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KEGG   Carassius gibelio (silver crucian carp): 128025902
Entry
128025902         CDS       T08819                                 
Name
(RefSeq) collagen alpha-6(VI) chain
  KO
K06238  collagen type VI alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128025902
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128025902
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128025902
   00536 Glycosaminoglycan binding proteins [BR:cgib00536]
    128025902
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128025902
Glycosaminoglycan binding proteins [BR:cgib00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128025902
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   128025902
SSDB
Motif
Pfam: VWA VWA_2 Collagen Kunitz_BPTI VWA_CoxE vWA_SIBA-E DUF1194
Other DBs
NCBI-GeneID: 128025902
NCBI-ProteinID: XP_052468459
Position
A13:complement(3778601..3879188)
AA seq 2823 aa
MEKEWRLLGFLVLSLCFLVSNGQNIVCTQNTVADIVFLVDGSTSIGQENFQQIREFLSSV
VENFEVAPDRIRIGLVQYTDTPYTEFTLNTYQNKEEILSYIQNLRYKTGRTFTGKGLEFM
LKQHFVEKAGSRAQQNVPQIAIVITDGDSQDEVESQAQELRQRGIKIFAIGIKDANVALL
RLIASEPYDQHVYSVSDFVALQGISQSVIQKVCTTVEETQKEVILMSRGCNQTAQADIVL
LVDSSGSIGESDFQEVRKFLHAFVDRFNLRPDKVRVGLAQYSDRPYQEFLLGEYSDKGDL
HQKLNDLIYRKGRTNTGQALTFIRENYFTQAREKVPGIAIVITDGESNDDVEEPSQRLRN
QGVSIFVIRVGKGKMEKLRTISNIPHEEFLFSIDSYQELQGLKESIRNKVCSTVTLQSQA
FVSKFADLFILVDSSASRQEQQIIRNFLQRLILQLNVGKNTNRVGLAQFSENVKEEFLLN
TDKTRNEILASVRSLTLRPTGERRIGNAIEYARKNFFSTATGSRVSEGFKQFLLVISAGE
SADGVIQASRTIKEDAVTVFAVGLNKADEHEMKHISSQQHNYKLVGNILEVQQKIKFAIE
TWEVVSVARECLFDVVADITFIVDQSSSIRSNNFQLVRDFLENTIGGLDVGEGKIKIAVV
LYSDIPRADVYFNTFDDKTDILRYISSMPYGRGKTNTGAALTFAKEKVFTKARGSRRDQN
VQQVAVVITDGKSTDDAASAAAALRRSGVTVFALGIKDTEEEDLREIASYPYKKFVFNVK
DFDKLNSLSNILTRTLCNEITDSIIPTGSQSFALQGCKDTTKADIYFLLDESGSITYDEF
EDMKNFTKQWLEAFEVGNNNVRFGLVKFASRATIVFRLHDYNTKADIEKAVNALIMEGGG
TRTDLGLRKMIPLFEEAVQTRGEKVRKLLIVITDGESRATEESVEVPAKILRTEKNVTIY
AIGVKDASLPELELISGSPQRTFFVKNYDFLDEIKKDIITEICSFEGCEGLFADVVFLLD
GSESVHAEDFENMKEIMKLVIHKFAIGLDKERVAVVQYGTNTKEEFSLNTFDDKDVLLQK
ISNIKQMYGKTYTGKALTETLQSFDIPKGGRTSALKFLIVLSDGESRDDVAEPAKVLRDS
FTNIIAIGMKHANRSQILAIAGSHDRLFFEDSVASLKELSSDVLLKICNTECKTPELIDI
IFLVDSSGSPNKDGFREMTNLIKYTVSKSVVGEKRVRFGAITYSDNPHLEFTLKQYYSQT
DILRVISNLKASGGRRNTARALKYTLNYFEETHGGRRARNVGQVLFLITDGKINDVSGLA
TWPESLANSEVNFFAIGTEEADAEQLKEIVGRKGRVHYAKTYKDLHGLQKRITRELCNLT
KPICEMEESDLVFLIDGSESIHEHSWNTLKKTMIDIVKELDIAQDKWRVGVAQFSDILLH
QFYLNTYTSFAEVEEAINKIRQRKQGTSTWDALRNIRYYFTKENGSRIDEGVAQNLLLIT
DGKANDDKDMNALEYLRNKKISITAIGIGDEIKKSELREIAGSADRVIIETFEGLELKTT
