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KEGG   Carassius auratus (goldfish): 113045801
Entry
113045801         CDS       T07313                                 
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like
  KO
K08524  retinoid X receptor alpha
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03320  PPAR signaling pathway
caua04148  Efferocytosis
caua04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    113045801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113045801
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:caua03310]
    113045801
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    113045801
Nuclear receptors [BR:caua03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   113045801
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 113045801
NCBI-ProteinID: XP_026062250
Ensembl: ENSCARG00000010287
UniProt: A0A6P6JRL8
Position
27:20154831..20172233
AA seq 448 aa
MFQIAHPMLPVVSLMLQGSSLQVTHGHLSSPPSQPPLSSMVSHHHPSIINGLGSPYSVIT
SSSLGSPSASLPTTSSMGYGALNSPQMNPMNSVSSSEDIKPPPGLTGLGSYPCSSPGSLS
KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLSYTCRDCKDCQIDKRQRNRCQYCR
YQKCLAMGMKREAVQEERQRGREKSDNEVESSSSFNEEMPVEKILDAELAVEPKTEAYME
SSTGNSRNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFS
HRSVTVKDGILLATGLHVHRSSAHTAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIV
LFNPDAKGLSNPSEVEALREKVYASLEAYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLE
HLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgttccagatcgctcaccccatgctcccggttgtgtcactcatgctccaaggttcttct
ttgcaggtaacacacggtcacctgagctctcctccgtcccagcctcctctcagctccatg
gtgtcccaccatcacccctccatcatcaacggtctagggtcgccatactcggtcatcact
tcctcctctctgggctcaccttcagcctccttgcccaccacctccagcatgggctatgga
gcgctcaacagtccacagatgaaccctatgaacagtgttagcagctcagaagacattaaa
cctcctccagggctgacgggactggggagttacccctgcagcagcccggggtccctctcc
aaacacatctgtgccatctgtggagaccgatcctcggggaaacactatggtgtttacagc
tgtgaaggatgcaagggcttcttcaagagaactatccggaaagatctctcgtacacgtgt
cgagactgtaaagactgccagattgacaaacgccagcgtaaccgctgccagtactgccgc
tatcagaagtgtctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgg
ggtcgggaaaagagtgataatgaggtggagtctagtagcagctttaatgaagaaatgcca
gtggagaagattctagacgctgaacttgcagtggaacccaagactgaggcttacatggag
tccagcacaggcaactcgaggaatgacccagtgaccaacatctgccaggctgcagacaag
cagctctttactcttgttgagtgggctaagagaatcccgcacttctcggaccttcctctg
gatgaccaggtcatcctgctgcgagcaggttggaacgagctgctcatcgcttcattctca
catcgttctgtgacggttaaggatgggatcctcttggccaccggcctgcacgtccatcgc
agcagcgctcacaccgcaggggtcggctctatatttgacagggtattaacagagctggtg
tctaagatgaaggacatgcagatggacaagacggagctgggctgtctaagagctatagtc
ctctttaacccagatgcaaaaggattgtcaaacccatcagaggtcgaggcattacgggaa
aaagtgtacgcttcactggaggcctacaccaaacacaattaccctgatcagcccggcagg
tttgccaagctgctcctccgtctgcccgctctgcgctccataggactgaagtgcctggag
catctgttcttcttcaaactcatcggagacacacctatagacactttcctcatggagatg
ctggaggcgccgcatcaaatcacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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