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KEGG   Cyprinus carpio (common carp): 109045040
Entry
109045040         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha A-like
  KO
K04837  voltage-gated sodium channel type IV alpha
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ccar04040]
    109045040
Ion channels [BR:ccar04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   109045040
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc IQ_SCN5A_C VEFS-Box IQ PKD_channel
Other DBs
NCBI-GeneID: 109045040
NCBI-ProteinID: XP_018918470
Position
40:complement(22211631..22219158)
AA seq 958 aa
MASVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRITRGIDWLKSFIASMLRQILG
KKPPDNNKGGGEEDIVLCAINHLDEGKMADGLTNCLPPALTVPIARCESDVEEDEDSDES
SDEEDWKAKERKKALEAFEDINIERRRVIKIILEYADKVFTYIFIVEMLLKWVAYGFKTY
FTNAWCWLDFLIVDVSLVSLTANLLGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNA
LVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTEERFPMDVVNNKSDCMAL
MHTNEARWSNVKVNYDNVGLGYLSLLLPLFTATFKGWMDIMYAAVDSREVEEQPSYEINL
YMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKFGGKDIFMTEEQKKYYNAMKKLGSK
KPPKPIPRPSNKIQGVVFDFITKQFFDIFIMVLICLNMVTMMIETDDQSAEKEDILYQIN
LFFIIIFTGECILKMFALRHYFFTIGWNVFDFVVVILSIAGLMLSDIIEKYFVSPTLFRV
IRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKK
QAGIDDIFNFETFGGSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIENPGTDVRGNCG
NPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNVAQEESGDPLCEDDFTMFDETWEKFDV
DGTQFIEYSRLFDFVDALQEPLRIAKPNRLKLITMDLPIVTGDKIHCLDILLAVTREVLG
DTIEMAAMKVSIEAKFTLNNPTSASFEPINTTLRRKEEVRAAIVVQRTYRRHLLKRAIRY
ACFMHRSKRKVRSQNIKTSETEGXLQGNGCLYGSNPELAMALELQARPMPPNAQPRCHLM
HSPNPTSVMQHRVSVIYPPPQGQLKLPVELTSEAILQSAPMRHGFCSLENATIKESIV
NT seq 2877 nt   +upstreamnt  +downstreamnt
atggcaagtgtactgaacctgttcctggctctgctgctcagctccttcagcggggataac
ctgtctggaggtgatgatgatggtgagatgaacaaccttcagatcgccattggtcgcatc
accaggggtatagattggctcaaatccttcatcgccagtatgttgcgccagattctagga
aagaaacctcctgacaataataaaggaggaggggaagaagacatagtactgtgtgcaata
aaccacctggatgaggggaaaatggcagatggcttgaccaactgtttgcctccagcgctg
actgtacctattgctcgttgtgagtctgatgttgaagaggatgaggactccgatgaatct
tctgatgaggaggactggaaagcaaaagaaagaaagaaagcattagaggcttttgaggat
atcaacatcgagcgccgcagagtgatcaagattattctggagtatgctgataaagtcttt
acatacattttcatagtggagatgttactaaagtgggtggcatatggtttcaagacttac
tttactaatgcgtggtgttggctggacttcctcattgttgatgtgtcactagtcagttta
acagccaatttattgggatattctgagttgggagcaatcaaatctctcagaacactcagg
gctcttcgaccacttcgagccctgtcaagatttgaaggaatgagagtggtagtgaatgca
ctggttggtgccattccctctattttcaatgtgctgctggtgtgtctgatattctggctc
atcttcagcatcatgggagtcaatctgtttgctggaaagttctaccactgcatcaacacc
accacagaggaacgcttccccatggatgtggtcaacaacaagagtgactgtatggccctg
atgcacaccaatgaggcgcggtggtcgaatgtgaaggtcaactatgacaatgtgggactc
ggctacctctctttactgctacctctctttactgccacatttaaagggtggatggatatc
atgtatgctgcagtagattctagagaggtggaagagcagccatcatatgagatcaacctt
tacatgtacctatattttgttattttcataatttttggatcctttttcactctcaacctc
ttcattggtgtcatcatcgacaacttcaatcagcagaaggcaaagtttggaggtaaagac
attttcatgacagaggagcaaaaaaagtactacaatgccatgaagaagttgggttccaaa
aaacctccaaaacctatccctaggccatcgaataagatccagggtgtggtgtttgacttc
ataacaaaacagttctttgacatctttatcatggtgcttatctgcctcaatatggtgacc
atgatgatagagacagatgaccagagtgctgagaaagaggatatcctgtaccagatcaat
ttgttcttcatcatcatcttcacaggagaatgcatacttaagatgtttgcgctcagacat
tactttttcactattggctggaacgtctttgattttgttgtggtcatcctttctatagca
ggtctgatgttatcagacatcattgagaagtactttgtgtctcccaccttgttccgtgtc
atccggctcgccagaatcggccgtgtgctacgtctcatcagaggggcaaaaggcattagg
actcttttgtttgccttgatgatgtcacttcctgcactcttcaacatcggactgcttctg
ttcctcattatgttcatcttctccatctttggcatgtctaactttgcctatgtaaaaaag
caggcaggcattgacgatatcttcaactttgaaacatttggtggcagcatcatctgcctg
tttgagatcacaacctcggcaggctgggatgggcttttgctgcctattctgaacagcggc
cctccagactgtgaccctgacatagagaaccctggtacagacgttaggggtaactgtggg
aatcctggcatgggtatcatgtttttctgcagttacatcatcatgtcgttcctggtggtc
gtgaacatgtacattgctataattcttgaaaacttcaacgttgctcaagaggagagtgga
gacccactctgtgaggatgactttacgatgtttgacgagacatgggaaaagtttgatgtt
gatggtacacagtttattgagtacagccgcttgtttgacttcgtcgatgccttgcaggag
cctttgcgaattgccaaacccaaccgccttaaactaatcaccatggatctacccattgta
actggtgacaaaatccactgtctggatattcttttggcagttacccgtgaggttcttggc
gacacgattgagatggctgccatgaaggtgagcattgaagccaagttcacattgaataat
cccacatctgcctcctttgagccaatcaacaccactctcaggaggaaagaggaagtgcgt
gcagccattgtggttcaacgcacataccgtagacatctcctcaaacgtgctattcggtat
gcatgcttcatgcatcgttcaaagaggaaagtcaggagtcaaaacataaagacctccgaa
accgagggttaattgcaaggaaatggatgcctgtatggcagcaatccagaacttgccatg
gctcttgagctgcaggctaggccgatgccacctaatgcacagccccgatgccacctaatg
cacagccccaatcccacctcggtcatgcagcacagagtatccgtaatctaccctccacca
cagggacaactcaaacttccagtggaactcacaagtgaggcgatcctccagtctgcaccc
atgaggcatggcttctgcagtttagagaatgcaacaataaaagagtcaatagtataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (11)   

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