaa
gaaactgtggagagacagccaccaggaagggatgttgtgttcttgttggatggatctgat
ggtactagaactggattcccagctatgcaaaactttgtccaaagaatagtagagaagctc
agagtggatgacaaccaagaccgtgtttcagtggttcagtacagcagagatccagctgtc
aatttctatctgaacacatacacgacaaaaggcgagatccttgacactgtcagaggtttg
aggcacaaaggcggaagacccctcaacactggagcagctctccagtacttgagggataat
gtcttcacggcctctgccggaagcaggcgcctggaaggagttccacaggtcctgatattg
ctaagtggtggaaggtcttttgacagcgttgatgtaccagcctctgctctcaaacagctg
ggtgtcctgacctttgcaattggaaccaggagctctgatcgcagagaactgcagaagata
tcccacgatcccagttttgctctatctgtgtctgaattcactgaccttccaagtatccaa
cagcaaattcagtcctccgtcgagggtgctatcattgggttctctccagaatcacctgct
gagacgcagggccccaggaaggatgtcgttttccttgttgatggatctgatggtgttgga
cgggaatttccgatcatccaggagtttatccgcagggtcgtggagagtctcaatgttggc
gagaacaagatccggattggtgtggtccagtatggtgactttgctcaaacggatatgttt
ctgaacacacatacaaccaaagaaggtgttttgaatgctgtcaggggaatgaggcagcga
ggaggaagacaacgtaacctgggtcaggccttgcagtttgtcagtcaggatgttctgaca
gcagcccgtggtagcaggaagcaagagggtgtaccgcagtttgtaattgtcgtctccagt
gggtcttctacagatgacatcagcagtgcagcatcttccctcaaacaatctagagttctt
cccttcagcattgggaccagggatgttaaccctacagagctccaggtggtgtcatacata
cctaactttgccttcagtgtagatgacctccctggcctatacacagtccaagaaaatcta
ataaccactctcactgagctgtcagatgatgacatcaaccggatgcgtccagtattccca
atcattgatgtaatcccatcagtagccacaggaggagaaaagagggatgtcgtatttcta
attgatggcacaacagcgatgcgtagtgagttcccttccatccgtgaaatgataagaaga
gttgtggatgaactggatgtaggattggataaagtccgaatttcagtggtacagtacagt
gatgacgcaaagccagaatttcttctgaatggattatccaccaaagatgaagtacgcaat
gctgtaatgaaacttcgaagcaaaggagggaaccgtctaaacacaggtcgtgctcttgag
tgggtctacagtaacatctaccagaggtcagcgggaagccgcattgaggaaggtgtgcct
caattcctcattctagttacaggtggcaaatcctcagatgatgtatccaccgcagctgac
caacttaagagaaaccgggttgcacctcttgcaattggttcaaggaatgcagaccctgat
gaactgaaacagatttccctgagacctgatctggtatacacagttgacagtttccagcag
cttccaatgatggagtcgcagctcattgattcagtcaagacaatatccaccactgacatc
atcaatacttatgttacttctacagtggatttaggcaatgtaaatcttgggagaaaggac
attatcttccttattgatggctcagacaatacaggtgctgctggaattgcgcatatccgt
gatttcatccacaacattgtccaacaactcgatgtgcagcctgaccaagtgcgcgttgct
gttgtccagtatgcagacagagttcagcccgagttctcactcaacactcacaacgacaag
tcagcagttgtctctgctgtcaaaagacttcgtcagatgggtggccggtcatcagatctg
gccgacgccattgagtatgttataaagaatgagttaaaaccctctgctggtgttcgtcta
gctaaggcctcccagcatcttgtggttctcacaggtgggcgttccccccaagatgtttcc
atctatggacctctgcttaagggctctcgagtcaactgtattggtgttggagctgctggt
gctgatacaaggcagctcacccaaattgccaccacctcagctgatgtccttcaggttcct
gacttcactggcctgccgacaatccggcaggaggttattgacaggttgaatgggaccatc
actgaggaaccacctacagactatattccatcaggcctgcctccacctaaaaatgctgat
atagtgtttttggtggatggttccattaacttgggcagggacaacttcaatgcagtgatg
ttgtttatcaatgagctaattgatctgttcttcaatgagagagacaacctgcggattggc
tttgcacattataccacagatgtgactgacgtcttctacctcaacacatacaagaacaag
caagacatcgtaaatgccattggccgaacagagtacaaaggaggacgtaaaatcaacact
ggtgcagctattcgccacattcaagatgttcactttaccaaagaaaaaggtagtaggatg
gatgagggcactcctcagatcctaatggtactcactggaggacgttcagctgatgatggc
aaaacagcagcccttggtctaaagaaaaaaggtgtgagagtctatgctgtaggagtgggc
gacattgagaatgaattagaagacctagcaagcgagtcctccactgtggctagagcaagc
acctatctgaaactttcagagctgaatgagcaaatcttggagactttggatgacgaagta
aaagggaggttgtgtgttagtgtacaagaaacttctaaaacctgcaacatagaggtgttg
gtgggttttgatgtttctgcccagaacattttcagtgttcagaccaacttcaaaatcaag
atggaggccattctgagtacgatttccaaaatggcagctatcagttgctcatctgggcag
attccctccgtgcaaattggcatgttggccatggactctgcctctgagcctgtccagctg
gacttcaccgaaaatgctgaggtactctttaaggccttcgaagccctacggagtagtggc
ccctttgtccttaatggaaagaccatctcagcgtacaccaataggttcaaaaccaggcag
aaggacgttgtcaaggttgtcgttcatctgactgatggtattgatgccccatatgctgaa
ttaaaaaagcgagttgatgagcttcggctctcaggagtgaacagtttcatcctggttggg
