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KEGG   Carassius auratus (goldfish): 113114593
Entry
113114593         CDS       T07313                                 
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03320  PPAR signaling pathway
caua04148  Efferocytosis
caua04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    113114593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113114593
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:caua03310]
    113114593
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    113114593
Nuclear receptors [BR:caua03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   113114593
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 113114593
NCBI-ProteinID: XP_026137256
Ensembl: ENSCARG00000002210
UniProt: A0A6P6QVR6
Position
2:complement(7328787..7346853)
AA seq 441 aa
MDNNDTYLHFSSSLQVTHGHLSSPPSQPPLGSLVSHHHPSIINGLGSPYSVITSSSLGSP
SASMPTTSNMGYVALNSPQMNSMNSVSSSEDIKPPPGLVGPGSYSCSSPGSLSKHICAIC
GDRSSGKHYGVHSCEGCKGFFKRTIRKDLTYTCRENKDCQIDKRQRNRCQYCRYQKCLAM
GMKREAVQEERQRGREKSDNEVESSSSFNEEMPVEKILDAELAVEPKTDAYIESSTGNST
NDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVK
DGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAK
GLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQIT
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggataataacgacacatatctgcattttagttcttctttgcaggtaacacatggtcac
ctgagctcccctccatcccagcctcctctcggctccctggtgtcccaccatcacccctcc
atcatcaacggtctagggtcgccatactcagtcatcacttcttcctccctgggctcaccc
tcagcctccatgcccactacctccaacatgggctatgtagcgctcaacagtccacagatg
aactctatgaacagtgttagcagttcagaagacattaaacctcctccaggactggtggga
ccgggcagttactcctgcagcagcccgggatccctgtccaaacacatctgtgccatctgt
ggagaccgatcctcagggaaacattatggtgttcacagctgtgaaggatgcaagggcttc
ttcaagagaaccatccggaaagaccttacatacacgtgtcgagaaaataaagactgccag
atcgacaagcgccagcgtaaccgctgccagtactgccgctatcagaagtgtctagccatg
ggcatgaagagagaagcggtgcaggaagagaggcagcgcggtcgggaaaagagtgataat
gaggtggagtctagcagcagctttaatgaggagatgccagtggagaagatcctggatgct
gagcttgcagtggagcccaagactgacgcttacattgagtccagcacaggcaactcgaca
aatgacccagtgaccaacatctgccaggctgcagacaagcagctctttactcttgtggag
tgggctaagagaatcccgcacttctctgaccttcctctggatgaccaggtcatcctgctg
cgagcaggttggaacgagctgctcattgcttcattctcacaccgttctgtgacggttaaa
gacgggatccttttggccactggcctgcatgtccaccgcagcagtgctcacagcgcaggg
gtcggctctatatttgacagggtattaacagagctggtgtctaagatgaaggacatgcag
atggacaagacggagctgggctgtctaagagctatcgtcctctttaaccccgatgctaaa
ggattgtcaaacccgtcagaggtcgaggcattacgggaaaaagtgtacgcttcactggag
ggctacaccaaacacaactaccccgaccagcccggcaggtttgccaagctgctcctccgt
ctgcccgctctgcgctccataggactgaagtgcctggagcacctgttcttcttcaaactt
atcggagacacacctatagacactttcctcatggagatgctggaagcgccgcatcaaatc
acatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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