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KEGG   Carassius gibelio (silver crucian carp): 127952683
Entry
127952683         CDS       T08819                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cgib04040]
    127952683
Ion channels [BR:cgib04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   127952683
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH Lustrin_cystein
Other DBs
NCBI-GeneID: 127952683
NCBI-ProteinID: XP_052407297
Position
B3:25722612..25755345
AA seq 1834 aa
MPKRKVNLMEVWRRNRADHPNRAKNLKLLPRQLAQLRDPEVVAALLQQNVKMASLLPPTG
ADVFRPFTLESLAEIERRMAEEAAEQEQMKAQNIEVPEEDLPKPTSDLEAGKPLPFIYGD
PPPNLLNVPLEELDPFYKAKKTFIVVTKGNTIYRFNAEPACYILSPFSPIRRVAIRILIH
SLFSMFIMLTILANCVFMTMGDPPEWSKIVEYVFTGIYTFEALVKVMSRGFCIGDFTFLR
DPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKL
ADVMILTVFCLSVFALIGLQLFMGNLRQKCVRSIGWSDSDNLTMLFNYTDINGTANSTFD
FQEYIDNPANHYYVPGQMDPLICGNNSDAGKCPEGYTCMKAGQNPNYGYTSYDNFAWAFL
ALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEAT
IAEAKEKEEEYAKILEQLKKQAEQKNNMINGSKTSLSSKKKDDDDQMQKDYDGIALKPLS
KSNGSKGSMNYLEVPDSQMRKPSAVSTTDNALDELEDTQRPCPPCWYKFADIFLKWDCCL
PWVKFKKLIYLFVMDPFVDLGITICIVLNTMFMAMEHYPMTPHFEHMLSVGNLVFTGIFT
AEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELSLADVHGLSVLRSFRLMRVFKLAKS
WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISEDCVLPRW
HMTDFFHSFLIIFRVLCGEWIETMWDCMEVAGQGMCIVVFMMVMVIGNLVVLNLFLALLL
SSFSGDNLSASDDEGEMNNLQIAVARITRGIDWVKAFVIGHLRKCLGLKPKEEGVKANEE
STSKITMNSGMSDVKVPIANAESDDDDDDDDGNSSSEDGDKEDIDKNTKKKDGDESSTCN
TVDKPPEVEEVVEEEEEDSTIPKDCYTENCLRRCPCLELDVTQGKGRTWWNFRKTCYAIV
EHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVIEMLLKWVAYG
FKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRV
VVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCYNMTSKERFPVDLVNNKSD
CLMLSEDDPSVRWMNSKVNFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRDVEKQPDYES
NLYIYTYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKIRGTDIFMTEDQKKYYNAMKKLG
AKKPQKPIPRPTNCCQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSAEKEYILFF
INFVFIVLFTGECILKITALRYHYFSIGWNIFDFVVVILSILGLLLVDLIEKYFVSPTLF
RIIRLARIGRVLRLTRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFGYV
KKEGGIDDMFNFETFGNSIICLFMITTSAGWDGLLAPILNSPPDCDPDVEHPGSPVRGNC
GSPAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFEMFYETWEKFD
PTASQFIAYSRLSEFCDTLKDPLRIAKPNTLKLITMDLPMVPGDKIHCLDILLALTTEVL
GDSDAMDAMKATMEEKFMANNPSKVSYEPITSTLRRKQEEVSASTIQRAYRKHVLKRGLK
HASYMYREKTDSKRQGEEVPEKVGMIAKKMSCLYGDQAIEDDKPKGFSLSQRGKPQHGGM
RPPVRVQSDVVLHSAPFPVPDSSATAENLRESIV
NT seq 5505 nt   +upstreamnt  +downstreamnt
atgcctaagcgaaaggtaaacctaatggaggtttggcgcaggaatcgtgctgatcatcca
aacagagctaagaacctaaaactattgccacgtcaactggcacaattgagagaccccgaa
gtggtggcagccctccttcagcagaatgtcaagatggcgagcctgctccctcccacaggt