IRKVLHLLCKDTRPLPQPPHDCDIDIAFGFDVSRRTSTQTLFRPQVEQLVSAAIHRISMM
GDLCCIVKDKITTRFGYRLVSGTDGSVLEDFGFEKYSEDVVEKVMSWRPTAPLDFNKLLL
DSFREKLASSKAKAKVLIIFTDGLDDNIQRLMASSERLKQSGVSALLIVSLEGTVDYQQL
EFGRGFSYLQPLTINMLNLGNALMKQIETVALRECCDVPCSCTGVPGPRGPPGKPGQKGY
TGQKGHPGFPGDEGSMGERGPPGLNGTQGHNGCPGNRGIKGQRGYNGNKGEDGDDGLDGV
NGEQGDAGLNGLPGPKGDPGSAGEKGFRGSLGPKGHGGVRGDPGAPGRDSTISGPKGERG
DTGLPGDQGTTGPSGRPGDNGDPGAPGRKGRPGAPGASSNAKGEAGQPGLPGYPGQVGPP
GPKGFQGVGGPPGVPGIQGPFGPTGPEGSKGGRGPRGPRGPPGDPGLKGSQGPEGFKGPL
GQDGRDGYGPAGLKGHKGNNGYFGLPGLQGEHGTKGSSGSKGHKGYRGKPGNTGRPGTEG
PPGDNGMDGHRGEKGPPGINPMPECDLVEHIRKNCPCCSGNGTQCPVYPTDLLIALDMSA
GVTPQVFQRMRSAALSLLEDISIAETNCPQGARVSVIAYNSESRILIRFTDHLKKKTLLE
AVRTLPLERTTKTRNIGQAMSFVSRNIFKRVRSGRLMRKVAVFFTNGPSRDDSSLVTAML
EFKAADIGLGVIAFSPADDVTRALQVDDTGSYIIVDGRGVSRIKQCIICFDRCNPDPVCG
VILRPPPLQMDMDMSVLMDGSDNVNTQHYANMKELLVSLLDRIDVSSEPSRADRKTRLSV
YQQSSVYGSSYINEEFSFTKYKDRNIMKRHIKDTVKQVGGTSHPDFALEWLITNVILKVE
RPRSKRMVMAVFGEDFKHNKAQLDYLSRLCKCQNVVMFILMAGQRFDRTQMEELTSSPLD
QHLVFLDDRGYGTRFAYAFLHMLHKGILPQSLIPTPDCRGFVVRPVETGPQTTESAILPT
EEPTEASTEEPTEEPTEELYEELTEEPTEEPYEELTQEPTEEPYEEPTEEPTEEPYEELT
EEPTEEPYNYYGDEQNKESFIEASQYDDTDQYRKEHRKDKKDKKEPSKAKARCFLEKDSG
RVCGSYMSRWYYSQQTKKCMRFWYGGCGGNENRFLTEDECFKECVSTESENLPKDDSSIK
DICQLILDAGTCSNFSVKWYFNVSSGECVQFWYGGCDGNSNRFNTQEDCEIRCLRDKKIS
PNV
NT seq 8472 nt   +upstreamnt  +downstreamnt
atggagaaggagtggagattacttggtttccttgttctgtcattatgttttcttgtcagc
aatggtcaaaacattgtctgtacacagaacacagtggctgacattgtattcctggtggat
ggctctaccagtattgggcaggagaacttccaacaaatccgtgaattcctctcctcagtc
gtagagaacttcgaagttgctcctgacagaatcaggattggtttggtccagtacactgac
acaccatatactgaattcacactcaacacttaccagaacaaagaggaaattctcagctac
atccaaaatctgcgttataaaaccggcaggacatttaccggcaagggtttggagtttatg
ctgaaacaacactttgttgaaaaggccggaagtcgagcacagcagaatgttcctcagatt
gccattgttatcacagatggtgactctcaagatgaggtcgagtcacaggctcaggagctg
aggcaaaggggaatcaaaatattcgccatagggatcaaagatgcaaatgtggcattactg
aggctgatcgcgagtgagccgtatgatcagcatgtctacagcgtatcagactttgtagct
ctgcaaggaatctctcagagtgtaatccagaaagtatgcaccactgtagaggaaacacaa
aaagaggtcatcctgatgtcaagaggctgcaaccagactgctcaggcagacattgtcctc
cttgttgactcatctggtagcattggagagagtgatttccaagaagtgaggaagttcctc
catgcttttgtggatcgatttaaccttagacccgacaaggtgagagtgggacttgctcag
tacagtgacagaccgtaccaagagttcctgctcggtgaatattcagataagggagacctg
caccaaaagttgaatgatctcatctaccgtaaaggacgcaccaacactggtcaggctctg
actttcatccgtgagaattactttacacaggccagagagaaagttcctggcattgccata
gtcatcacagatggggaatcaaatgatgatgtggaggaaccttcccaaagactacgaaac
caaggggtttccatctttgtcatcagggtgggaaagggcaaaatggaaaaactgcgtacc