ctggagcgggtgcccaaatttgaggaggctttgctgctagaatttggtcgtggattcagg
tacaccagacccctgcgactcaatatcctggacttggactatgagctaatggaagagctg
gacaatattgcagagagggagtgctgtgcagtgccgtgcaaatgtactggcaccagagga
aaccgaggagcagttggactttcagggtcaaagggtggtccaggatcaccaggaagccaa
ggacatcctggagatgagggtggacctggagagagaggtcatcctggtgtgaatggcact
cagggtttccagggatgtcctggacaaaggggtgtcaagggttctcgtggctactcagga
gaaaagggtgaatttggagaaattgggcttgatggcatcaacggaccagagggcaaaagt
ggagttgctggaccgtcaggagacttaggaaactctggcagaagaggtcccaaaggtacc
aaaggacaatcaggaggcataggagaaatgggaatcagaggagaccctggtacaagtgga
caagataacagccgtgcaggacctaaaggagaccccggtgatgctggaccagcgggagag
cctggtgaggatggaaagaagggaggccccggtgaagtcggaagaattggagctaatggc
agaagaggcccacctggaaaggccggaaatcccggaaagacaggagctgatggtgttcag
ggagaggcgggtattggaggatctagaggtccatctggaccgaatggtgccccaggaccc
agaggagaagatggaaacccaggacctaggggtcccggaggtagcccaggttccgctgga
gataagggtagaagaggagctcttggtcgcaagggtgagccaggagattcaggacctaag
ggtgttattggaccacttggtccccgtggagagcctggtgaagatggcagagatgggttt
ggcgtcatagggtctaatggacgaaagggtgatgagggcttcccaggattcccaggaata
aagggagcagctggggactccggcaccacgggcggacctggacccacaggaaatcatggt
cagaggggtgtctctggtaatattggtacacccgggcaggagggagaggttggacatcct
gggccatatggtgagaaaggaccgagaggaccaggtgttgtgcaatgtgacctggttaag
aagatcagagataactgcccttgctgttatggtcagcaggaatgcccgctctaccccact
gagctggcctttgtcctggatgcctctgaaggcgtagaccaaccagctttcaacaatatg
cgtgacacagtcctgcgtctagtcaaagacatcaccatctctgagagtaactgtccaaga
ggtgctcgtgttgctgtaaccctgtacaacgacgaagtgaccactgaggtccgctttgct
gatgcaatgaagaaacgtgccctggtgcagcgcatcgagggactgcagaccctgaaaacc
agcaagcagcgcagcttggagacagcaatgagctttgtggcccaaaacacctttaagaga
gtgcgcagtggcttcctcataaggaaggtggccgtcttctttgtcggtggaacagtcagt
cgggtacaagcagttactaatgcagctcttcgcctccatgatgctggaatcgccaccctg
ttcttggtcaaccgtgacgacagaacactcagcaaagcagtgcaggtcaacaacacagca
ctggcccagataattgtccttcccaaccctggaagtgcacagtacgattctctcatccaa
aaggtgatgaactgccatgtctgcctagacgtctgctctccggaccaagtctgcgattat
ttgcccccgtctggcagccgtcttaggaggacttccaccacagatgtggacatcgacatg
gctttcgtcatggacagctctgagtctacctacccaaccgtctttactgagattaaacgt
tacatcgcgcacatagttgagcagctgcaagtgtcttcaaatcccacatcatccattcac
cacgccagagtgtctgtgatccagcaagcaccatatgagttcctcaacaacaaaactggc
tcttccatccgtgtggatatcggtttgaccgagcaccactcagctcaggatattgtcaaa
tttctgctagagaagacgccgcagttagagggtggccgggcactggcagcggctatcgaa
tcgaccgtggagcaggtgtttgagaaggcgcctctccagcgtgacaggaaagtactgatg
ctctttgtgacaggaagtgtggaagaagaagaagagcagctggtgcgtattgccactgag
gtcaagtgcagaggctacttcctggtcatcctgggtgtgggtgagaagctgagtgctgga
gacgctcgtgtcctgtcacgcatggccagtgagccatccgatgtcttcttcaagcggctg
gacagcgcctcacacttttatgacaaacacatacagacctttggccagctgctgccaaag
tatatcagcattgaaaatgctttctacatgtcccctgaagtgtccaaaaactgcaagtgg
ttccagagtgaccagccactcaaaaacccattttcatcatcacatcaacaggagaaacat
cagaaacctcatgaaaaccaacaggcagttcatcaaagaaagcacaatgatgcagatgag
ctacacgtctctaacgtcacctccagcagcttaaagttgcgttggaccagctcagactcc
aagctcttcgtctactttgaggtagtggtgacgcggttgcacgaccatgccttggtgctg
aagaccaacgtgtcgggctcagagctctcggtggacaatctagagagcgctcaaacatat
catgctgtggtcaccgcccacactgcagagggacaaactgtctccatccgcaaaggcatt
atgactaccaaagcagcagagcataagccagccagccgaggcagcagcactgtaaatacc
acaccactagaccaaccagagactgtgccagagtctcagccaaaagtggagcagcaggtt
gaacaggtggagatcctcccggatcctgcggcctctacagccgtggacatttgccagctt
ctcaaagaggaaggtacttgtgccaaatttgtccttaagtggcactttgatgccctcagc
aagagctgcacacgcttctggtatggaggctgcggtggaaaccagaatcgctttgacacg
catcagcaatgtgtgaaggcttgtggaaaaccagaacccctcaaccaaggagtcgtcgct
gcaataagaacatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (12)   

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