gccgatgtgttccgccccttcactttggagtcgctggccgagatcgagcggcggatggca
gaagaggccgccgagcaggagcagatgaaggcccagaatatcgaggtacctgaggaggat
ctgcccaaacccaccagtgacttagaagcaggaaagcccctacccttcatctacggagac
cctccaccgaatctcctcaatgttcctttggaagagttggatccattctacaaagccaaa
aaaacgttcatcgtggtcaccaaaggcaatacaatataccgattcaatgctgagcctgca
tgctacattctaagtccattcagccctattcgacgagtggccataagaatactcatacat
tcattatttagcatgttcatcatgctaaccatcttggcaaactgcgttttcatgacgatg
ggtgaccctccagaatggagcaaaatagtggagtacgttttcacaggcatctacaccttt
gaggcgcttgtaaaggtgatgtccagaggcttctgcatcggtgacttcacattcctgcga
gatccgtggaactggctggattttatggtcatctccatggcgtacctcactgagtttgtg
gacttgggcaatgtatccgctctgaggactttccgtgttcttcgtgccctgaaaacaata
actgtaattccaggtcttaaaaccatcgttggggccttgattcagtcggtgaagaaattg
gcggatgtcatgatcctcactgtcttctgtctcagcgtgtttgctctcattggcctgcaa
ctgttcatgggaaatttgcggcaaaagtgtgtccggtctattggctggagcgacagtgat
aacctgaccatgctcttcaattacacagacatcaatggcactgccaacagcacattcgac
tttcaggaatatattgataacccagcgaaccactactatgtgcctggccaaatggatcca
ttaatatgtgggaacaactctgatgcagggaagtgccctgaagggtacacatgcatgaaa
gctggacaaaacccaaattatggctacactagttacgacaactttgcgtgggctttctta
gcccttttccggctaatgactcaagacttctgggagaacttgttccagttgacgctccgt
gctgcagggaagacatacatgatcttctttgtagtcatcatcttcttgggttcgttctac
ctcatcaatctgattctggctgtggtggccatggcgtatgctgaacagaacgaagccacc
attgcagaagctaaagagaaggaggaagagtatgcgaaaatcctggaacagctcaagaaa
caagctgagcagaagaacaacatgataaatggcagtaaaacatcactatccagcaaaaag
aaagacgatgatgaccaaatgcagaaggactatgacgggatcgcactgaagcccctctcg
aagtcaaatggatccaaaggtagcatgaattatttggaagtccctgactcgcagatgaga
aaaccgagtgcggtgagcaccacagacaatgctttagatgagctggaggatactcaaagg
ccgtgtcctccctgctggtacaagtttgcggacatattcctgaaatgggattgctgcttg
ccatgggtgaagttcaagaagctcatctacctatttgtaatggacccttttgtggatctg
ggcattaccatctgcattgtgctcaacaccatgttcatggctatggagcactatcctatg
actcctcatttcgaacacatgttgtcagtgggaaacctggttttcaccggtatcttcaca
gcagagatggtgctgaaactgatcgcactggacccgtattattacttccaagttggctgg
aacatttttgacagcataatagtgaccatgagtctggtggagttgagcttagctgatgtt
catggcttgtctgtgctgaggtccttccgtttgatgcgtgtgttcaagctggcaaaatct
tggccaaccctaaacatgctgataaagatcatcggtaactctgtaggtgctcttgggaat
ctgaccctcgtcttggccattattgtcttcatctttgctgtggtggggatgcagcttttc
ggaaaaagctatagggactgtgtgtgtaagatatcagaggattgtgtcctccctcgctgg
cacatgacagatttctttcactcgttcctcatcatctttcgtgttctgtgtggggaatgg
atcgaaacaatgtgggactgcatggaagtggctggccaaggcatgtgcatcgtcgtcttc
atgatggtcatggttataggaaacctagtggtgttgaacctcttcctggctctgctgctc
agctccttcagcggagacaacctgtcagcgtctgatgatgaaggggagatgaacaatctg
cagattgccgttgctagaattacaagaggcattgactgggtaaaggcctttgttatcgga
catttgagaaaatgtctgggcctgaagcctaaggaagagggtgtgaaagcaaacgaagaa
agcacttctaaaatcaccatgaattcgggtatgtccgatgtcaaagtgcctatagccaac
gctgaatcggatgacgatgatgacgatgatgatggcaacagctcttctgaggatggagac
aaagaggacatagataaaaataccaaaaagaaagatggagatgaatcctcaacctgcaac