atttctaatatcccacatgaagagttcttattcagtatcgacagttatcaagaactgcaa
ggtctaaaagaaagtatacgcaacaaggtgtgctcaactgtgactctacagtcacaagct
tttgtgtcaaaatttgctgatctcttcatattggttgatagttcagcatctagacaagag
cagcaaataataaggaattttcttcaaagactgatcctgcagctcaatgtgggaaagaat
actaatcgtgtcggcctggctcagttcagcgaaaatgtcaaggaggagttcttgctaaat
actgataagaccaggaatgagattttggcatctgttcgcagcctgacactgaggcctaca
ggggagcgtagaattggcaatgcaattgaatatgctcgcaaaaatttcttcagtactgcc
actggaagccgagtctctgaaggctttaagcagtttctgttagtcatttcagctggagaa
tccgccgatggtgtaatccaagcatcccgcacaatcaaagaagatgcagtgacagttttt
gctgttggcttgaacaaagctgatgaacatgaaatgaagcacatctctagtcaacaacac
aactacaagttagtaggtaacatcctagaagtgcaacagaaaattaagtttgccatcgag
acgtgggaagttgtgtctgttgcaagggagtgcctgtttgacgtggtggcagatatcact
tttattgtggatcagtccagcagtatcagatccaataacttccaacttgtacgtgacttt
ctcgagaacaccatcggaggtcttgatgtgggtgagggaaaaataaaaatagctgtggtc
ctctatagtgacatccctcgagcggatgtgtacttcaacaccttcgatgataagactgac
atcctgcgctatatcagcagcatgccatatggtcgtggtaaaacaaacactggagctgct
ctcacgtttgccaaagagaaagtgttcaccaaagcaagaggcagcagaagagatcagaat
gttcagcaggttgctgttgtgatcactgatggaaagtcaacagatgacgccgccagtgct
gcggcagcattgcggcgatctggcgtcactgtatttgcgcttggtatcaaagacacagag
gaggaggacttgagagagattgcatcctatccatataaaaagtttgttttcaatgtgaaa
gactttgataaactaaattcactttcaaatattttaaccagaacactttgcaatgaaatc
acagattccatcatacctacaggctcacagagctttgcattgcaaggttgtaaggataca
accaaagcagacatatactttcttctggatgaatcaggaagtataacctatgatgagttt
gaagatatgaagaactttactaagcaatggcttgaagcatttgaggtgggaaataacaat
gtgcgctttggattggtgaaatttgcaagccgtgcaacaatagttttccgattgcatgac
tataacacaaaagctgatattgaaaaggcagtgaatgccctgattatggagggagggggc
accaggactgatctggggttgagaaaaatgatcccactattcgaagaagctgtacagaca
cgtggggaaaaggttcgtaagctcctgattgtcatcacagatggcgagtcaagagcgaca
gaagagtcggtagaagttcctgctaaaattttgagaacagaaaagaatgtcaccatttat
gcaattggtgtgaaagatgcatctttgccagagctggaattaatatctggcagcccacaa
agaacattttttgtcaaaaactatgatttccttgatgaaatcaagaaagacatcattaca
gaaatatgctcctttgaaggttgtgaaggtctttttgcagatgttgtctttctgcttgat
ggatcagaaagcgttcatgctgaggactttgaaaatatgaaggagataatgaagcttgtg
atacataagtttgcaattggactggacaaggagcgtgttgcagttgttcagtatggcaca
aacacaaaggaggagttttcattaaatacatttgatgataaagatgtattattacagaaa
attagtaatatcaaacagatgtatggaaaaacgtacactggaaaagcacttacagaaaca
ttacaatctttcgacattcctaaaggaggacgcaccagtgctttaaagttcttaatagtt
ctttcagatggagagagtagggatgatgtagccgagcctgctaaagtcttgagagacagt
ttcaccaacattattgccattggtatgaaacatgcaaacagatcacagattcttgccatt
gctggatcccatgatcgattgttctttgaagactcagttgcatccctaaaagaattaagc
agtgacgtccttctcaagatctgcaacacagaatgcaagacaccagaactgattgatata
atcttccttgttgattcctctggaagtccaaataaagatggtttccgggaaatgacaaac
ttaatcaaatatacggtgagcaaatctgtggttggagaaaagcgggtacgatttggcgcc
atcacctactctgacaaccctcatttagagttcacactaaaacagtactatagtcaaact
gatattctgagggttatctcaaacctcaaagcttcaggaggacgcagaaacacagcccga
gccctgaagtatacactcaactactttgaggaaacacatggcggacgacgagcaaggaat
gttggccaagtgctattcctgataacagacggcaagattaatgacgtaagtggtctggca
acatggcctgaatccctggcaaattcagaggtcaacttttttgctattggtactgaagaa
gcagatgctgaacagctaaaggagattgtgggaaggaaaggaagagtgcactatgcaaaa
acatacaaggatctgcatggtctacaaaaacggatcacccgagagctctgcaatcttacc
aaaccaatttgtgagatggaggaatcagaccttgtttttttaattgatggatcagagtct
attcacgaacatagttggaatactctcaaaaaaaccatgattgacattgtgaaagagctg
gatattgctcaagacaaatggcgagtgggtgttgcccagttcagcgatatactcctgcat
caattttacctgaacacatacactagttttgcagaagtggaggaagctataaacaaaatt
agacaacgaaagcagggcacaagtacttgggacgccctgagaaatattcgatactacttc
acaaaagagaatggatccagaatagatgaaggagtagctcagaatctcctgctgatcaca
gatggaaaagctaatgatgacaaagacatgaatgcattagagtatctcagaaacaagaag
atatcaataactgccattgggatcggtgatgaaataaagaaatctgagctgcgtgaaata
gctggatcagctgatcgggtcattattgagacttttgaaggccttgaactgaagacaacc
ataaggaaagtgttacatttactctgtaaagacacaagaccactaccacaacccccacat
gattgtgatattgacattgcctttggatttgacgtgtccagacgaacaagcacacaaact
ctgttcagacctcaggtggaacagttggtttctgcagccatccatcgtatctccatgatg
ggtgatctgtgctgcatcgtaaaggacaagattacaactagatttggctataggcttgtg
tctgggacagatgggagtgttctggaagattttggctttgagaagtacagcgaggatgtg
gtggagaaagtgatgtcatggcgacctactgcacccctggacttcaacaagcttctgtta
gattccttcagagaaaagttagcctcttccaaagccaaggcaaaggttttgataatcttt
acagacgggctggatgataacattcagcgtttaatggcgagttcagagagacttaagcaa
agtggggtcagtgcactgctgattgtgtctttggagggaacagtagattatcaacagctg
gaatttggcagaggtttcagctacctgcagccactgaccatcaacatgctaaatttaggc
aacgctcttatgaaacaaattgaaacagtagcactgagggaatgctgcgatgtgccttgt
tcatgcactggtgtacctggaccacgaggaccccctggaaaaccgggtcaaaagggatac
actggtcagaagggtcatcctggatttccgggagatgaaggtagtatgggagagcgagga
ccaccagggctgaatggaactcagggacacaacggttgtcctggaaacagaggaataaag
ggccagagaggctacaatggaaataaaggagaagatggggacgatgggctggatggagtg
aatggagaacagggtgatgctggcttaaatgggcttccaggacctaaaggagacccgggc
agtgctggtgagaagggtttcagaggcagtcttggacctaagggacacggcggagtgaga
ggagatcctggtgcaccaggaagagacagcacaatttcaggtccgaaaggcgagagggga
gatactgggctcccgggtgaccagggcactactggaccctcaggcagacctggggataat
ggtgatcctggtgctccagggagaaaaggccgaccaggagcgccgggtgcatcttcaaat
gccaaaggagaagctggacagccagggcttcctggttatcctggacaagtgggaccacca
ggcccaaaggggtttcaaggagttggtggtcctccaggtgtacctggaattcagggtccc
tttggcccaactggacctgaaggttcaaaaggaggtcgaggacccagaggaccaaggggt
ccaccgggtgacccggggctcaagggatcacagggacccgagggattcaaaggacctctg