acagtggacaaacctcctgaggtagaagaggtggtagaagaggaagaagaggactccacc
atccctaaagactgttacacagagaactgcctcaggcgatgtccttgcttggagcttgac
gtgacccaaggtaaagggaggacatggtggaatttccgtaaaacctgctacgccattgtg
gagcacagctattttgaaaccttcatcatcttcatgatcctcctcagcagtggagcatta
gcatttgaggacatatatattgaacagcgaagaatgattaaaatcatccttgaatatgca
gatcaggtcttcacttatgtgtttgtcattgagatgcttctgaaatgggtagcctatggc
ttcaaggtctatttcacaaacgcatggtgttggctggactttctcatcgttgatgtgtcc
ctgatcagtttgactgcgaatatcttaggttactctgaactgggggccattaagtctctc
aggactttgagagcgctgagacctcttcgagctctctccaggtttgaaggaatgagggtg
gtggtgaacgctctggtgggggccattccatccatcttcaacgttctcctggtctgcctg
atcttctggctcatcttcagcatcatgggagtcaacctttttgctggaaagttctcctac
tgctataacatgacatccaaagaacgttttccagtcgatctggtcaacaataagagtgac
tgtttaatgctctcagaggatgatccaagtgtgcgatggatgaattcaaaggttaatttt
gataacgtaggcatgggatacctctccttactgcaagtggcaacattcaaaggatggatg
gacatcatgtatagtgctgtggattcacgtgatgttgaaaagcagccagactatgagtcc
aacctctacatatacacttactttgtcatcttcatcatttttggctctttttttaccctc
aatctattcatcggtgtcatcattgacaatttcaaccaacaaaaggcaaagataagagga
actgacatcttcatgaccgaggatcagaaaaaatactacaatgccatgaagaaacttggc
gccaaaaagccacagaaaccaattccaaggcctacgaattgctgccaaggtttggtgttc
gacctggtcaccaagcagttctttgacatcttcatcatggtgatgatctgcctgaacatg
gtgaccatgatggtggagaccgatgaccagagtgcagagaaggaatatattctgtttttt
atcaacttcgtctttatcgtactcttcaccggggagtgtatactcaagatcactgccctg
cgctatcactacttttccattgggtggaacatttttgattttgtggtggtcattctttca
atattaggtcttttgctggtagatctcatcgagaagtactttgtgtcgcctacgctgttt
cgcatcatccgactggccagaatcggccgcgtcctgcggctcacccgcggcgccaaagga
atccggacgttactgttcgcgctgatgatgtcacttcctgccctcttcaacatcggcttg
cttctgttcttaatcatgttcattttctccatatttggcatgtccaacttcggctatgtg
aaaaaagaaggaggcatcgatgacatgtttaactttgagaccttcgggaacagcatcata
tgcttgttcatgatcacaacctcggccggctgggatggtttgctggcccctatactcaac
agcccaccagactgcgacccggatgtggagcacccgggatcgcctgtccgaggaaactgc
gggagccctgcggtaggcatcgtcttcttctgcagctacattgtcatgtccttcctcgtc
gtggtcaacatgtacatagccattatccttgaaaacttcaacgtggcgacagaagaaagc
agcgaccccttgtgcgaggacgactttgagatgttctacgaaacctgggagaagttcgac
cccaccgcctctcagttcatcgcttacagtagactgtccgagttctgcgacacgctgaaa
gaccccctgaggatcgcgaagccgaacacccttaagctgatcacaatggaccttcccatg
gtccccggtgataagatccactgtctggacatcctcctggccctcactacagaggtgctg
ggagattctgatgccatggatgccatgaaagcaactatggaggagaagttcatggccaac
aacccctcgaaggtttcgtatgagcccatcaccagcactctcagacggaagcaagaagaa
gtgtccgcttcgaccattcaaagagcctaccgcaagcacgtcctcaaacgcggcctcaaa
cacgcctcgtatatgtacagagagaagacggactcgaagagacaaggtgaagaggtgcca
gaaaaagtggggatgatagctaagaaaatgagttgtctgtatggagatcaagccattgaa
gacgacaaacctaagggtttctccctctctcaacgtgggaagccacaacatggggggatg
cgtcccccggtgagagttcagagcgatgtggtcttgcactctgcccctttccccgttcct
gactcctcagccactgcggaaaacttgagggagtccattgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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