ggacaagatggaagagatgggtatggacctgcggggctcaaaggacacaagggaaacaat
ggatactttggcctccctggtttgcagggtgagcatggtaccaaaggatccagtggaagt
aaaggacataaaggttatcgaggaaaaccgggaaacacgggacgtccgggtactgaaggt
cctccaggagacaatgggatggatggacacaggggtgaaaaaggtcctcctggaatcaat
ccaatgcctgaatgtgacctggtcgaacacatacgaaaaaactgtccttgctgctccggt
aatggtacccagtgtccagtttaccccacagacctgttgatagctttggacatgtctgcg
ggtgtaactcctcaagttttccagcggatgcgttctgcggctctttccttattggaagac
atttccattgctgaaacaaactgtccacaaggagcacgggtgtctgtgatcgcctacaac
agcgagtccaggatcctgatccgtttcacagaccacctgaagaagaagacccttctggaa
gctgtaagaacattacctctagagagaaccacaaaaaccagaaacatcggacaagccatg
agctttgtttctcggaacatcttcaaacgtgtccgaagtggcaggttaatgaggaaagtg
gctgtgttcttcacaaacggtccgtcgagggatgactcgagccttgtaacagccatgctg
gagttcaaggctgcagacattggcctcggagtgatcgcctttagtcctgctgatgatgtg
acccgagcattgcaggttgatgacacgggaagctacattatcgttgatggcagaggagta
agtcgcattaagcagtgcatcatttgttttgatcgttgtaacccagacccagtgtgtggt
gtaattctgcggcctccacctctgcagatggatatggatatgtctgtgctgatggatggg
tctgataacgtgaacactcaacactatgcaaatatgaaggagcttctggtgtctctgttg
gaccggatcgatgtgagcagtgaaccgagcagagccgacagaaaaaccaggctgtccgtc
taccagcagagctccgtttatggctcatcttacatcaacgaggagttcagcttcactaaa
tataaagatcgcaatatcatgaagaggcatattaaagatacagtgaagcaagtgggcggg
acatcccaccctgactttgctttggagtggctgattactaacgttatccttaaagtagaa
agaccacgaagcaaacgaatggtcatggctgtttttggtgaagattttaagcacaacaaa
gctcagcttgattatttgtctagactgtgtaagtgtcagaatgttgtgatgtttattctc
atggcgggacagagattcgaccggacacagatggaggagctcaccagttctcctctggac
cagcacctggtgttcctggatgacagaggttatggcacacgcttcgcttacgccttcctg
catatgctccacaaaggaatcttaccccagtcattaatacctactcctgattgtcgtggg
tttgtggtgaggcctgttgaaactggaccacaaaccacagagagtgctattctgcccact
gaagagcccacagaagcgtccaccgaagagcccactgaagagcccaccgaagagctttat
gaagagctcactgaagagcccaccgaagagccttatgaagagctcactcaagagcccacc
gaagagccttatgaagagcccactgaagagcctaccgaagagccttatgaagagctcacc
gaagagcccacagaagaaccttataactattatggagatgagcaaaacaaagaatcattc
attgaagccagtcaatatgatgacactgatcaatatagaaaagagcacagaaaggacaaa
aaggacaaaaaggagccctccaaggctaaagcacgctgcttccttgagaaagattcaggc
cgtgtgtgtggatcgtatatgtccagatggtattacagccagcaaactaagaaatgcatg
cgcttctggtatggtggttgtggcggaaatgaaaaccgattcttgactgaggatgagtgc
tttaaggaatgtgtgtctacagaatctgaaaatcttcccaaggatgattccagtatcaag
gacatttgccagctcatacttgatgcaggaacttgctcaaacttttcagtgaaatggtac
ttcaacgtcagcagtggtgaatgtgtccagttctggtatggaggctgtgacgggaacagc
aacaggttcaacactcaggaggactgtgagattcgctgtctcagggacaaaaaaatatct
ccaaacgtctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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